BAC Information

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BAC

Clone NameB6Ng01-105B14
Chromosome12 (Build37)
Map Location 49,575,853 - 49,576,969
singlet/doubletsinglet
Overlap genenone
Upstream geneEG664891
Downstream geneGm1818, GA_x5J8B7W54VK-284379-285078, Olfr1399-ps1, EG665036, LOC100039366, Foxg1, ENSMUSG00000045946, LOC100039424
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-105B14.bB6Ng01-105B14.g
ACCDH913210DH913211
length8691,099
definitionDH913210|Mus musculus domesticus DNA, BAC clone: B6Ng01-105B14, 5' end.DH913211|Mus musculus domesticus DNA, BAC clone: B6Ng01-105B14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatgtctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatccgtctggcggttcctca
gaaaattggacatagtactactggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactccgctattaaaaagaatcagcatccaaacgctgacaccat
tgcatacactagcaagattttatcgaaaggacccagatgtagctgtctct
tgtgagactatgccggggcctagcaaacacagaagtggatgcccacagtc
agctaatggatggatcacagggctcccaatggaggagctagagaaagtac
ccaaggagctaaagggatctgcaaccctatagttggatcaacattatgaa
ccaaccagtaccccggagctcttgactctagctgcatatgtatcaaaaga
tggcctagtcggccatcactggaaagagaggcccattggacacacaaact
ttatatgccccagaacaggggaacgccagggccaaaaaggggagtgggcg
ggtaggggattgggggtgg

gaattcagcatttgaaagcaagtattattttgaagaatgggagaaatact
tgactatctgagttagaagggttgccaaaatgttttggaaacctagttga
tgctggagcacaaatttatagtgacatctggatttaactgcacaggtgca
aaggaagacagataattagattcgacctgatctaggattttgccaaacat
gtgctgaaaggacacagcgacaaaacactatacacatttagcagatcttg
gtgaaaataaagcacttattatccttctgaaatgactgggagataggtgg
cagtataatgatgcatgcttttttgttaaaatttactaattctgtatgct
tgattaataaatgtgtagcttatatgagaagcaagtcagggaatcacatt
ttagtacttaggggatttgaagtagctaaaagcagttgtaaatttatata
aattctttttataatatagatcagaattgttggtttccacatgatgttac
tcactcttacctggaaaggggatttccttggggcatatgtggtgcataaa
cacagtgccttcccacactgagttacatagctgcattcagtcttggaagt
catctttgtgaatagctcattatccatttgaaacttcttctgaataattt
cttatgcaacatgcaccgctcttgcctttatcccaagcaagccaatattc
atcatccagaaaaccatgtggcttttccaaactgggtcataatctaagct
tttcaaggacctgctactacatactaagtttattgaaaaaactttatttc
caccttgctgggtagaaaatatcatttaatggttattacctcaaagctca
aaaactgaatttctccaaaggcatcaggaatccaattcactcatagcact
ctctaattgcttgtgtttctctttgtcactaggaaatatattttactttt
atgattagatagactctgagactgctctaacattcccacatttctatttt
ctctacatcattcttatggataaacttaggttatagttctattactccat
aaatattgatttccttgtaatctttaatgagtatatttggaagaactat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_49575853_49576969
seq2: B6Ng01-105B14.g_69_1167 (reverse)

seq1  ATAGTTTCTTTCAAATATTACTCATTATAAAGGAATTAACAAGGAAATCA  50
      |||| ||||| |||||| |||||||  |||||  ||| ||||||||||||
seq2  ATAG-TTCTTCCAAATA-TACTCAT--TAAAG--ATT-ACAAGGAAATCA  43

seq1  TATATTTATTGGAGTAATAGAACTTATAAACTAAGTTTATTCCATAAGAA  100
       ||||||| |||||||||||||| ||||| ||||||||| ||||||||||
seq2  -ATATTTA-TGGAGTAATAGAAC-TATAACCTAAGTTTA-TCCATAAGAA  89

seq1  TTGATGTAGAGAAAATTAGAAATGTGGGAATTGTTAGAGCAGTCTCAGAG  150
       |||||||||||||| |||||||||||||| |||||||||||||||||||
seq2  -TGATGTAGAGAAAA-TAGAAATGTGGGAA-TGTTAGAGCAGTCTCAGAG  136

seq1  TTCTATTCTAATCATAAAAGTAAAATATATTTCCTAAGTGACAAAGAGAA  200
       |||| ||||||||||||||||||||||||||||| ||||||||||||||
seq2  -TCTA-TCTAATCATAAAAGTAAAATATATTTCCT-AGTGACAAAGAGAA  183

seq1  ACACAAGCAATTAGAGAGTGCTATTGAGTGAATTGGATTCCTGATGCCTT  250
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  ACACAAGCAATTAGAGAGTGCTA-TGAGTGAATTGGATTCCTGATGCCTT  232

seq1  TGGAGAAATTCAGTTTTTGAGCTTTGAGGTAATAACCATTAAATGATATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAAATTCAGTTTTTGAGCTTTGAGGTAATAACCATTAAATGATATT  282

seq1  TTCTACCCAGCAAGGTGGAAATAAAGTTTTTTCAATAAACTTAGTATGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACCCAGCAAGGTGGAAATAAAGTTTTTTCAATAAACTTAGTATGTA  332

seq1  GTAGCAGGTCCTTGAAAAGCTTAGATTATGACCCAGTTTGGAAAAGCCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCAGGTCCTTGAAAAGCTTAGATTATGACCCAGTTTGGAAAAGCCAC  382

seq1  ATGGTTTTCTGGATGATGAATATTGGCTTGCTTGGGATAAAGGCAAGAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTTTCTGGATGATGAATATTGGCTTGCTTGGGATAAAGGCAAGAGC  432

seq1  GGTGCATGTTGCATAAGAAATTATTCAGAAGAAGTTTCAAATGGATAATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCATGTTGCATAAGAAATTATTCAGAAGAAGTTTCAAATGGATAATG  482

seq1  AGCTATTCACAAAGATGACTTCCAAGACTGAATGCAGCTATGTAACTCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTATTCACAAAGATGACTTCCAAGACTGAATGCAGCTATGTAACTCAG  532

seq1  TGTGGGAAGGCACTGTGTTTATGCACCACATATGCCCCAAGGAAATCCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGAAGGCACTGTGTTTATGCACCACATATGCCCCAAGGAAATCCCC  582

seq1  TTTCCAGGTAAGAGTGAGTAACATCATGTGGAAACCAACAATTCTGATCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAGGTAAGAGTGAGTAACATCATGTGGAAACCAACAATTCTGATCT  632

seq1  ATATTATAAAAAGAATTTATATAAATTTACAACTGCTTTTAGCTACTTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTATAAAAAGAATTTATATAAATTTACAACTGCTTTTAGCTACTTCA  682

seq1  AATCCCCTAAGTACTAAAATGTGATTCCCTGACTTGCTTCTCATATAAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCCCTAAGTACTAAAATGTGATTCCCTGACTTGCTTCTCATATAAGC  732

seq1  TACACATTTATTAATCAAGCATACAGAATTAGTAAATTTTAACAAAAAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACATTTATTAATCAAGCATACAGAATTAGTAAATTTTAACAAAAAAG  782

seq1  CATGCATCATTATACTGCCACCTATCTCCCAGTCATTTCAGAAGGATAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCATCATTATACTGCCACCTATCTCCCAGTCATTTCAGAAGGATAAT  832

seq1  AAGTGCTTTATTTTCACCAAGATCTGCTAAATGTGTATAGTGTTTTGTCG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGCTTTATTTTCACCAAGATCTGCTAAATGTGTATAGTGTTTTGTCG  882

seq1  CTGTGTCCTTTCAGCACATGTTTGGCAAAATCCTAGATCAGGTCGAATCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTCCTTTCAGCACATGTTTGGCAAAATCCTAGATCAGGTCGAATCT  932

seq1  AATTATCTGTCTTCCTTTGCACCTGTGCAGTTAAATCCAGATGTCACTAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATCTGTCTTCCTTTGCACCTGTGCAGTTAAATCCAGATGTCACTAT  982

seq1  AAATTTGTGCTCCAGCATCAACTAGGTTTCCAAAACATTTTGGCAACCCT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTGTGCTCCAGCATCAACTAGGTTTCCAAAACATTTTGGCAACCCT  1032

seq1  TCTAACTCAGATAGTCAAGTATTTCTCCCATTCTTCAAAATAATACTTGC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAACTCAGATAGTCAAGTATTTCTCCCATTCTTCAAAATAATACTTGC  1082

seq1  TTTCAAATGCTGAATTC  1117
      |||||||||||||||||
seq2  TTTCAAATGCTGAATTC  1099


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