BAC Information

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BAC

Clone NameB6Ng01-103H15
Chromosome12 (Build37)
Map Location 59,006,710 - 59,007,842
singlet/doubletsinglet
Overlap genenone
Upstream geneSlc25a21, AU021838, LOC100040044, Foxa1, 4921506M07Rik, EG217600, BC042761
Downstream geneSstr1, Clec14a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-103H15.bB6Ng01-103H15.g
ACCDH912055DH912056
length1,0481,126
definitionDH912055|Mus musculus domesticus DNA, BAC clone: B6Ng01-103H15, 5' end.DH912056|Mus musculus domesticus DNA, BAC clone: B6Ng01-103H15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacttaaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcaggtaaatgcaaatcaaaacaacactgagat
tctacttcactccagtcagaatggcaaagatcaaaaactcaggtgacagc
agatgctggtgaggatgtggagaaaggggaacactcctccattgttggtg
ggattgcaagcttttacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgtcccaacaggtaagaagaacacatgctccactat
gctcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gaatactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atgggtggacctggagggtatcatcccgagtgaagtaacccaatcacaaa
ggaactcgcacaatatgtactcactgataagtggatattagcccagaaac
ttaggatacccaagatataagatacaacttgccaaacgcatgaaattcaa
gaagaatgaagaccaaagtgtggacactttaccctttcttagaaatggga
acaaaacacccatggaaggagttacagagacaaaatttggagctgtgacg
aaaggatggtccatctagtgattgccatatgcagggatccatcccataat
cagcttccaaatgctgacactattgcatacactagcaagattttgctgaa
aggacccagatatctctctctctcgtgagactatgccggggcctagcaaa
cacagaagtggatgatcacagtcagctattggatgggtcacacagccctc
aatggaggagctagagaattacccaaggagttaaagggactgtaccctat
agtgggacactatatagctaccagatcctcggagtctcttgtcttggc
gaattccagaaggtgacattgtatgcctctagagtgacaatacatgccac
tgaatgtattgatcttttattcccaaacttttctaaacttactattttag
tttgtttagtttagtgtagtttagtttagtttgtgttttctttgggcttc
attagatttttgtacatataagattatatcttagaacaatacttgaacat
cttagaaagaagcctgtttacttactcttttcaaatctacatacttttat
tccttcactattgaatatgatatagctagagacttttgggggaaggggag
aagagtctcactaggtagcccaagctggtctgattttattatccaacttt
aaaagttgtccttagaataattttaatacctgagttgtaaaagaagttat
aaaatgtccgttttaaataataatcattattctataactttaatttcaaa
tggagtattaggaaaagttatatttcttattattgtgttatatcaaagac
taattttaaaatccattaacccaagtactacataaaagctgtcttcaagg
acaccagaagtgtctgaatgtgtttaccactttttaggatttacccacat
acatggacttcctgtttaaatctaccatctaccaactgtaattatagtaa
aagatttttacagtaatctattattggctcatttggtcagccaagatggc
aaagggcaaggtcatttgatttatgtttgttgggcaacagaaccatgaga
aaagaggacatacagaaattactagaaactctggaacgaggtgactttaa
tctcaaatccactatgcgtatatgatgcttctagtcaatctatttaaatc
tctgtatttagtcccagcaagtataaagattatatctaactcgtaaggca
gttgtacaattttcataacaacattttgaaagcacttcagaatcaacata
ccagtttctgctattattattgttcttatatggtagaaggggttatggat
gttatttcactgatgttcaggatttctagtattgtattagagaaaatcta
actctcagcatctacattcagatgctatcgcttctagtagcctcagctga
tgattgggcctgagggaaaatataac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_59006710_59007842
seq2: B6Ng01-103H15.g_69_1194 (reverse)

seq1  GTTATATTTTCCTTCAGGCCAAATCATCAGCCTTGAGGCTACTAGAAAGC  50
      |||||||||||| ||||||| ||||||||||  |||||||||||| ||||
seq2  GTTATATTTTCCCTCAGGCCCAATCATCAGC--TGAGGCTACTAG-AAGC  47

seq1  GATAGCATCTGAAATGTAGATGCTGAGAGTTAAGAATTTCTCTAATACAA  100
      ||||||||||| ||||||||||||||||||| ||| ||||||||||||||
seq2  GATAGCATCTG-AATGTAGATGCTGAGAGTT-AGATTTTCTCTAATACAA  95

seq1  TACTTAGAAATTCTG-ACATCAGTGAAATAACATTCATTAACCCCTTTCT  149
      ||| ||||||| ||| |||||||||||||||||| || ||||||| ||||
seq2  TAC-TAGAAATCCTGAACATCAGTGAAATAACATCCA-TAACCCC-TTCT  142

seq1  ACCATAATAAGAACAATAGTAATAGCAGAAACTGGTATGTTGATTCTG-A  198
      ||||| |||||||||||| ||||||||||||||||||||||||||||| |
seq2  ACCAT-ATAAGAACAATAATAATAGCAGAAACTGGTATGTTGATTCTGAA  191

seq1  GTGCTTTCAATATGTTGTTATGAAAATTGTACAACTGCCTTACGAGTTAG  248
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTTCAAAATGTTGTTATGAAAATTGTACAACTGCCTTACGAGTTAG  241

seq1  ATATAATCTTTATACTTGCTGGGACTAAATACAGAGATTTAAATAGATTG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAATCTTTATACTTGCTGGGACTAAATACAGAGATTTAAATAGATTG  291

seq1  ACTAGAAGCATCATATACGCATAGTGGATTTGAGATTAAAGTCACCTCGT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGAAGCATCATATACGCATAGTGGATTTGAGATTAAAGTCACCTCGT  341

seq1  TCCAGAGTTTCTAGTAATTTCTGTATGTCCTCTTTTCTCATGGTTCTGTT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAGTTTCTAGTAATTTCTGTATGTCCTCTTTTCTCATGGTTCTGTT  391

seq1  GCCCAACAAACATAAATCAAATGACCTTGCCCTTTGCCATCTTGGCTGAC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAACAAACATAAATCAAATGACCTTGCCCTTTGCCATCTTGGCTGAC  441

seq1  CAAATGAGCCAATAATAGATTACTGTAAAAATCTTTTACTATAATTACAG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGAGCCAATAATAGATTACTGTAAAAATCTTTTACTATAATTACAG  491

seq1  TTGGTAGATGGTAGATTTAAACAGGAAGTCCATGTATGTGGGTAAATCCT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTAGATGGTAGATTTAAACAGGAAGTCCATGTATGTGGGTAAATCCT  541

seq1  AAAAAGTGGTAAACACATTCAGACACTTCTGGTGTCCTTGAAGACAGCTT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGTGGTAAACACATTCAGACACTTCTGGTGTCCTTGAAGACAGCTT  591

seq1  TTATGTAGTACTTGGGTTAATGGATTTTAAAATTAGTCTTTGATATAACA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTAGTACTTGGGTTAATGGATTTTAAAATTAGTCTTTGATATAACA  641

seq1  CAATAATAAGAAATATAACTTTTCCTAATACTCCATTTGAAATTAAAGTT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAATAAGAAATATAACTTTTCCTAATACTCCATTTGAAATTAAAGTT  691

seq1  ATAGAATAATGATTATTATTTAAAACGGACATTTTATAACTTCTTTTACA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAATAATGATTATTATTTAAAACGGACATTTTATAACTTCTTTTACA  741

seq1  ACTCAGGTATTAAAATTATTCTAAGGACAACTTTTAAAGTTGGATAATAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGGTATTAAAATTATTCTAAGGACAACTTTTAAAGTTGGATAATAA  791

seq1  AATCAGACCAGCTTGGGCTACCTAGTGAGACTCTTCTCCCCTTCCCCCAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGACCAGCTTGGGCTACCTAGTGAGACTCTTCTCCCCTTCCCCCAA  841

seq1  AAGTCTCTAGCTATATCATATTCAATAGTGAAGGAATAAAAGTATGTAGA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTCTAGCTATATCATATTCAATAGTGAAGGAATAAAAGTATGTAGA  891

seq1  TTTGAAAAGAGTAAGTAAACAGGCTTCTTTCTAAGATGTTCAAGTATTGT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAAAGAGTAAGTAAACAGGCTTCTTTCTAAGATGTTCAAGTATTGT  941

seq1  TCTAAGATATAATCTTATATGTACAAAAATCTAATGAAGCCCAAAGAAAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGATATAATCTTATATGTACAAAAATCTAATGAAGCCCAAAGAAAA  991

seq1  CACAAACTAAACTAAACTACACTAAACTAAACAAACTAAAATAGTAAGTT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAACTAAACTAAACTACACTAAACTAAACAAACTAAAATAGTAAGTT  1041

seq1  TAGAAAAGTTTGGGAATAAAAGATCAATACATTCAGTGGCATGTATTGTC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAAGTTTGGGAATAAAAGATCAATACATTCAGTGGCATGTATTGTC  1091

seq1  ACTCTAGAGGCATACAATGTCACCTTCTGGAATTC  1133
      |||||||||||||||||||||||||||||||||||
seq2  ACTCTAGAGGCATACAATGTCACCTTCTGGAATTC  1126