BAC Information

Click to search

BAC

Clone NameB6Ng01-100O15
Chromosome12 (Build37)
Map Location 85,750,678 - 85,905,588
singlet/doubletdoublet
Overlap gene2900006K08Rik, Rnf113a2, Aldh6a1, Lin52
Upstream geneDpf3, Wdr21, Zfyve1, LOC626950, Rbm25, Psen1, Papln, Numb, LOC100042325, 2410016O06Rik, Acot2, Acot1, Acot4, Acot3, Acot5, LOC666963, Acot6, Dnalc1, Pnma1, C130039O16Rik, EG432676, Zadh1, Zfp410, 9830169C18Rik, Coq6, Entpd5
Downstream geneChx10, Abcd4, 7420416P09Rik, Tmem90a, Npc2, Isca2, Ltbp2, 1110018G07Rik, Fcf1, Ylpm1, Prox2, Dlst, Rps6kl1, LOC100042021, Pgf, Eif2b2, Mlh3, Acyp1, 2810002I04Rik, Nek9, Tmed10, LOC100042549, LOC667119, Fos, EG667124
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-100O15.bB6Ng01-100O15.g
ACCDH910269DH910270
length9781,115
definitionDH910269|Mus musculus domesticus DNA, BAC clone: B6Ng01-100O15, 5' end.DH910270|Mus musculus domesticus DNA, BAC clone: B6Ng01-100O15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(85,750,678 - 85,751,658)(85,904,483 - 85,905,588)
sequence
gaattctctggagacaagttaagtaacacacacctctggtcgcattgctc
tggaggctgaggcagggagatcacagccactgctacatatggagacctcg
tctttaaaaacaagtctgagtgtagttcagtgatagagtgcttcttgtgc
agggtcctaggtaccatctccagcaaagtaacttaagagagtaactttct
ttttaaaaaagatttgtttatttttatttatatgcatacactgtatgctg
tctttaggcacactccagaagatcccattacagatggttgtgagccacca
tgtggttgctgggagttgaactcagaacctctggaagaacagtcagtgct
cttaatctctgagctatctctccagctctgtaccacagtgttttgttaat
gctggtgcaatctttatttcaaaggactttaccttttgaatccatcctag
ggccttgatgtatacttaccatgcattctacttctacttctacctgatac
atgcataccatgcactctaactttacctgatgtatgcataccattcagtc
ttcttcttcctaatgtatgcttattatacattctacttctacctgatgta
tgcttactgtacattctgcttctacatgtctacattcccaaggtcttact
ttttttttcccccatctctgcatcaatgactatggtgtgtgtttttcagg
catccttaaagcctgggataatgtgttaccaacaattgaaagtacttaac
atgaagtacttaccaacaaatgaagtacttaacatacctgccccaagtaa
acctgattcctttgtctagaactaagcaaaacataacaatagcaacaaag
gctgtggagaggacagtatacaacaattgtgtcttgtgtagaactgagac
ccaggctcacaactgagtgaagaggagaaggattgcaagcccttgcctag
catgctcgagcctgggtctgaatactca
gaattcaggaggcagaggtaggaagattacacattcaaggtcatttttgg
ctccacagcaagttttcggccagactgtgccacatgagaccctggttcaa
cccttgcacctaacaagccttcattgaggacagagagagaaagattgtcc
ccaaagcttgggctagatcttgagagaagtgaagtgccctttcagagaca
cgcaatctgatcacagtggattcaaatcttggctctgcttggatccagtc
atttaacttcagccacttaaactgcaaaataactacatcagagttatatc
taggcatggcggcaggtctgttagtctcagcgcttgagaagttgaggcaa
gaggattgccacaagttcaaggccagggcaggagtcggcctcaacaaaat
aaaacaatccaacaacaaaacaggccaaccaaccagacaacccagagcta
aatgcgttccctgaccctgaatccacacagaggtcaagggcatgcgttag
agttaggctgcctgcatgcattttggcctctgctctagagtttgccaagt
aacattgggaaagccatccagactccctgtgcctttagtctcttcagcca
caaaatggggatgataataaaaccagtccctcggggtcatcattatgatt
aaatatctgcctaccgaacactcagcattaaaagactgcaaaataaggcc
gcagggagaattcaccaggactaaaccacgtaggaagaccctgctggact
ggggatgcggccagagcatagatctagctcttgccctcatcaaaactgag
cccacgatggaagggggtgggtattctttaaaattaaaaatatgtacatg
aggggcttgcctgcatgtatgtgtgtgtgtgtcttcatatagggtttggt
gcctgaagaagttagaagaggggtgttgggatctcctgggaactggagtt
acagacagttgtgagctgccatgtgggtgctgggggacaaattgtgaacc
cctcagagaggcagcaggtgcttctaactgcagaagccatctttctgtcc
ccagagtggtagtcttaaaaccagttagacatggggactggttgggggct
caattcttaacagcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_85750678_85751658
seq2: B6Ng01-100O15.b_45_1022

seq1  GAATTCTCTGGAGACAAGTTAAGTAACACACACCTCTGGTCGCATTGCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGGAGACAAGTTAAGTAACACACACCTCTGGTCGCATTGCTC  50

seq1  TGGAGGCTGAGGCAGGGAGATCACAGCCACTGCTACATATGGAGACCTCG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGCTGAGGCAGGGAGATCACAGCCACTGCTACATATGGAGACCTCG  100

seq1  TCTTTAAAAACAAGTCTGAGTGTAGTTCAGTGATAGAGTGCTTCTTGTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTAAAAACAAGTCTGAGTGTAGTTCAGTGATAGAGTGCTTCTTGTGC  150

seq1  AGGGTCCTAGGTACCATCTCCAGCAAAGTAACTTAAGAGAGTAACTTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTCCTAGGTACCATCTCCAGCAAAGTAACTTAAGAGAGTAACTTTCT  200

seq1  TTTTAAAAAAGATTTGTTTATTTTTATTTATATGCATACACTGTATGCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAAAAGATTTGTTTATTTTTATTTATATGCATACACTGTATGCTG  250

seq1  TCTTTAGGCACACTCCAGAAGATCCCATTACAGATGGTTGTGAGCCACCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTAGGCACACTCCAGAAGATCCCATTACAGATGGTTGTGAGCCACCA  300

seq1  TGTGGTTGCTGGGAGTTGAACTCAGAACCTCTGGAAGAACAGTCAGTGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTTGCTGGGAGTTGAACTCAGAACCTCTGGAAGAACAGTCAGTGCT  350

seq1  CTTAATCTCTGAGCTATCTCTCCAGCTCTGTACCACAGTGTTTTGTTAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATCTCTGAGCTATCTCTCCAGCTCTGTACCACAGTGTTTTGTTAAT  400

seq1  GCTGGTGCAATCTTTATTTCAAAGGACTTTACCTTTTGAATCCATCCTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGTGCAATCTTTATTTCAAAGGACTTTACCTTTTGAATCCATCCTAG  450

seq1  GGCCTTGATGTATACTTACCATGCATTCTACTTCTACTTCTACCTGATAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTGATGTATACTTACCATGCATTCTACTTCTACTTCTACCTGATAC  500

seq1  ATGCATACCATGCACTCTAACTTTACCTGATGTATGCATACCATTCAGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATACCATGCACTCTAACTTTACCTGATGTATGCATACCATTCAGTC  550

seq1  TTCTTCTTCCTAATGTATGCTTATTATACATTCTACTTCTACCTGATGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTTCCTAATGTATGCTTATTATACATTCTACTTCTACCTGATGTA  600

seq1  TGCTTACTGTACATTCTGCTTCTACATGTCTACATTCCCAAGGTCTTACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTACTGTACATTCTGCTTCTACATGTCTACATTCCCAAGGTCTTACT  650

seq1  TTTTTTTTCCCCCATCTCTGCATCAATGACTATGGTGTGTGTTTTTCAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTCCCCCATCTCTGCATCAATGACTATGGTGTGTGTTTTTCAGG  700

seq1  CATCCTTAAAGCCTGGGATAATGTGTTACCAACAATTG-AAGTACTTAAC  749
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CATCCTTAAAGCCTGGGATAATGTGTTACCAACAATTGAAAGTACTTAAC  750

seq1  ATGAAGTACTTACCAACAAATGAAGTACTTAACATACCTGCCCCAAGT-A  798
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  ATGAAGTACTTACCAACAAATGAAGTACTTAACATACCTGCCCCAAGTAA  800

seq1  ACCTGA-TCCTTTGTCTAAGAACTAAGCAAAACAAAACAATAGCAACAAA  847
      |||||| |||||||||| |||||||||||||||| |||||||||||||||
seq2  ACCTGATTCCTTTGTCT-AGAACTAAGCAAAACATAACAATAGCAACAAA  849

seq1  GGCTGTGGAGAGGACAGATATACAACAATTGTGTCTTCGTGTAGAACATG  897
      ||||||||||||||||| ||||||||||||||||||| ||||||||| ||
seq2  GGCTGTGGAGAGGACAG-TATACAACAATTGTGTCTT-GTGTAGAAC-TG  896

seq1  AGACCCAGGCTCACAACTGAGTGAAAGAGGAGAAAGGATTGCAGAGCACT  947
      ||||||||||||||||||||||| |||||||| |||||||||| ||| ||
seq2  AGACCCAGGCTCACAACTGAGTG-AAGAGGAG-AAGGATTGCA-AGCCCT  943

seq1  TGCCTAGCATGCTCGAGCCTGGGTCTG-ATACTCA  981
      ||||||||||||||||||||||||||| |||||||
seq2  TGCCTAGCATGCTCGAGCCTGGGTCTGAATACTCA  978

seq1: chr12_85904483_85905588
seq2: B6Ng01-100O15.g_70_1184 (reverse)

seq1  GGCTGTAATGAATTGAGCCCCCAAACCAGGTCCCATG-CTAACT-GTTTT  48
      |||||| | ||||||||||||| ||||||  |||||| |||||| |||||
seq2  GGCTGTTAAGAATTGAGCCCCC-AACCAGTCCCCATGTCTAACTGGTTTT  49

seq1  AAGACTTCCCACTCTGGGGCAGGAGAGATGGC-TCTGCAGTTAGAAGCAC  97
      ||||| | |||||||||||   || ||||||| |||||||||||||||||
seq2  AAGAC-TACCACTCTGGGGACAGAAAGATGGCTTCTGCAGTTAGAAGCAC  98

seq1  TTGCTGCCT-TCTGGAGGGGTCCACAATTTGT-CCCCAGCACCCACATGG  145
       |||||||| ||| ||||||| |||||||||| |||||||||||||||||
seq2  CTGCTGCCTCTCT-GAGGGGTTCACAATTTGTCCCCCAGCACCCACATGG  147

seq1  CAGCTCACAACTGTCTGTAACTCCAGTT-CCAGGAGAT-CCAACA-CCCT  192
      |||||||||||||||||||||||||||| ||||||||| |||||| ||||
seq2  CAGCTCACAACTGTCTGTAACTCCAGTTCCCAGGAGATCCCAACACCCCT  197

seq1  CTTCTAACTTCTTCAGGCACC-AAGCCTATATG-AGACACACACACACAT  240
      ||||||||||||||||||||| || |||||||| ||||||||||||||||
seq2  CTTCTAACTTCTTCAGGCACCAAACCCTATATGAAGACACACACACACAT  247

seq1  ACATGCAGGCAAG-CCCTCATGTACATATTTTTAATTTTAAAGAATA-CC  288
      ||||||||||||| ||||||||||||||||||||||||||||||||| ||
seq2  ACATGCAGGCAAGCCCCTCATGTACATATTTTTAATTTTAAAGAATACCC  297

seq1  ACCCCCTTCCATCGTGGGCTCAGTTTTGATGAGGGCAAGAGCTAGATCTA  338
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCCTTCCATCGTGGGCTCAGTTTTGATGAGGGCAAGAGCTAGATCTA  347

seq1  TGCTCTGGCCGCATCCCCAGTCCAGCAGGGTCTTCCTACGTGGTTTAGTC  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTGGCCGCATCCCCAGTCCAGCAGGGTCTTCCTACGTGGTTTAGTC  397

seq1  CTGGTGAATTCTCCCTGCGGCCTTATTTTGCAGTCTTTTAATGCTGAGTG  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGAATTCTCCCTGCGGCCTTATTTTGCAGTCTTTTAATGCTGAGTG  447

seq1  TTCGGTAGGCAGATATTTAATCATAATGATGACCCCGAGGGACTGGTTTT  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGGTAGGCAGATATTTAATCATAATGATGACCCCGAGGGACTGGTTTT  497

seq1  ATTATCATCCCCATTTTGTGGCTGAAGAGACTAAAGGCACAGGGAGTCTG  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCATCCCCATTTTGTGGCTGAAGAGACTAAAGGCACAGGGAGTCTG  547

seq1  GATGGCTTTCCCAATGTTACTTGGCAAACTCTAGAGCAGAGGCCAAAATG  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCTTTCCCAATGTTACTTGGCAAACTCTAGAGCAGAGGCCAAAATG  597

seq1  CATGCAGGCAGCCTAACTCTAACGCATGCCCTTGACCTCTGTGTGGATTC  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCAGGCAGCCTAACTCTAACGCATGCCCTTGACCTCTGTGTGGATTC  647

seq1  AGGGTCAGGGAACGCATTTAGCTCTGGGTTGTCTGGTTGGTTGGCCTGTT  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTCAGGGAACGCATTTAGCTCTGGGTTGTCTGGTTGGTTGGCCTGTT  697

seq1  TTGTTGTTGGATTGTTTTATTTTGTTGAGGCCGACTCCTGCCCTGGCCTT  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGTTGGATTGTTTTATTTTGTTGAGGCCGACTCCTGCCCTGGCCTT  747

seq1  GAACTTGTGGCAATCCTCTTGCCTCAACTTCTCAAGCGCTGAGACTAACA  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTGTGGCAATCCTCTTGCCTCAACTTCTCAAGCGCTGAGACTAACA  797

seq1  GACCTGCCGCCATGCCTAGATATAACTCTGATGTAGTTATTTTGCAGTTT  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTGCCGCCATGCCTAGATATAACTCTGATGTAGTTATTTTGCAGTTT  847

seq1  AAGTGGCTGAAGTTAAATGACTGGATCCAAGCAGAGCCAAGATTTGAATC  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGCTGAAGTTAAATGACTGGATCCAAGCAGAGCCAAGATTTGAATC  897

seq1  CACTGTGATCAGATTGCGTGTCTCTGAAAGGGCACTTCACTTCTCTCAAG  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTGATCAGATTGCGTGTCTCTGAAAGGGCACTTCACTTCTCTCAAG  947

seq1  ATCTAGCCCAAGCTTTGGGGACAATCTTTCTCTCTCTGTCCTCAATGAAG  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAGCCCAAGCTTTGGGGACAATCTTTCTCTCTCTGTCCTCAATGAAG  997

seq1  GCTTGTTAGGTGCAAGGGTTGAACCAGGGTCTCATGTGGCACAGTCTGGC  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTTAGGTGCAAGGGTTGAACCAGGGTCTCATGTGGCACAGTCTGGC  1047

seq1  CGAAAACTTGCTGTGGAGCCAAAAATGACCTTGAATGTGTAATCTTCCTA  1088
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAAACTTGCTGTGGAGCCAAAAATGACCTTGAATGTGTAATCTTCCTA  1097

seq1  CCTCTGCCTCCTGAATTC  1106
      ||||||||||||||||||
seq2  CCTCTGCCTCCTGAATTC  1115