BAC Information

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BAC

Clone NameB6Ng01-101F14
Chromosome12 (Build37)
Map Location 37,872,096 - 37,873,193
singlet/doubletsinglet
Overlap geneMeox2
Upstream geneBzw2, Ankmy2, 1700108M19Rik, Sostdc1, 4930579E17Rik, LOC638858
Downstream geneA530016O06Rik, LOC100043139, Dgkb
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-101F14.bB6Ng01-101F14.g
ACCDH910561DH910562
length1,2411,085
definitionDH910561|Mus musculus domesticus DNA, BAC clone: B6Ng01-101F14, 5' end.DH910562|Mus musculus domesticus DNA, BAC clone: B6Ng01-101F14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacatgataaaagcaatctacagcaaacta
gtagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctaccttttcaacatag
tacttgaagtattagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaggaggaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattccaccagagaactcctaaacc
tgataaacagcttcggtgaagtagctggatataaaattaactcaagcaac
tcaatggcctttctctacacaaagaataaacaggctgagaaagaaattag
ggaaacaaaacccttctcaatagtcacaaataatataaaatatctcggcg
tgactctaactaaggaagtgaaagatctgtacgataaaaacttcaagtct
ctgaagaaagaaattaaagaagatctcagaagatggaaagatctcccatg
ctcatggattggcaggatcaacattgtaaaaatggctatcttgccaaaag
caatctacagattcaatgcaatccccatcaaaattccaactcaattcttc
aacgaattagaaggagcaatttgcaaattcatctggaataacaaaaaacc
taggatagcaaaaactcttctcaaggataaaagaacctctggtggaatca
ccatgcctgacctaaagctttactacagagcaattgtggtaaaaactgca
tggtattggtatagagacagacaagtagaccaatggaatagaattgaaga
cccagaaatgaacccacacacctatggtcacttgatcttcgacaagggag
ctaaaccatccagtggaagaaagacagcattttcacatttggtgctggca
caactggttgttatcatgtagaagatacgataaatccatactatctcttt
ggactatgtcaatctaaatggatcaagacttccataaaccagagaaactg
aaacttaatgaggaaaagtgggaaagcttgaggttggcacatgtaaattc
tgacagaaagcatggcttgggctgtagatcgaaattgcaatgggactatg
gaaccaggtcgcagccagaatcggtctagacagacccaacattggaggac
tttcctatccaatcgatggcactattcactatataagagct
gaattccttatgctgaacaaatggcaggtttcactagtcagaggatgaat
actttacctgcacataaccaaacgtgatacttatcaaactatatttaagt
gatttcaatattgcattgaaatcattggcatgttggtattaaagcttggt
aatataactgatagccagaaaatacaatttgttttatgtgtctggaatta
aaaaaaaaatagagtgtacttgacttaacaaatatgggaccaatgttttt
aatataaaataaaactgtaatttaaggtttaagttatatgcacacacata
tactcatatataccccacaaaaaatagactgaacaattttaatttcattt
actatgaaaacaaaaacttgcttcttagattcagaattaggcaatttgag
ctttgacttttggctctgttctttagtagtaacctgtaaaaactatgcaa
tatctaagaaaatatgactggcaaaagacactaattgcttcaaaaaaaat
ttaattgtttttgattggtaaagaattgtttaagtagtccccttttaaaa
atacacagtagtagaaagagctagaaaataaaatcagccgggcagtggtg
gtgcacacctttaatcccagcacttgggaggcagaggcaggcagatttct
gattttgaggccagcttggtttacagagtaagttccaggacagccagggc
tatacagagaaaccctgtctcaaaacaaaacaaaacaaaacaaacaaaca
aaacaaacaaaacaaacaagcaagcaaagcaagcaagcaaatctaataaa
atttacggtaaaagaagctttatttttctccttcaatccttcgtaggata
attgaacctttgatctcttccctattctatcacacttgcttctgaggtaa
actatggtaaaaaagtagtgttcattatgggttcaattagatttcatatt
taggattttttttaagcaaatgctttgtagtttttgactactgtatatac
ttagaggaaatagttgttgtggcttttagataacatttgcttaaactggg
tggaggtggagtagtttgtattccagccactcagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_37872096_37873193
seq2: B6Ng01-101F14.g_69_1153

seq1  GAATTCCTTATGCTGAACAAATGGCAGGTTTCACTAGTCAGAGGATGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTATGCTGAACAAATGGCAGGTTTCACTAGTCAGAGGATGAAT  50

seq1  ACTTTACCTGCACATAACCAAACGTGATACTTATCAAACTATATTTAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTACCTGCACATAACCAAACGTGATACTTATCAAACTATATTTAAGT  100

seq1  GATTTCAATATTGCATTGAAATCATTGGCATGTTGGTATTAAAGCTTGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCAATATTGCATTGAAATCATTGGCATGTTGGTATTAAAGCTTGGT  150

seq1  AATATAACTGATAGCCAGAAAATACAATTTGTTTTATGTGTCTGGAATTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAACTGATAGCCAGAAAATACAATTTGTTTTATGTGTCTGGAATTA  200

seq1  AAAAAAAAATAGAGTGTACTTGACTTAACAAATATGGGACCAATGTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAATAGAGTGTACTTGACTTAACAAATATGGGACCAATGTTTTT  250

seq1  AATATAAAATAAAACTGTAATTTAAGGTTTAAGTTATATGCACACACATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAAAATAAAACTGTAATTTAAGGTTTAAGTTATATGCACACACATA  300

seq1  TACTCATATATACCCCACAAAAAATAGACTGAACAATTTTAATTTCATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCATATATACCCCACAAAAAATAGACTGAACAATTTTAATTTCATTT  350

seq1  ACTATGAAAACAAAAACTTGCTTCTTAGATTCAGAATTAGGCAATTTGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATGAAAACAAAAACTTGCTTCTTAGATTCAGAATTAGGCAATTTGAG  400

seq1  CTTTGACTTTTGGCTCTGTTCTTTAGTAGTAACCTGTAAAAACTATGCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGACTTTTGGCTCTGTTCTTTAGTAGTAACCTGTAAAAACTATGCAA  450

seq1  TATCTAAGAAAATATGACTGGCAAAAGACACTAATTGCTTCAAAAAAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTAAGAAAATATGACTGGCAAAAGACACTAATTGCTTCAAAAAAAAT  500

seq1  TTAATTGTTTTTGATTGGTAAAGAATTGTTTAAGTAGTCCCCTTTTAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTGTTTTTGATTGGTAAAGAATTGTTTAAGTAGTCCCCTTTTAAAA  550

seq1  ATACACAGTAGTAGAAAGAGCTAGAAAATAAAATCAGCCGGGCAGTGGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACAGTAGTAGAAAGAGCTAGAAAATAAAATCAGCCGGGCAGTGGTG  600

seq1  GTGCACACCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGCAGATTTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCACACCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGCAGATTTCT  650

seq1  GATTTTGAGGCCAGCTTGGTTTACAGAGTAAGTTCCAGGACAGCCAGGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTGAGGCCAGCTTGGTTTACAGAGTAAGTTCCAGGACAGCCAGGGC  700

seq1  TATACAGAGAAACCCTGTCTCAAAACAAAACAAAACAAAACAAAACAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||   |||
seq2  TATACAGAGAAACCCTGTCTCAAAACAAAACAAAACAAAACAAA--CAAA  748

seq1  CAAAACAAAACAAAACAAAGCAAAGCAAAGCAAAGCA---AAGCAAATCT  797
      |||||| ||||||||||||   |||| ||||||||||   ||||||||||
seq2  CAAAAC-AAACAAAACAAA--CAAGC-AAGCAAAGCAAGCAAGCAAATCT  794

seq1  AATAAAATTTACGGTAAAAAGAAAGCTTTATTTTTCTCCTTCAATCCTTC  847
      |||||||||||||||||||   ||||||||||||||||||||||||||||
seq2  AATAAAATTTACGGTAAAA--GAAGCTTTATTTTTCTCCTTCAATCCTTC  842

seq1  GTAGGATAATTGAACCTTTGATCTCTTCCCTATTCTATCACACTTGCTTC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGATAATTGAACCTTTGATCTCTTCCCTATTCTATCACACTTGCTTC  892

seq1  TGAGGTAAACTATGGTAAAAAAGTAGTGTTCAATAATGGTTCAATTAGAT  947
      |||||||||||||||||||||||||||||||| ||  |||||||||||| 
seq2  TGAGGTAAACTATGGTAAAAAAGTAGTGTTCATTATGGGTTCAATTAGA-  941

seq1  TTTCATATTTAGGATTTTTTTTAAGCAAATGCTTTTGTAGTTTTTTGAAC  997
      |||||||||||||||||||||||||||||||| ||||||||||||   ||
seq2  TTTCATATTTAGGATTTTTTTTAAGCAAATGC-TTTGTAGTTTTT--GAC  988

seq1  TACTGGTATATACTTAGGAAGGAGATAG-TGTTGTTGGCTGTAAGGATAA  1046
      |||| ||||||||||||  |||| |||| ||||| ||||| | | |||||
seq2  TACT-GTATATACTTAG--AGGAAATAGTTGTTG-TGGCTTTTA-GATAA  1033

seq1  CATTTGCTTAAACTGGGT-GAGGTGGAGTAAGTTTGTAATTCCAG-CACT  1094
      |||||||||||||||||| |||||||||| ||||||| ||||||| ||||
seq2  CATTTGCTTAAACTGGGTGGAGGTGGAGT-AGTTTGT-ATTCCAGCCACT  1081

seq1  CAGT  1098
      ||||
seq2  CAGT  1085