BAC Information

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BAC

Clone NameB6Ng01-100L03
Chromosome12 (Build37)
Map Location 7,211,907 - 7,213,061
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC238049, LOC100042118
Downstream geneLOC668380, EG668388, Apob
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-100L03.bB6Ng01-100L03.g
ACCDH910119DH910120
length1,1631,140
definitionDH910119|Mus musculus domesticus DNA, BAC clone: B6Ng01-100L03, 5' end.DH910120|Mus musculus domesticus DNA, BAC clone: B6Ng01-100L03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgggcatttgtcacagtaacggaaaaaagtgtaactgttcgcat
tgctgttactgttcgcattgcttttcccaactacctacatgacacacgtt
aagagaagggtttgcctttatcttaacttcaaagtttatcttaagtctaa
gtttatcttaggcttaaaactggagccaggtggtggtggcgcacaccttt
aaccccagcacttgggaggcagaggcaggctgatttctgagttcgaggcc
agcctggtctacagagtgagttccagggctacacagagaaactgtgtctc
gaaaaaaaccaaaccgaaccaaaccaaaccaaaccaaaacaaaacaaaac
aaaaaaactggatctagtccatcatgattagagaggcaaggcagcaggat
cttgaggcagaccatagagttgtgacccaaagagtaagcaggaagtagga
ctgggctatcacacatcaaggaccagccatgtttattcacttccttcagc
aaaacttcactgtcataaagattctacaaccttctaaaataatgccacaa
gttaataatcaagtacttaaacctgtgggagtcacttcccaatcaaaggt
tgatagtacttaaattgtagaagaacaagaatcaaagactatcaaatttg
cagagtttagactatagacctaagaaaatgtagtatgtgtgtggagaggg
attactggagtgatgtcccagtggctaatggaatttactgctcttccaga
gtaccatgttctatgttgattcccagcactcaaatggttcataaccctct
gtaactccagaggatcagatacctctagcctctgcaaacacctgcacccc
tgtgttcatattcacgtgaagacacttatgatatgtatattaaaaatcat
aaaaaaaattcctaaaaacttagtgaaaatatttggctatatacatgagt
gtgctaaagctcagatagttaagtgactactccattatccatctagttta
tgaaagataaaagcaatatgaaaagctgtaagtttttccctgtctggagc
ctttttctctttaagtattacaagcaaatgtctcacttgcatttgggaaa
gttctgtaactataaatcgatttgccttaattagaaggaaagagtgaact
gtggacagggatt
gaattcttataacttcctaggtttaagattctatgtgcatctcttgttgt
cctttgctcttctatgctgcaaattcaatctctgatatagtgcaaatttc
ttgagattttctgtctgtttactttagttttttttttcttttaccaaaaa
tctccatcaaccacagcttctgtatttggcaaaagagcatgcccccaccc
tcatgaattagggaaaatgaaacattccaagataaacagaaggaatgttt
tactgaagaaatgttcaattttctccaggaaatttttactgaaccttttc
aggttcaagtgaaatacacaagagccatatgaaataaacaatggaagaga
acaagtctgaactatgaacaacagagtgttgggatgctatcctgtatcaa
ctcatctcagaaagttactgaatacgatccttactggtacaaacgaaata
gccatggagtactcacaaaggaatgagaaagaaataaggacatttcacaa
ctatcaattgggtatgtagtaagatgcataaaagggaaaaaaagccaaac
taacaaagcaagtatgctataagacatagataaagtgaatatagaaacag
tttcttattgatatttagttgggtacatgtgcaagtttaaattattcaag
aaaaaacaaagattgtataaaatggtaaatactgtgtctaaaaaacagca
atttttgtaaggagacacaaactatactgtaaaatgttgaaacaagacat
ttctccaaaatatgaccaaacagagcagggtagcagtaggaatattagat
aaaataaattttgagtatttaaaaaaaggaaagaaaaacttatgagagaa
aggcatatatgtaataaaatattcaacacagtaagagggtataatcctta
gaaatattttacatagttaacagcaggccatatgatatataacaaataac
taatctgaaggcaaaaatgagaaaattagtgtgaaattgcagtatctttc
cccttcattatagatgagcaaggagaaaaaataattagaagcagagattc
ttagcaacaataaggccactttatctacagacattatttagagcattgcc
acatgaaggaagttacccaggtaaagaacctaacttacac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_7211907_7213061
seq2: B6Ng01-100L03.b_46_1208

seq1  GAATTCTGGGCATTTGTCACAGTAACGGAAAAAAGTGTAACTGTTCGCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGGCATTTGTCACAGTAACGGAAAAAAGTGTAACTGTTCGCAT  50

seq1  TGCTGTTACTGTTCGCATTGCTTTTCCCAACTACCTACATGACACACGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTTACTGTTCGCATTGCTTTTCCCAACTACCTACATGACACACGTT  100

seq1  AAGAGAAGGGTTTGCCTTTATCTTAACTTCAAAGTTTATCTTAAGTCTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAAGGGTTTGCCTTTATCTTAACTTCAAAGTTTATCTTAAGTCTAA  150

seq1  GTTTATCTTAGGCTTAAAACTGGAGCCAGGTGGTGGTGGCGCACACCTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATCTTAGGCTTAAAACTGGAGCCAGGTGGTGGTGGCGCACACCTTT  200

seq1  AACCCCAGCACTTGGGAGGCAGAGGCAGGCTGATTTCTGAGTTCGAGGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCCAGCACTTGGGAGGCAGAGGCAGGCTGATTTCTGAGTTCGAGGCC  250

seq1  AGCCTGGTCTACAGAGTGAGTTCCAGGGCTACACAGAGAAACTGTGTCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGGTCTACAGAGTGAGTTCCAGGGCTACACAGAGAAACTGTGTCTC  300

seq1  GAAAAAAACCAAACCGAACCAAACCAAACCAAACCAAAACAAAACAAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAACCAAACCGAACCAAACCAAACCAAACCAAAACAAAACAAAAC  350

seq1  AAAAAAACTGGATCTAGTCCATCATGATTAGAGAGGCAAGGCAGCAGGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAACTGGATCTAGTCCATCATGATTAGAGAGGCAAGGCAGCAGGAT  400

seq1  CTTGAGGCAGACCATAGAGTTGTGACCCAAAGAGTAAGCAGGAAGTAGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGGCAGACCATAGAGTTGTGACCCAAAGAGTAAGCAGGAAGTAGGA  450

seq1  CTGGGCTATCACACATCAAGGACCAGCCATGTTTATTCACTTCCTTCAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCTATCACACATCAAGGACCAGCCATGTTTATTCACTTCCTTCAGC  500

seq1  AAAACTTCACTGTCATAAAGATTCTACAACCTTCTAAAATAATGCCACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTTCACTGTCATAAAGATTCTACAACCTTCTAAAATAATGCCACAA  550

seq1  GTTAATAATCAAGTACTTAAACCTGTGGGAGTCACTTCCCAATCAAAGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATAATCAAGTACTTAAACCTGTGGGAGTCACTTCCCAATCAAAGGT  600

seq1  TGATAGTACTTAAATTGTAGAAGAACAAGAATCAAAGACTATCAAATTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGTACTTAAATTGTAGAAGAACAAGAATCAAAGACTATCAAATTTG  650

seq1  CAGAGTTTAGACTATAGACCTAAGAAAATGTAGTATGTGTGTGGAGAGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTTTAGACTATAGACCTAAGAAAATGTAGTATGTGTGTGGAGAGGG  700

seq1  ATTACTGGAGTGATGTCCCAGTGGCTAATGGAATTTACTGCTCTTCCAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTGGAGTGATGTCCCAGTGGCTAATGGAATTTACTGCTCTTCCAGA  750

seq1  GTACCATGTTCTATGTTGATTCCCAGCACTCAAATGGTTCATAACCCTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCATGTTCTATGTTGATTCCCAGCACTCAAATGGTTCATAACCCTCT  800

seq1  GTAACTCCAGAGGATCAGATACCTCTAGCCTCTGCAAACACCTGCACCCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACTCCAGAGGATCAGATACCTCTAGCCTCTGCAAACACCTGCACCCC  850

seq1  TGTGTTCATATTCACGTGAAGACACTTATGATATGTATATTAAAAATCAA  900
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TGTGTTCATATTCACGTGAAGACACTTATGATATGTATATTAAAAATC-A  899

seq1  TAAAAATAAATTCCTAAAAACTTAGTGAAAATATTTGGCTATATACATGA  950
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAA-AAATTCCTAAAAACTTAGTGAAAATATTTGGCTATATACATGA  948

seq1  GTGTGCTAAGGCTCAGATAGTTAAGTGACTACTCCATTATCCATCTAGTT  1000
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCTAAAGCTCAGATAGTTAAGTGACTACTCCATTATCCATCTAGTT  998

seq1  TATGAAAGATAAAAGCAATATTGAAAAGCTGT-AGGTTTTCCCTGTCTGG  1049
      |||||||||||||||||||| ||||||||||| || ||||||||||||||
seq2  TATGAAAGATAAAAGCAATA-TGAAAAGCTGTAAGTTTTTCCCTGTCTGG  1047

seq1  AGCCTTTTTCTCTTT-AGTA-TAC-AGC-AATGTCTCAC-TGCATTTGGG  1094
      ||||||||||||||| |||| ||| ||| |||||||||| ||||||||||
seq2  AGCCTTTTTCTCTTTAAGTATTACAAGCAAATGTCTCACTTGCATTTGGG  1097

seq1  AAAGGTCTGTACCTATTAATCAGTTTTGCTACATAAGA--GAAAGA-TGA  1141
      |||| |||||| |||| ||||  |||  ||  || |||  |||||| |||
seq2  AAAGTTCTGTAACTATAAATCGATTTGCCTTAATTAGAAGGAAAGAGTGA  1147

seq1  AC--TGGACAGGGATT  1155
      ||  ||||||||||||
seq2  ACTGTGGACAGGGATT  1163