BAC Information

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BAC

Clone NameB6Ng01-101E05
Chromosome12 (Build37)
Map Location 7,736,394 - 7,892,223
singlet/doubletdoublet
Overlap geneEG668388
Upstream geneLOC668380
Downstream geneApob, 1110057K04Rik, Gdf7, Hs1bp3, BC106175, Rhob, Slc7a15, LOC100043154, Pum2, F730043H23, Sdc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-101E05.bB6Ng01-101E05.g
ACCDH910505DH910506
length1,1111,149
definitionDH910505|Mus musculus domesticus DNA, BAC clone: B6Ng01-101E05, 5' end.DH910506|Mus musculus domesticus DNA, BAC clone: B6Ng01-101E05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,891,101 - 7,892,223)(7,736,394 - 7,737,580)
sequence
gaattcatctgcaaaccacttcttcacagccctgtgtaatatatctctta
gactgtctcctatggatccttgctggcccctggaaaccattagctattgc
ccatgaatcctcatgtattcaacttaaacaactttttcttcagataaggt
atatgcaacagtatgtctgttcactccctgctgggttggagtgtaattct
tcagcaacctattttggggtgttactggctttaggtgagagccagggata
agtcaggcttaaattatttttcttcagtggcatggaacaagtctgtaaga
gcacttggattgtctgaaggaataaaaatgatctagtgtttcaagaacct
gtttatatagtattcttgggcttggattagctagcactatgctcaatatt
tacatttgtcaaaggagttctgctgggtctttttaaaaatattaagtaaa
ggtggcatgctgctcaaagaatggggtatccatcgattggacctaccagt
tgaagaccaagccatgatattcatattataatagtatttgacacacccac
cactttggagtgcacttcaaattcaaactacaacactgagagcgtgttga
actttctgcacattaactttatgatttttagaatcctttaaatctggagg
tcaaaacagaagcaaagttatctctcacgggcaaaggcttttctatttgt
ggctgggcctgccagggttaggtattctcaggctttcagtgccttttcag
gatcatcctaccttagtggcatgtagacctcagctttatttccccaaatc
aatgaataaccttgggactgcatactggtagagtctaagtgtcacaagtt
aacacaagagaaagagtgcacactttgtctcctctctgacttccatttgc
ccttgttttcttctcttgtccttttgaattgttggttatagaagccctta
ggaaggttgccttttcccaggatatgaggcactagtgaatctggtttatt
ttccttaatatacatctacatcctagagacctttgtaagtctcctgaaaa
gtaaggatacctctgtgcttccagtaatgatcacacttctgctctggctt
tagtgaaattt

gaattcaggttagatttttcaactccatagctcattctgcattgaaagtc
tcaatttctgagtttataaatatattggaaaaatgtatgttctcactaaa
atgtggtacaaatttatgtcctcattaaatgtgattgctgaaataatgat
atataacccaaactcattgagctatttaagagaaaacttaggctccagca
aaaccccatagcaaagcattagaacccccctttttttctttttagcaaac
caattacagtgttgaagtgggtgaaacatcccaaggaatcatcaagaaga
tcatatagtaattgggccaatttatagtaggtaactgagaagtgcctaaa
aattgtcatttctcctggttagggctgcctaggaaaaaatgtgattaata
aatagcttaagcagcaaacagaaggtacttacaatgcacgaatgctccgg
ggagatgaggtattgagaaaatcattacgataaagtacaggcagacgttt
tgcttaaaggagctgaaacaacttttcaaaacatcacattaagggaatat
ttgggatggaattgcttattaagattttctttaagtggccattcaattat
aaggtcaaattctaggtgcattaagatgaaattcaatcaaggaaagtttt
gtggatttttttccagggtgtataaaaatccaagggcctagagccaggct
gtttttgagctcccctcccatactctgtccagaggacagtactcagaatc
ttctgcattcccataattcaaaggggcgttatttggtgagtggtaaacag
aggcagacaatgcgattatcctatgatcaattagtgttagaagccatggc
atttactggcctattttacacaagatgttcaggaaacacaccacagaact
ttagatgccatccttcagaacttagtcaagccttcaaagggatagacatc
tggcactgacataagctcttccaagactttgcttatcttgagtgtagatg
ttgcctgctgcgtcatcctgctactctttacttcctcgtttcacggagat
agcattcattttgcctactcagtatctttcctcatttctagagcagcatc
atccgttgggggacctgctcctcccacctcgattcaagatgtcagaaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_7891101_7892223
seq2: B6Ng01-101E05.b_44_1154 (reverse)

seq1  AAATTTCACTAAAATGACAAGACAAGAATGTGTAGATCATTACTTGAAGA  50
      |||||||||||||    | |||  |||| |||| |||||||||| |||| 
seq2  AAATTTCACTAAA---GCCAGAGCAGAA-GTGT-GATCATTACTGGAAG-  44

seq1  CACAGAGGTAATCCTTACTTCTCAGAGAACTTAACAAAGGTCTACTAGAT  100
      ||||||||| |||||||||| ||||   |||| |||||||||| ||||  
seq2  CACAGAGGT-ATCCTTACTTTTCAGGAGACTT-ACAAAGGTCT-CTAGGA  91

seq1  AGTAGATGTAATATAAAGGAAAAATAAACCAGATTCACTAGTGACCTCAT  150
       |||||||| |||| |||| ||||||||||||||||||||||| ||||||
seq2  TGTAGATGT-ATATTAAGG-AAAATAAACCAGATTCACTAGTG-CCTCAT  138

seq1  ATCCTGGGGAAAAGCAACCTTCCTAAAGGGCTTCTAATAACCAACAATTC  200
      |||||||| ||| ||||||||||| |||||||||| ||||||||||||||
seq2  ATCCTGGGAAAAGGCAACCTTCCT-AAGGGCTTCT-ATAACCAACAATTC  186

seq1  AAAAGGACAAGAGAAGAAAACAAGGGCAAATGGAAGTCAGAGAGGAGACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGACAAGAGAAGAAAACAAGGGCAAATGGAAGTCAGAGAGGAGACA  236

seq1  AAGTGTGCACTCTTTCTCTTGTGTTAACTTGTGACACTTAGACTCTACCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTGCACTCTTTCTCTTGTGTTAACTTGTGACACTTAGACTCTACCA  286

seq1  GTATGCAGTCCCAAGGTTATTCATTGATTTGGGGAAAT-AAGCTGAGGTC  349
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GTATGCAGTCCCAAGGTTATTCATTGATTTGGGGAAATAAAGCTGAGGTC  336

seq1  TACATGCCACTAAGGTAGGATGATCCTGAAAAGGCACTG-AAGCCTGAGA  398
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TACATGCCACTAAGGTAGGATGATCCTGAAAAGGCACTGAAAGCCTGAGA  386

seq1  ATACCTAACCCTGGCAGGCCCAGCCACAAATAGAAAAGCCTTTGCCCGTG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCTAACCCTGGCAGGCCCAGCCACAAATAGAAAAGCCTTTGCCCGTG  436

seq1  AGAGATAACTTTGCTTCTGTTTTGACCTCCAGATTTAAAGGATTCTAAAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATAACTTTGCTTCTGTTTTGACCTCCAGATTTAAAGGATTCTAAAA  486

seq1  ATCATAAAGTTAATGTGCAGAAAGTTCAACACGCTCTCAGTGTTGTAGTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATAAAGTTAATGTGCAGAAAGTTCAACACGCTCTCAGTGTTGTAGTT  536

seq1  TGAATTTGAAGTGCACTCCAAAGTGGTGGGTGTGTCAAATACTATTATAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTTGAAGTGCACTCCAAAGTGGTGGGTGTGTCAAATACTATTATAA  586

seq1  TATGAATATCATGGCTTGGTCTTCAACTGGTAGGTCCAATCGATGGATAC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAATATCATGGCTTGGTCTTCAACTGGTAGGTCCAATCGATGGATAC  636

seq1  CCCATTCTTTGAGCAGCATGCCACCTTTACTTAATATTTTTAAAAAGACC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTCTTTGAGCAGCATGCCACCTTTACTTAATATTTTTAAAAAGACC  686

seq1  CAGCAGAACTCCTTTGACAAATGTAAATATTGAGCATAGTGCTAGCTAAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGAACTCCTTTGACAAATGTAAATATTGAGCATAGTGCTAGCTAAT  736

seq1  CCAAGCCCAAGAATACTATATAAACAGGTTCTTGAAACACTAGATCATTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGCCCAAGAATACTATATAAACAGGTTCTTGAAACACTAGATCATTT  786

seq1  TTATTCCTTCAGACAATCCAAGTGCTCTTACAGACTTGTTCCATGCCACT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCCTTCAGACAATCCAAGTGCTCTTACAGACTTGTTCCATGCCACT  836

seq1  GAAGAAAAATAATTTAAGCCTGACTTATCCCTGGCTCTCACCTAAAGCCA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAAAATAATTTAAGCCTGACTTATCCCTGGCTCTCACCTAAAGCCA  886

seq1  GTAACACCCCAAAATAGGTTGCTGAAGAATTACACTCCAACCCAGCAGGG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACACCCCAAAATAGGTTGCTGAAGAATTACACTCCAACCCAGCAGGG  936

seq1  AGTGAACAGACATACTGTTGCATATACCTTATCTGAAGAAAAAGTTGTTT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAACAGACATACTGTTGCATATACCTTATCTGAAGAAAAAGTTGTTT  986

seq1  AAGTTGAATACATGAGGATTCATGGGCAATAGCTAATGGTTTCCAGGGGC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGAATACATGAGGATTCATGGGCAATAGCTAATGGTTTCCAGGGGC  1036

seq1  CAGCAAGGATCCATAGGAGACAGTCTAAGAGATATATTACACAGGGCTGT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAAGGATCCATAGGAGACAGTCTAAGAGATATATTACACAGGGCTGT  1086

seq1  GAAGAAGTGGTTTGCAGATGAATTC  1123
      |||||||||||||||||||||||||
seq2  GAAGAAGTGGTTTGCAGATGAATTC  1111


seq1: chr12_7736394_7737580
seq2: B6Ng01-101E05.g_69_1217

seq1  GAATTCAGGTTAGATTTTTCAACTCCATAGCTCATTCTGCATTGAAAGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGTTAGATTTTTCAACTCCATAGCTCATTCTGCATTGAAAGTC  50

seq1  TCAATTTCTGAGTTTATAAATATATTGGAAAAATGTATGTTCTCACTAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTTCTGAGTTTATAAATATATTGGAAAAATGTATGTTCTCACTAAA  100

seq1  ATGTGGTACAAATTTATGTCCTCATTAAATGTGATTGCTGAAATAATGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGTACAAATTTATGTCCTCATTAAATGTGATTGCTGAAATAATGAT  150

seq1  ATATAACCCAAACTCATTGAGCTATTTAAGAGAAAACTTAGGCTCCAGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAACCCAAACTCATTGAGCTATTTAAGAGAAAACTTAGGCTCCAGCA  200

seq1  AAACCCCATAGCAAAGCATTAGAACCCCCCTTTTTTTCTTTTTAGCAAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCCATAGCAAAGCATTAGAACCCCCCTTTTTTTCTTTTTAGCAAAC  250

seq1  CAATTACAGTGTTGAAGTGGGTGAAACATCCCAAGGAATCATCAAGAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTACAGTGTTGAAGTGGGTGAAACATCCCAAGGAATCATCAAGAAGA  300

seq1  TCATATAGTAATTGGGCCAATTTATAGTAGGTAACTGAGAAGTGCCTAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATAGTAATTGGGCCAATTTATAGTAGGTAACTGAGAAGTGCCTAAA  350

seq1  AATTGTCATTTCTCCTGGTTAGGGCTGCCTAGGAAAAAATGTGATTAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTCATTTCTCCTGGTTAGGGCTGCCTAGGAAAAAATGTGATTAATA  400

seq1  AATAGCTTAAGCAGCAAACAGAAGGTACTTACAATGCACGAATGCTCCGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGCTTAAGCAGCAAACAGAAGGTACTTACAATGCACGAATGCTCCGG  450

seq1  GGAGATGAGGTATTGAGAAAATCATTACGATAAAGTACAGGCAGACGTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGATGAGGTATTGAGAAAATCATTACGATAAAGTACAGGCAGACGTTT  500

seq1  TGCTTAAAGGAGCTGAAACAACTTTTCAAAACATCACATTAAGGGAATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTAAAGGAGCTGAAACAACTTTTCAAAACATCACATTAAGGGAATAT  550

seq1  TTGGGATGGAATTGCTTATTAAGATTTTCTTTAAGTGGCCATTCAATTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGATGGAATTGCTTATTAAGATTTTCTTTAAGTGGCCATTCAATTAT  600

seq1  AAGGTCAAATTCTAGGTGCATTAAGATGAAATTCAATCAAGGAAAGTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCAAATTCTAGGTGCATTAAGATGAAATTCAATCAAGGAAAGTTTT  650

seq1  GTGGATTTTTTTCCAGGGTGTATAAAAATCCAAGGGCCTAGAGCCAGGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGATTTTTTTCCAGGGTGTATAAAAATCCAAGGGCCTAGAGCCAGGCT  700

seq1  GTTTTTGAGCTCCCCTCCCATACTCTGTCCAGAGGACAGTACTCAGAATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTGAGCTCCCCTCCCATACTCTGTCCAGAGGACAGTACTCAGAATC  750

seq1  TTCTGCATTCCCATAATTCAAAGGGGCGTTATTTGGTGAGTGGTAAACAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCATTCCCATAATTCAAAGGGGCGTTATTTGGTGAGTGGTAAACAG  800

seq1  AGGCAGACAATGCGATTATCCTATGATCAATTAGTGTTAGAAGCCATGGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGACAATGCGATTATCCTATGATCAATTAGTGTTAGAAGCCATGGC  850

seq1  ACTTACTGGCCTATTTTACACAAGATGTTCAGGAAACACACCACAAGAAC  900
      | |||||||||||||||||||||||||||||||||||||||||| |||||
seq2  ATTTACTGGCCTATTTTACACAAGATGTTCAGGAAACACACCAC-AGAAC  899

seq1  TTTAAGATGCCATCCTTCAGGAACTTAGTCAAAGCCTTCAAAGGGATAGA  950
      ||| ||||||||||||||| |||||||||| |||||||||||||||||||
seq2  TTT-AGATGCCATCCTTCA-GAACTTAGTC-AAGCCTTCAAAGGGATAGA  946

seq1  CATCTGGCACTGACATAAGGCTCTTCCAAAGACTTTTGCTTATCTTGGAA  1000
      |||||||||||||||||| |||||||| ||||| |||||||||||||  |
seq2  CATCTGGCACTGACATAA-GCTCTTCC-AAGAC-TTTGCTTATCTTG--A  991

seq1  GTGTAAAGATGTGTGCCTTGGCTGCAGTCATTCTTGCTACTTCTTTTACT  1050
      ||||  |||||| |||||  ||||| |||| || |||||||   ||||||
seq2  GTGT--AGATGT-TGCCT--GCTGC-GTCA-TCCTGCTACT--CTTTACT  1032

seq1  TCCTCGGTTTCCACGGGAGATAGCCATTCATTTTGCCTACTCAGTATCCT  1100
      ||||||  || ||| |||||||| ||||||||||||||||||||||||  
seq2  TCCTCG--TTTCAC-GGAGATAG-CATTCATTTTGCCTACTCAGTATC--  1076

seq1  TTCCCTCATTTTCTAGACGCAGCAATCATCGTTTTGGGGAAACCTGCTGC  1150
      || ||||| |||||||| ||||| ||||||  || ||||  |||||||  
seq2  TTTCCTCA-TTTCTAGA-GCAGC-ATCATCCGTTGGGGG--ACCTGCT--  1119

seq1  ACTCCCACTCCAGATTTTTCAAGAGTGCTCCAGAACA  1187
       ||||||| |  ||   ||||||| ||   |||||||
seq2  CCTCCCAC-CTCGA---TTCAAGA-TG--TCAGAACA  1149


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