BAC Information

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BAC

Clone NameB6Ng01-102G19
Chromosome12 (Build37)
Map Location 63,012,286 - 63,013,422
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040300, LOC665677, Nanog-ps2, Lrfn5, LOC665699, LOC665707
Downstream geneLOC100040403, LOC665713, LOC622746, LOC100040438, 1700047L15Rik, Tspyl-ps, EG665741
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-102G19.bB6Ng01-102G19.g
ACCDH911323DH911324
length1,2011,123
definitionDH911323|Mus musculus domesticus DNA, BAC clone: B6Ng01-102G19, 5' end.DH911324|Mus musculus domesticus DNA, BAC clone: B6Ng01-102G19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctaaacctgaggaataccaattggctgagaaacacctaaagaaat
gttcaacatccttagtcatcagggaaatgcaaatcaaaacaacccctcat
accagtttctacctcataccagtcagaatggctaagataaaaaacagcag
atgatggcaaggatgtggagaaagaggaacactcctccacttctggtggg
gttgcaagctgttacaactactctggaaatcagttggcagttccaaaaaa
attggacatactactaccagagaacacagctttaccactcctgggcatat
acccagaatatatttcaacatgtaatgaggacacatgctccactatgttc
atagctgccttatttatgaaagccagaagctggaaagaacccagatgacc
ctcaacagaggaatggatacagaaaatgtcatacatttacaaaatggaat
actactcatctattaaaaacaaggaattcatgacattcatgggcaaatgg
atgggactagaaaatattatccttagtgaggtaacccaatctcaaatgaa
cacacatggtatacactcactgataagtgaatattaactcataaactcag
aaaatcaaagatacaattcagagaccaaatgaagctcaaaagaaggaaga
ccgaaatatggatactctggtccttcttagaaggtggatcaaaataccca
tgggaggagaaaaagtgtggaacagacactgaaggaaaatgtacccagag
aaggccctacctggggaaccatcccatatacagtcaccgaacccattcac
tgttgtggataccaacaagtgcttgctgacaggagcctgatatagctgtc
tcctgagaggttctgccagtgcctgacaaatacagaggtagatattctca
gccaaccattggactgagtacaagtccccaatggaggagctagagaaagg
actaaaggagctcaaagagcttgcagtctcataggagaacaaaaatatga
acctaccagtacccctagagatcccagggactaaagcacgtccataaaag
tcaacttggaggatccgtgtttcagctgcattcttagcagaggtggccct
tgtgggaaatcaattgggaggaagaaattcttggtggctgagaaagcctc
gatgctccattgttaggaaggctggaatacagggttgggtggggttggtt
a
gaattccatacagtgcagttttacagtagagaatgagagagtggtctggg
ccacatgtcagcagatgcttgaggagtcttggcagaactccaagagttat
ttgaaatctgtttgatattcagtgatatctgaacagcctccagcaggcaa
tggtttgtggatcactacagtggtaaagaggagttagagctagagactgg
taacatataaaaggttgatcgccttacaaactgtcagaaggttttactac
tacactataagtgaaagatatcaagggtctaagcctagatttgtctagaa
agatgaaaaaaaggaaattgagatttaagtggtcttatatgatcaggatg
aagttattgaagtaacaaacataatcataaagtaagatgtcatatgtact
aaatggtgagacatttgtataaattaacagaatcctaacaaacagaccaa
ataatatttttggtgtaagagaaaatacaattctagcatatgaatttgaa
gatccttggaattctggattaatcatgagctgtgtattggattcagagta
tttctataagtagtatttcttactttggtttttgaatataaaaagaggtc
tagaagagaataagaaaagaaagatctccagataatataaacttttacag
tagttcaaagttgactatgctgtggtttagtaataacttgatgaacaaga
cagggagcaggaggaatttttaaaccactcccagagaccatgccaactta
atgaaatgtaatctttaaatataatcctagactgaagcactatggccaga
tgagaaacattgtttttatacagattctagtttaccctagaattcacata
agcaagttattgttagatttagtcatatggtttctatgttttattttaag
gttgatattgggggaattttgtggaaatcattcgaacacctttttcaaat
ctagtttagaaatttaagataagaaaaataaaatgtacctttgcttttct
taaaagatttatgagcagagtgagttgctctggatcccctgactcatgta
tttatgaattaaaatccaaatattaggatcctctacatttccttgcttga
catacctttccttaattaatact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_63012286_63013422
seq2: B6Ng01-102G19.g_67_1189 (reverse)

seq1  AGTATTATATTAAAGAAAAGTATGTCAAAGGCCAGGAAATGTAGAGGATC  50
      ||||||| ||||| |||| |||||||||  || |||||||||||||||||
seq2  AGTATTA-ATTAAGGAAAGGTATGTCAA--GCAAGGAAATGTAGAGGATC  47

seq1  TTAATAATTTGGGATTTTAATTCATAAAATGACAATGAAGGTCAGGGGAC  100
       |||||  || |||||||||||||||||   || ||||  ||||||||| 
seq2  CTAATA--TTTGGATTTTAATTCATAAA--TAC-ATGA--GTCAGGGGAT  90

seq1  CCAGAGCAACTCAACTCTGCCTCATAAATCTTTTAAGAAAAGCAAAGGTA  150
      |||||||||||| |||||| ||||||||||||||||||||||||||||||
seq2  CCAGAGCAACTC-ACTCTG-CTCATAAATCTTTTAAGAAAAGCAAAGGTA  138

seq1  CCTTTTTATTTTCTTATTCTTAAATTTCTAAAACTAGATTTGAAAAAGGT  200
      | ||||  |||||||| |||||||||||| ||||||||||||||||||||
seq2  CATTTTATTTTTCTTA-TCTTAAATTTCT-AAACTAGATTTGAAAAAGGT  186

seq1  GTTCGAATGATTTCCACAAAATTCCCCCAATATCAACCTTAAAATAAAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCGAATGATTTCCACAAAATTCCCCCAATATCAACCTTAAAATAAAAC  236

seq1  ATAGAAACCATATGACTAAATCTAACAATAACTTGCTTATGTGAATTCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAACCATATGACTAAATCTAACAATAACTTGCTTATGTGAATTCTA  286

seq1  GGGTAAACTAGAATCTGTATAAAAACAATGTTTCTCATCTGGCCATAGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAAACTAGAATCTGTATAAAAACAATGTTTCTCATCTGGCCATAGTG  336

seq1  CTTCAGTCTAGGATTATATTTAAAGATTACATTTCATTAAGTTGGCATGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGTCTAGGATTATATTTAAAGATTACATTTCATTAAGTTGGCATGG  386

seq1  TCTCTGGGAGTGGTTTAAAAATTCCTCCTGCTCCCTGTCTTGTTCATCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGGGAGTGGTTTAAAAATTCCTCCTGCTCCCTGTCTTGTTCATCAA  436

seq1  GTTATTACTAAACCACAGCATAGTCAACTTTGAACTACTGTAAAAGTTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTACTAAACCACAGCATAGTCAACTTTGAACTACTGTAAAAGTTTA  486

seq1  TATTATCTGGAGATCTTTCTTTTCTTATTCTCTTCTAGACCTCTTTTTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATCTGGAGATCTTTCTTTTCTTATTCTCTTCTAGACCTCTTTTTAT  536

seq1  ATTCAAAAACCAAAGTAAGAAATACTACTTATAGAAATACTCTGAATCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAAAACCAAAGTAAGAAATACTACTTATAGAAATACTCTGAATCCA  586

seq1  ATACACAGCTCATGATTAATCCAGAATTCCAAGGATCTTCAAATTCATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACAGCTCATGATTAATCCAGAATTCCAAGGATCTTCAAATTCATAT  636

seq1  GCTAGAATTGTATTTTCTCTTACACCAAAAATATTATTTGGTCTGTTTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGAATTGTATTTTCTCTTACACCAAAAATATTATTTGGTCTGTTTGT  686

seq1  TAGGATTCTGTTAATTTATACAAATGTCTCACCATTTAGTACATATGACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGATTCTGTTAATTTATACAAATGTCTCACCATTTAGTACATATGACA  736

seq1  TCTTACTTTATGATTATGTTTGTTACTTCAATAACTTCATCCTGATCATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTACTTTATGATTATGTTTGTTACTTCAATAACTTCATCCTGATCATA  786

seq1  TAAGACCACTTAAATCTCAATTTCCTTTTTTTCATCTTTCTAGACAAATC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACCACTTAAATCTCAATTTCCTTTTTTTCATCTTTCTAGACAAATC  836

seq1  TAGGCTTAGACCCTTGATATCTTTCACTTATAGTGTAGTAGTAAAACCTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCTTAGACCCTTGATATCTTTCACTTATAGTGTAGTAGTAAAACCTT  886

seq1  CTGACAGTTTGTAAGGCGATCAACCTTTTATATGTTACCAGTCTCTAGCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACAGTTTGTAAGGCGATCAACCTTTTATATGTTACCAGTCTCTAGCT  936

seq1  CTAACTCCTCTTTACCACTGTAGTGATCCACAAACCATTGCCTGCTGGAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACTCCTCTTTACCACTGTAGTGATCCACAAACCATTGCCTGCTGGAG  986

seq1  GCTGTTCAGATATCACTGAATATCAAACAGATTTCAAATAACTCTTGGAG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTCAGATATCACTGAATATCAAACAGATTTCAAATAACTCTTGGAG  1036

seq1  TTCTGCCAAGACTCCTCAAGCATCTGCTGACATGTGGCCCAGACCACTCT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCCAAGACTCCTCAAGCATCTGCTGACATGTGGCCCAGACCACTCT  1086

seq1  CTCATTCTCTACTGTAAAACTGCACTGTATGGAATTC  1137
      |||||||||||||||||||||||||||||||||||||
seq2  CTCATTCTCTACTGTAAAACTGCACTGTATGGAATTC  1123