BAC Information

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BAC

Clone NameB6Ng01-101B15
Chromosome12 (Build37)
Map Location 39,774,886 - 39,880,513
singlet/doubletdoublet
Overlap genenone
Upstream geneDgkb, LOC668824, LOC100043142, Etv1, LOC100043145
Downstream geneLOC100043148, Arl4a, LOC100043606, Scin
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-101B15.bB6Ng01-101B15.g
ACCDH910398DH910399
length1,0551,009
definitionDH910398|Mus musculus domesticus DNA, BAC clone: B6Ng01-101B15, 5' end.DH910399|Mus musculus domesticus DNA, BAC clone: B6Ng01-101B15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(39,774,886 - 39,775,950)(39,879,498 - 39,880,513)
sequence
gaattcaaagcttaggttttagttcaggtttattcatcatgtttaacact
gcctaaacttcacaggcaaatcggaaatgaaacacaattgaaactaaacc
aagtcttttttgcctgtgaaggggccttaatatttcattttatgttttca
gatgggatctaatgaaaacgtgattttatacagattccttgtgtcaatta
ttcaccgtatttcttctaagccaatctgtgcgttcaacttgaagcttcat
taaggatcaagccaagtagtctttacaaagtaaagggtttcggtgatgga
cagatggcggctttcatgatgtcaggaagtgtcagatattatcgttggct
ctggaatggtggctactatccaaacagattgggaaacagacagaaagagc
aagaacaccatttgttttatttagatacattgtgaacagaaggaagcaag
acagagcatacttttacacatcttttttccagtccttgtgaaaacagttt
aggatttgttatgttatattagccctttcattatgcaaaggcatgtgaaa
gccagagaagccggggaaagaatttgtctcattgtgattttctatgaagt
ttgtttatttttattcttaaggaatatgcttcttttaaaactcctcttcc
attggaaggatgaatgcttaaggtagagagaaagaaggtgaggctcttct
gaagtgttgattgctgagagcatgaagagacttttgactacatgatccag
aatgtgggtgtctcagagaactttagcaaattctcagtcctcagtctgaa
ggtgtgtcttggtgaaaagccctgagatttgtttctgtgaggatttagcc
cccattggcagctagagggcagtatcagctccagacaagttggtggagtc
ccactacaggatcaaagattagtgataatccaccaggagttctaggatga
agcctagcagcacattgccaggggacttcgaacttaaaggctaaagcatt
taaagcacattcattgatgaaagtcttaaaattattttgtacttctttaa
tcaat
gaattcaaccccttctgtcactgtaggaagcaagcacttatttacatggt
ggtatttatttgtgcatgcaaatactcccagataaaataaaaataattaa
atcttttttaaaagttaacagctgtgcccaataattacattgacagtttg
tctcctgcaagcaaagtttgagcctctaaatgatagatatttctctttat
taatttaagaaaagaataatttgaaatatatttatgagtagatgttgaca
actggagaatttagaggtattatgtatgttagggttttaccagaaaattg
gagactgttttcttattgtatatgtgaaataaaagcaccaggaaattttg
gtgactgttgaacttggccagtcaggcagcaatgacaaggtcatagcaag
gcctatttcacactaaagctaaaatatacttcccaacatgtgacatgtgt
tattgatatggagctgaagggaaactcttgattccaaggagctctagtgg
accatcaagagcacctgtcccagaaaccaaggaaacaatcagttgctgaa
gttaggagagagaacttattcacagtatgaatgccaaaaagacaagagct
ttgataacttaaaatcttattttaaaataccctcagcaatttgtttcaat
tccaagtgaagggtttggaatttctatggtagtagtccaagccctcttgt
tctgaatgtttattaccgcagccattatcctaggatctgccttgcagagc
gatactagtgaaaggaagatcttgctgctgggtccgtttgagttactgtc
ttaatatatttatcagtcagttcagttgtcaaatgttctgcactttcaag
gtaactataggataaaaagaatgagcagactcattttaattacttttata
cttcaaagacttaaaaatcagtgatgagaccaaataaataatagtcatta
atctatcctttggaaaattttatatggtagtagatatatcatttgtatgg
aaataaatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_39774886_39775950
seq2: B6Ng01-101B15.b_46_1100

seq1  GAATTCAAAGCTTAGGTTTTAGTTCAGGTTTATTCATCATGTTTAACACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGCTTAGGTTTTAGTTCAGGTTTATTCATCATGTTTAACACT  50

seq1  GCCTAAACTTCACAGGCAAATCGGAAATGAAACACAATTGAAACTAAACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAAACTTCACAGGCAAATCGGAAATGAAACACAATTGAAACTAAACC  100

seq1  AAGTCTTTTTTGCCTGTGAAGGGGCCTTAATATTTCATTTTATGTTTTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTTTTTTGCCTGTGAAGGGGCCTTAATATTTCATTTTATGTTTTCA  150

seq1  GATGGGATCTAATGAAAACGTGATTTTATACAGATTCCTTGTGTCAATTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGGATCTAATGAAAACGTGATTTTATACAGATTCCTTGTGTCAATTA  200

seq1  TTCACCGTATTTCTTCTAAGCCAATCTGTGCGTTCAACTTGAAGCTTCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACCGTATTTCTTCTAAGCCAATCTGTGCGTTCAACTTGAAGCTTCAT  250

seq1  TAAGGATCAAGCCAAGTAGTCTTTACAAAGTAAAGGGTTTCGGTGATGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGATCAAGCCAAGTAGTCTTTACAAAGTAAAGGGTTTCGGTGATGGA  300

seq1  CAGATGGCGGCTTTCATGATGTCAGGAAGTGTCAGATATTATCGTTGGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGGCGGCTTTCATGATGTCAGGAAGTGTCAGATATTATCGTTGGCT  350

seq1  CTGGAATGGTGGCTACTATCCAAACAGATTGGGAAACAGACAGAAAGAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAATGGTGGCTACTATCCAAACAGATTGGGAAACAGACAGAAAGAGC  400

seq1  AAGAACACCATTTGTTTTATTTAGATACATTGTGAACAGAAGGAAGCAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACACCATTTGTTTTATTTAGATACATTGTGAACAGAAGGAAGCAAG  450

seq1  ACAGAGCATACTTTTACACATCTTTTTTCCAGTCCTTGTGAAAACAGTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGCATACTTTTACACATCTTTTTTCCAGTCCTTGTGAAAACAGTTT  500

seq1  AGGATTTGTTATGTTATATTAGCCCTTTCATTATGCAAAGGCATGTGAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTTGTTATGTTATATTAGCCCTTTCATTATGCAAAGGCATGTGAAA  550

seq1  GCCAGAGAAGCCGGGGAAAGAATTTGTCTCATTGTGATTTTCTATGAAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGAGAAGCCGGGGAAAGAATTTGTCTCATTGTGATTTTCTATGAAGT  600

seq1  TTGTTTATTTTTATTCTTAAGGAATATGCTTCTTTTAAAACTCCTCTTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTATTTTTATTCTTAAGGAATATGCTTCTTTTAAAACTCCTCTTCC  650

seq1  ATTGGAAGGATGAATGCTTAAGGTAGAGAGAAAGAAGGTGAGGCTCTTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGAAGGATGAATGCTTAAGGTAGAGAGAAAGAAGGTGAGGCTCTTCT  700

seq1  GAAGTGTTGATTGCTGAGAGCATGAAGAGACTTTTGACTACATGATCCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGTTGATTGCTGAGAGCATGAAGAGACTTTTGACTACATGATCCAG  750

seq1  AATGTGGGTGTCTCAGAGAACTTTAGCAAATTCTCAGTCCTCAGTCTGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGGGTGTCTCAGAGAACTTTAGCAAATTCTCAGTCCTCAGTCTGAA  800

seq1  GGTGTGTCTTGGTGAAAAGCCCTGAGATTTGTTTCTGTGAGGATTTAGCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGTCTTGGTGAAAAGCCCTGAGATTTGTTTCTGTGAGGATTTAGCC  850

seq1  CCCATTGGCAGCTAGAGGGCAGTATCAGCTCCAGACAAGTTGGTGGAGTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTGGCAGCTAGAGGGCAGTATCAGCTCCAGACAAGTTGGTGGAGTC  900

seq1  CCACTACAGGATCAAAGATTAGTGATAATCCACCAGGAGTTCTAGGATGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTACAGGATCAAAGATTAGTGATAATCCACCAGGAGTTCTAGGATGA  950

seq1  AGCCTAGCAGCACATTGCCAGGGGACTTCGAACTTAAAGGCTAAAGGCAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||| ||| 
seq2  AGCCTAGCAGCACATTGCCAGGGGACTTCGAACTTAAAGGCTAAA-GCA-  998

seq1  TTTAAAGCACATTCAATTGATGAAAGGTCTGTAAAATTTATTTTTGTAAC  1050
      |||||||||||||| |||||||||| |||| |||||||   |||||| ||
seq2  TTTAAAGCACATTC-ATTGATGAAA-GTCT-TAAAATT--ATTTTGT-AC  1042

seq1  TTCCTTATAATCAAT  1065
      |||  | ||||||||
seq2  TTC--TTTAATCAAT  1055

seq1: chr12_39879498_39880513
seq2: B6Ng01-101B15.g_69_1077 (reverse)

seq1  AATTTATTTCAATACAAATTGATATTATCTACTACCATATAAAATTTTTC  50
      |||||||||| ||||||| ||||| ||||||||||||||||||| |||||
seq2  AATTTATTTCCATACAAA-TGATA-TATCTACTACCATATAAAA-TTTTC  47

seq1  CAAAGGATAGATTAATGACTATTTATTTATTTGGTCTCATCACTGATTTT  100
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CAAAGGATAGATTAATGACTA-TTATTTATTTGGTCTCATCACTGATTTT  96

seq1  TAAGTCTTTTGAAGTATTAAAAGTAATTAAAATGAGTCCTGCTCATTCTT  150
      |||||| ||||||||| |||||||||||||||||||| ||||||||||||
seq2  TAAGTC-TTTGAAGTA-TAAAAGTAATTAAAATGAGT-CTGCTCATTCTT  143

seq1  TTTATCCTATAGTTACCTTGAAAGTGCAGAACATTTGACAACTGAACTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCCTATAGTTACCTTGAAAGTGCAGAACATTTGACAACTGAACTGA  193

seq1  CTGATAAATATATTAAGACAGTAACTCAAACGGACCCAGCAGCAAGATCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATAAATATATTAAGACAGTAACTCAAACGGACCCAGCAGCAAGATCT  243

seq1  TCCTTTCACTAGTATCGCTCTGCAAGGCAGATCCTAGGATAATGGCTGCG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTCACTAGTATCGCTCTGCAAGGCAGATCCTAGGATAATGGCTGCG  293

seq1  GTAATAAACATTCAGAACAAGAGGGCTTGGACTACTACCATAGAAATTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATAAACATTCAGAACAAGAGGGCTTGGACTACTACCATAGAAATTCC  343

seq1  AAACCCTTCACTTGGAATTGAAACAAATTGCTGAGGGTATTTTAAAATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCTTCACTTGGAATTGAAACAAATTGCTGAGGGTATTTTAAAATAA  393

seq1  GATTTTAAGTTATCAAAGCTCTTGTCTTTTTGGCATTCATACTGTGAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTAAGTTATCAAAGCTCTTGTCTTTTTGGCATTCATACTGTGAATA  443

seq1  AGTTCTCTCTCCTAACTTCAGCAACTGATTGTTTCCTTGGTTTCTGGGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTCTCTCCTAACTTCAGCAACTGATTGTTTCCTTGGTTTCTGGGAC  493

seq1  AGGTGCTCTTGATGGTCCACTAGAGCTCCTTGGAATCAAGAGTTTCCCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGCTCTTGATGGTCCACTAGAGCTCCTTGGAATCAAGAGTTTCCCTT  543

seq1  CAGCTCCATATCAATAACACATGTCACATGTTGGGAAGTATATTTTAGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCCATATCAATAACACATGTCACATGTTGGGAAGTATATTTTAGCT  593

seq1  TTAGTGTGAAATAGGCCTTGCTATGACCTTGTCATTGCTGCCTGACTGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGTGAAATAGGCCTTGCTATGACCTTGTCATTGCTGCCTGACTGGC  643

seq1  CAAGTTCAACAGTCACCAAAATTTCCTGGTGCTTTTATTTCACATATACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTCAACAGTCACCAAAATTTCCTGGTGCTTTTATTTCACATATACA  693

seq1  ATAAGAAAACAGTCTCCAATTTTCTGGTAAAACCCTAACATACATAATAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGAAAACAGTCTCCAATTTTCTGGTAAAACCCTAACATACATAATAC  743

seq1  CTCTAAATTCTCCAGTTGTCAACATCTACTCATAAATATATTTCAAATTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAAATTCTCCAGTTGTCAACATCTACTCATAAATATATTTCAAATTA  793

seq1  TTCTTTTCTTAAATTAATAAAGAGAAATATCTATCATTTAGAGGCTCAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTCTTAAATTAATAAAGAGAAATATCTATCATTTAGAGGCTCAAA  843

seq1  CTTTGCTTGCAGGAGACAAACTGTCAATGTAATTATTGGGCACAGCTGTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCTTGCAGGAGACAAACTGTCAATGTAATTATTGGGCACAGCTGTT  893

seq1  AACTTTTAAAAAAGATTTAATTATTTTTATTTTATCTGGGAGTATTTGCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTTAAAAAAGATTTAATTATTTTTATTTTATCTGGGAGTATTTGCA  943

seq1  TGCACAAATAAATACCACCATGTAAATAAGTGCTTGCTTCCTACAGTGAC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACAAATAAATACCACCATGTAAATAAGTGCTTGCTTCCTACAGTGAC  993

seq1  AGAAGGGGTTGAATTC  1016
      ||||||||||||||||
seq2  AGAAGGGGTTGAATTC  1009