BAC Information

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BAC

Clone NameB6Ng01-101C14
Chromosome12 (Build37)
Map Location 32,432,099 - 32,546,056
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100043055, Acp1, Sh3yl1, LOC629656, 9030611O19Rik, LOC668781, LOC100043065, LOC100043514, EG629667, LOC100043068, Lamb1-1, Dld, LOC668786, Slc26a3, Cbll1, Slc26a4, LOC100043531, Bcap29, Dus4l, LOC100043081, Gpr22
Downstream geneHbp1, Prkar2b, Pik3cg, 2010109K11Rik, LOC100043548, Pbef1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-101C14.bB6Ng01-101C14.g
ACCDH910438DH910439
length1,115995
definitionDH910438|Mus musculus domesticus DNA, BAC clone: B6Ng01-101C14, 5' end.DH910439|Mus musculus domesticus DNA, BAC clone: B6Ng01-101C14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,432,099 - 32,433,251)(32,545,057 - 32,546,056)
sequence
gaattcctactttcctgccatcttggacctgtggagacctgctgggaaca
ggacttctttaaaaaaaaaaaaaaaaaaaaaaaaagcaagtatgtttgga
aggctgtggtgcaaggcaattttttctggctacaagcaagatctctggaa
tcaaagagagcacacggctcttcctaaaattgaaggtgtatatgcccgag
atgaaacggagttctacttaggcaagagatgtgctcacgtgtataaagca
aaaaacaatacagcgactcctagaggcaaaccaaacaaaaacagagtgat
ctggggaaaagtaactcgggcccacggaagcagtgacatggttcgtgaca
cattctgaagcaaccttctgaagcaaccttcctgaaaaggccactggaca
cagaatccatgtgatgctgctgtaccatcctggatttaaaccaatggaaa
gtaaataaaagtggggaaaataagaattcccatcatcagattaaggcaca
tcttaatcgaacatgctcttattttaccttaattctatctgaaaggctgt
atttacaagtaagataacattatataagctgagttaagatttccacacat
cacttttggaatggggagcagatcacaatctgtaacagaaggaagttttc
tttccattgtatttagtgtgagccgtgagatgacgtatgagtacagtgta
gatacatttaactatgattagtgaaaggtgagagaagagtgtcattgtca
gctttgatgtgtagcctcaggtcactgctcttgaaaaccatagttgtgct
ttttgttcttcaggaaaacaaagatggcgaatgctgctgttgctgctttc
tgctagtgcagcaggaaggtccccagaatcccagggtccaggattaggag
gctgtgccttccatgggagacttgtcatctgccttagaactgtggtcatg
gtcagggtatgggggttcatgcagtaaagccaagacagagtgaccatcac
ctagctgacactgtcaaggcatgagatcagtcctgcggactctgctgttc
tcttgccattagatctgagatattgagttttctggatgcatcctgaggga
gtcagatcatgcaca
gaattccatatactgccagccttgattccacagttaatattcacaataat
ctattccttaatccattttatcttcgcttatggatggtgggttcaagaaa
gggtttctctgtataatagttctggttgttctgaactctccttgtagagc
aggctggccttaaactcacagagacccacctgcctcaccctcctgagtgt
tgggattagaggctgggtcaccatgtttggctcctcaacatatttcataa
tcttattttatttttaaattattttaaaattttttcattgcagttattca
ctgtacatgtcacataaggacattttatttttaatatatttttgattaat
tatttaagaatttcagggctagagagatgactcagaggttaagactactg
actgttcttccagaggtccttagttcaattcccagcaaccacatggtggc
tcacaaccatttgcaagggaatccaatgccctcttctggtgtgtctgaag
acagctacagtgtactcgtatacattaaataaatatatctttcagaaaag
aattagccaggtgtggtggcacacgcctttaatcccagcatttgggaggc
tgaggcaggatttctgagttcgaggccaacctggtctacagagtgagttc
caggacagccagggctacatagagaaaccctgtctgggaaaaaacaacat
aacaaaacaaaacaaaacaaaacaaacaaaaacagaaaagaatttcaaac
atttattttgatcctattcactatctgactctacctatcttatccccagt
ccaccctccaatatccatgcttcccaacgtcacagcctctttgaggactg
ctcatatattcactggtgtgccgtcctcttcacaaggccataccacatag
gaattatcacacaagtacaccctgcatactgagatgctcaccatatctcc
ctgccctcctgttttatatctgaatcatctcaaacaattgtggta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_32432099_32433251
seq2: B6Ng01-101C14.b_49_1163

seq1  GAATTCCTACTTTCCTGCCATCTTGGACCTGTGGAGACCTGCTGGGAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTACTTTCCTGCCATCTTGGACCTGTGGAGACCTGCTGGGAACA  50

seq1  GGACTTCTTTAAAAAAAAAAAAAAAAAAAAAAAAAGCAAGTATGTTTGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTTCTTTAAAAAAAAAAAAAAAAAAAAAAAAAGCAAGTATGTTTGGA  100

seq1  AGGCTGTGGTGCAAGGCAATTTTTTCTGGCTACAAGCAAGATCTCTGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGTGGTGCAAGGCAATTTTTTCTGGCTACAAGCAAGATCTCTGGAA  150

seq1  TCAAAGAGAGCACACGGCTCTTCCTAAAATTGAAGGTGTATATGCCCGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGAGAGCACACGGCTCTTCCTAAAATTGAAGGTGTATATGCCCGAG  200

seq1  ATGAAACGGAGTTCTACTTAGGCAAGAGATGTGCTCACGTGTATAAAGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAACGGAGTTCTACTTAGGCAAGAGATGTGCTCACGTGTATAAAGCA  250

seq1  AAAAACAATACAGCGACTCCTAGAGGCAAACCAAACAAAAACAGAGTGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAATACAGCGACTCCTAGAGGCAAACCAAACAAAAACAGAGTGAT  300

seq1  CTGGGGAAAAGTAACTCGGGCCCACGGAAGCAGTGACATGGTTCGTGACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGAAAAGTAACTCGGGCCCACGGAAGCAGTGACATGGTTCGTGACA  350

seq1  CATTCTGAAGCAACCTTCTGAAGCAACCTTCCTGAAAAGGCCACTGGACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTGAAGCAACCTTCTGAAGCAACCTTCCTGAAAAGGCCACTGGACA  400

seq1  CAGAATCCATGTGATGCTGCTGTACCATCCTGGATTTAAACCAATGGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATCCATGTGATGCTGCTGTACCATCCTGGATTTAAACCAATGGAAA  450

seq1  GTAAATAAAAGTGGGGAAAATAAGAATTCCCATCATCAGATTAAGGCACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATAAAAGTGGGGAAAATAAGAATTCCCATCATCAGATTAAGGCACA  500

seq1  TCTTAATCGAACATGCTCTTATTTTACCTTAATTCTATCTGAAAGGCTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAATCGAACATGCTCTTATTTTACCTTAATTCTATCTGAAAGGCTGT  550

seq1  ATTTACAAGTAAGATAACATTATATAAGCTGAGTTAAGATTTCCACACAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACAAGTAAGATAACATTATATAAGCTGAGTTAAGATTTCCACACAT  600

seq1  CACTTTTGGAATGGGGAGCAGATCACAATCTGTAACAGAAGGAAGTTTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTTGGAATGGGGAGCAGATCACAATCTGTAACAGAAGGAAGTTTTC  650

seq1  TTTCCATTGTATTTAGTGTGAGCCGTGAGATGACGTATGAGTACAGTGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCATTGTATTTAGTGTGAGCCGTGAGATGACGTATGAGTACAGTGTA  700

seq1  GATACATTTAACTATGATTAGTGAAAGGTGAGAGAAGAGTGTCATTGTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACATTTAACTATGATTAGTGAAAGGTGAGAGAAGAGTGTCATTGTCA  750

seq1  GCTTTGATGTGTAGCCTCAGGTCACTGCTCTTGAAAACCATAGTTGTGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGATGTGTAGCCTCAGGTCACTGCTCTTGAAAACCATAGTTGTGCT  800

seq1  TTTTGTTCTTCAGGAAAACAAAGATGGCGAATGCTGCTGTTGCTGC-TTC  849
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TTTTGTTCTTCAGGAAAACAAAGATGGCGAATGCTGCTGTTGCTGCTTTC  850

seq1  TGCTAGTGCAGCAGGAAGGTCCCCAGAATCCCAGGGGTCCAGGATTAGGA  899
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TGCTAGTGCAGCAGGAAGGTCCCCAGAATCCCA-GGGTCCAGGATTAGGA  899

seq1  GGCTGTGCCTTCCATGGGAGACTTGTCATCTGCCTTAGGAACTGTGGTCA  949
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GGCTGTGCCTTCCATGGGAGACTTGTCATCTGCCTTA-GAACTGTGGTCA  948

seq1  TGGTCAAGGGTATGGGGGTTCATGGAAGTAAAAGCCAAAGACAAGGAGTG  999
      ||||| ||||||||||||||||| | ||| |||||| ||||||  |||||
seq2  TGGTC-AGGGTATGGGGGTTCAT-GCAGT-AAAGCC-AAGACA--GAGTG  992

seq1  GACCCATCACCAAGCTGGACCACCTGGTCAAGGGCATGAAGATCAAGTCC  1049
         |||||||| |||||    ||   ||||| |||||| ||||| |||||
seq2  --ACCATCACCTAGCTG----ACACTGTCAA-GGCATG-AGATC-AGTCC  1033

seq1  CTGGCGGAACTCTTGCTGTTCTCCTTGCCCATTAAGGAATCTGAGATTAT  1099
         |||| |||| ||||||||| |||| ||||||    |||||||| |||
seq2  --TGCGG-ACTC-TGCTGTTCT-CTTG-CCATTA---GATCTGAGA-TAT  1073

seq1  TGAGGTTTTTCCTGAGTGCATCCCTGAAGGGGGAGGTTCTAAAGATCATG  1149
      ||||   ||| |||  ||||| |||||   |||||  ||   ||||||||
seq2  TGAG---TTTTCTGGATGCAT-CCTGA---GGGAG--TC---AGATCATG  1111

seq1  CACA  1153
      ||||
seq2  CACA  1115

seq1: chr12_32545057_32546056
seq2: B6Ng01-101C14.g_70_1064 (reverse)

seq1  TACCACAATTGATTTTGAGATGATTCAAGATATAAAACTAGGAGGGCAGG  50
      |||||||||||  ||||||||||||| ||||||||||| |||||||||||
seq2  TACCACAATTG--TTTGAGATGATTC-AGATATAAAAC-AGGAGGGCAGG  46

seq1  GAGATATGGTGAGCACACTCAGTATGCAGGGTGTACTTGTGTGAAAATGC  100
      |||||||||||||||  ||||||||||||||||||||||||||| ||| |
seq2  GAGATATGGTGAGCA-TCTCAGTATGCAGGGTGTACTTGTGTGATAATTC  95

seq1  CTATGTGGTATGGCCTTGTGGAAGAGGACGGCACACCAGTGAATATATGA  150
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CTATGTGGTATGGCCTTGT-GAAGAGGACGGCACACCAGTGAATATATGA  144

seq1  GCAGTCCTCAAAGAGGCTGTGACGTTGGGAAGCATGGATATTGGAGGGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTCCTCAAAGAGGCTGTGACGTTGGGAAGCATGGATATTGGAGGGTG  194

seq1  GACTGGGGATAAGATAGGTAGAGTCAGATAGTGAATAGGATCAAAATAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGGGGATAAGATAGGTAGAGTCAGATAGTGAATAGGATCAAAATAAA  244

seq1  TGTTTGAAATTCTTTTCTGTTTTTGTTTGTTTTGTTTTGTTTTGTTTTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGAAATTCTTTTCTGTTTTTGTTTGTTTTGTTTTGTTTTGTTTTGT  294

seq1  TTTGTTG-TTTTTCCCAGACAGGGTTTCTCTATGTAGCCCTGGCTGTCCT  349
      | ||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTGTTTTTTCCCAGACAGGGTTTCTCTATGTAGCCCTGGCTGTCCT  344

seq1  GGAACTCACTCTGTAGACCAGGTTGGCCTCGAACTCAGAAATCCTGCCTC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACTCACTCTGTAGACCAGGTTGGCCTCGAACTCAGAAATCCTGCCTC  394

seq1  AGCCTCCCAAATGCTGGGATTAAAGGCGTGTGCCACCACACCTGGCTAAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTCCCAAATGCTGGGATTAAAGGCGTGTGCCACCACACCTGGCTAAT  444

seq1  TCTTTTCTGAAAGATATATTTATTTAATGTATACGAGTACACTGTAGCTG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTCTGAAAGATATATTTATTTAATGTATACGAGTACACTGTAGCTG  494

seq1  TCTTCAGACACACCAGAAGAGGGCATTGGATTCCCTTGCAAATGGTTGTG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAGACACACCAGAAGAGGGCATTGGATTCCCTTGCAAATGGTTGTG  544

seq1  AGCCACCATGTGGTTGCTGGGAATTGAACTAAGGACCTCTGGAAGAACAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCACCATGTGGTTGCTGGGAATTGAACTAAGGACCTCTGGAAGAACAG  594

seq1  TCAGTAGTCTTAACCTCTGAGTCATCTCTCTAGCCCTGAAATTCTTAAAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTAGTCTTAACCTCTGAGTCATCTCTCTAGCCCTGAAATTCTTAAAT  644

seq1  AATTAATCAAAAATATATTAAAAATAAAATGTCCTTATGTGACATGTACA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAATCAAAAATATATTAAAAATAAAATGTCCTTATGTGACATGTACA  694

seq1  GTGAATAACTGCAATGAAAAAATTTTAAAATAATTTAAAAATAAAATAAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATAACTGCAATGAAAAAATTTTAAAATAATTTAAAAATAAAATAAG  744

seq1  ATTATGAAATATGTTGAGGAGCCAAACATGGTGACCCAGCCTCTAATCCC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGAAATATGTTGAGGAGCCAAACATGGTGACCCAGCCTCTAATCCC  794

seq1  AACACTCAGGAGGGTGAGGCAGGTGGGTCTCTGTGAGTTTAAGGCCAGCC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTCAGGAGGGTGAGGCAGGTGGGTCTCTGTGAGTTTAAGGCCAGCC  844

seq1  TGCTCTACAAGGAGAGTTCAGAACAACCAGAACTATTATACAGAGAAACC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTACAAGGAGAGTTCAGAACAACCAGAACTATTATACAGAGAAACC  894

seq1  CTTTCTTGAACCCACCATCCATAAGCGAAGATAAAATGGATTAAGGAATA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTGAACCCACCATCCATAAGCGAAGATAAAATGGATTAAGGAATA  944

seq1  GATTATTGTGAATATTAACTGTGGAATCAAGGCTGGCAGTATATGGAATT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATTGTGAATATTAACTGTGGAATCAAGGCTGGCAGTATATGGAATT  994

seq1  C  1000
      |
seq2  C  995