BAC Information

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BAC

Clone NameB6Ng01-103H03
Chromosome12 (Build37)
Map Location 68,627,394 - 68,628,043
singlet/doubletsinglet
Overlap genenone
Upstream geneMdga2, LOC100040745
Downstream geneLOC100040681
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-103H03.b
ACCDH912034
length1,078
definitionDH912034|Mus musculus domesticus DNA, BAC clone: B6Ng01-103H03, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccttcccctagggaaatccacttcagcaactggcattgatttcac
agagtccaaggtcatggaagcatggcacctgggctgtggactgggggttg
cggggggaggagggagacacccatcactcaagagtatgactctgtacttg
tattttctccacggagctaaccacacccacccacctgactgtaaccctga
gggtatggtaacctccatgacactgggtgggacaatctgggacctgagga
ttggggtctattcctgagtgattttaaggagcatccttgtggctccggat
cttctccacctctactggccctcccaaatttccttccactactaatcatc
cctcgtcacccaaatttcctattaacctcgataacgcaagtctgtgcatt
gcttgtgatccacatatcctcaacacctccattatagactctaatcctcc
cgccatgtaccattttttatggggtgggggtagggtagtctcacacccaa
tactctagtctattttgaataacctgctgtgcttcaagcaacttctaagt
ttcatctagtacctgacctacctatatacctgatctgtaggtccttctga
tactgcatacattttatttaaccagtcagactctgtgcatttttctccag
ggtttttttccatgagtcatgagtctgacttattcttccttctgtgcatt
tctccaaagccccagctctacccgatactttatgcttcaataggggacac
acattctgtacatcagcccagtatcctctgtctgtctgacttctttcaag
ttagcaatatccgaatcctaggtccaaatacacctacttatcctcttctc
tatcccacctgtctgtaacagaggcagagtcaaaagagaaatacacacac
ccagatttcttcataaaacaacaacatgaaagtttaggcattttcctata
aaactagcagtcttataaaatgttgccaatgacagctcctggaatatcca
tgaccactgagataaaagaccaaccatcggtttaagataattcaaaattt
aaccaacccctgaaaaataaccgaatga
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_68627394_68628043
seq2: B6Ng01-103H03.b_483_1118

seq1  AATCCTCCCTCCATGTACCATTTTTAACTTCACAGATGTAGCCCAGGTCT  50
      ||||||||| ||||||||||||||| |       |  ||||   | ||||
seq2  AATCCTCCCGCCATGTACCATTTTTTATGGGGTGGGGGTAGGGTA-GTCT  49

seq1  CACACCCAATACTCTAGTCTATTTTGAATAACCTGCTGTGCTTCAAGCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACCCAATACTCTAGTCTATTTTGAATAACCTGCTGTGCTTCAAGCAA  99

seq1  CTTCTAAGTTTCATCTAGTACCTGACCTACCTATATACCTGATCTGTAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTAAGTTTCATCTAGTACCTGACCTACCTATATACCTGATCTGTAGG  149

seq1  TCCTTCTGATACTGCATACATTTTATTTAACCAGTCAGACTCTGTGCATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCTGATACTGCATACATTTTATTTAACCAGTCAGACTCTGTGCATT  199

seq1  TTTCTCCAGGGTTTTATTCCATGAGTCATGAGTCTGACTTATTCTTCCTT  250
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TTTCTCCAGGGTTTTTTTCCATGAGTCATGAGTCTGACTTATTCTTCCTT  249

seq1  CTGTGCATTTCTCCAAAG-CCCAGCTCTACCCGATACTTTATGCTTCAAT  299
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CTGTGCATTTCTCCAAAGCCCCAGCTCTACCCGATACTTTATGCTTCAAT  299

seq1  A-GGGACACACATTCTGTACATCAGCCCAGTATCCTCTGTCTGTCTGACT  348
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGACACACATTCTGTACATCAGCCCAGTATCCTCTGTCTGTCTGACT  349

seq1  TCATTCAACGTCAGCAATATCCGAATCCTAGGTCCAAATACACCTACGTA  398
      || ||||| || ||||||||||||||||||||||||||||||||||| ||
seq2  TCTTTCAA-GTTAGCAATATCCGAATCCTAGGTCCAAATACACCTACTTA  398

seq1  TCCTCTCCTCTATCCCAACCTGTCTGTAACAGAGGCAGAGCCAAAAGAGA  448
      |||||| ||||||||| ||||||||||||||||||||||| |||||||||
seq2  TCCTCTTCTCTATCCC-ACCTGTCTGTAACAGAGGCAGAGTCAAAAGAGA  447

seq1  AATACACACACCCAGATTTCATCATAAAACAACAAACAATGAAAGTTTAA  498
      |||||||||||||||||||| ||||||||||||||   |||||||||| |
seq2  AATACACACACCCAGATTTCTTCATAAAACAACAA--CATGAAAGTTT-A  494

seq1  GGCATTTCACTATAAAAACTAGCAGTCTTATAAAAATGTTTGCCAATGAC  548
      |||||||  |||| ||||||||||||||||| |||||| |||||||||||
seq2  GGCATTTTCCTAT-AAAACTAGCAGTCTTAT-AAAATG-TTGCCAATGAC  541

seq1  AGCTACATGGATATATCCATGAACACAGAATATAAAAGACTAATCATCAG  598
      |||| | |||| |||||||||| ||| | | ||||||||| || |||| |
seq2  AGCT-CCTGGA-ATATCCATGACCACTG-AGATAAAAGACCAACCATC-G  587

seq1  GTTTAAAGATAATTCAAAAATTTAAACAAAACACAAGAAAATAACTGAAT  648
      |||| ||||||||||||||  || ||| || | |   |||||||| ||||
seq2  GTTT-AAGATAATTCAAAA--TTTAACCAACCCCTGAAAAATAACCGAAT  634

seq1  GA  650
      ||
seq2  GA  636