BAC Information

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BAC

Clone NameB6Ng01-105D03
Chromosome12 (Build37)
Map Location 8,660,039 - 8,775,968
singlet/doubletdoublet
Overlap genePum2
Upstream geneEG668388, Apob, 1110057K04Rik, Gdf7, Hs1bp3, BC106175, Rhob, Slc7a15, LOC100043154
Downstream geneF730043H23, Sdc1, Laptm4a, Matn3, Wdr35, Ttc32, LOC633030, LOC100042238, Osr1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-105D03.bB6Ng01-105D03.g
ACCDH913282DH913283
length8131,069
definitionDH913282|Mus musculus domesticus DNA, BAC clone: B6Ng01-105D03, 5' end.DH913283|Mus musculus domesticus DNA, BAC clone: B6Ng01-105D03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(8,775,386 - 8,775,968)(8,660,039 - 8,661,111)
sequence
gaattccatgcagtatttctgaaatgaagctagttaactcctaatatgga
aagctttttcaaaacctactttgagtagattgttgggctgcacactttta
atcccagctctcgagaggcagagagacaggcaaatctctaaatttgaggc
caacctggtctacagagctagttcctggacagctagagctacacaggaaa
ccctgtcttcaaaaacctaaaaaacggggctggagagatggctcagcagt
taagagcactgactgctcttccaaaggtctggagttcaattcccagcaac
cacatggtggctcacaaccatccataacgagatctggcgccctcttctgg
agtgtctgaagacagctacagtgtacttacatataataaataagaaaatc
ttaaaaaaacaaaaaacaaaacaaaacaaaaaaaaaaactaaaaaacgag
ggctagagagatggctcagtggttaagaataatgactgctcttccagagg
acccaggttcaagtcccagcacccacaacaatggtagctcacaacagtct
gtaacttcagtttctgacacttttacacatacatgcaggcaaaacaccaa
tggacataagataaaaataaatttaaggggctggtgagatggctcagtgg
gtaagagcacccgactgctcttccgaaggtccagagttcgaatcccagca
accacatggtggctcacaaccatccgtaacaagatctgactccctcttct
ggtgtgtctgaagacagctacagtgtacttacatataataataaaataaa
taaaaaaaaaata
gaattctttaaagtgagcgtgtgcacagagatagcaagtatttgggccgg
ctcaatggatggaggtgtttggctgatgacctggaattggcgtgatagca
ggacagctaacgtctgcagattggtccaagaagaaatgctttccctggaa
gtattcatttcactggaatgttcatacctgtaatcccaacacttggtagg
ctgaaacaagattgatacacgttcaagaccaacctgggctacatattgag
ttctaggctagttggtgctatccagatagactctatctcaaaacaaacaa
taatcagaaataccgctcattccaagccaggcttcatgagcccaggaacc
agatcaggcaaagcagaactcagagagaatgctacagtgaataaggatga
ggtcggtggagacaagacaggatcaagtctagagtgtgaagaagtttgac
ttaatgtgagaatgtccccccatccaatatagagtccataatgcaaaaat
gtccagacacacatgacacatggttaaagatcacttgaaatatggtttgt
acaactgagaaactgtgcttttttcaagtgttcttttttttcagtgtata
ttaattatacacgagaatgggttcattactacatcttcctacagtttata
attatgtgtttcattcatatttgtctttgttaccatctcttgtcccttcc
ccactcacgctgaacgaccccctcttcccagctagacccctagtttagtg
cctttaaaaaaaacattatttattttatgtgtatgagtgcactctcactg
ccttcagacacaccagaaaggtgcatcagatgccattgcagatggttgtg
agccaccatgtgggttgctgggattgaactcagaccgctggaagaacagt
agtgctcttaactgtgaagccatctctccagtcccccaccctctctttta
atgaccgagcgagcttcattaaggactgctgaaagaagcataggtgaagc
ttggttacagtgcataatcactttaaccagaggtcacaccactaacgaaa
atgtctctcgccaccccta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_8775386_8775968
seq2: B6Ng01-105D03.b_45_627 (reverse)

seq1  TGTATGTGTAAAAGTGTCAGAAACTGAAGTTACAGACTGTTGTGAGCTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGTGTAAAAGTGTCAGAAACTGAAGTTACAGACTGTTGTGAGCTAC  50

seq1  CATTGTTGTGGGTGCTGGGACTTGAACCTGGGTCCTCTGGAAGAGCAGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTTGTGGGTGCTGGGACTTGAACCTGGGTCCTCTGGAAGAGCAGTC  100

seq1  ATTATTCTTAACCACTGAGCCATCTCTCTAGCCCTCGTTTTTTAGTTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTCTTAACCACTGAGCCATCTCTCTAGCCCTCGTTTTTTAGTTTTT  150

seq1  TTTTTTGTTTTGTTTTGTTTTTTGTTTTTTTAAGATTTTCTTATTTATTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGTTTTGTTTTGTTTTTTGTTTTTTTAAGATTTTCTTATTTATTA  200

seq1  TATGTAAGTACACTGTAGCTGTCTTCAGACACTCCAGAAGAGGGCGCCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTAAGTACACTGTAGCTGTCTTCAGACACTCCAGAAGAGGGCGCCAG  250

seq1  ATCTCGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATTGAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATTGAAC  300

seq1  TCCAGACCTTTGGAAGAGCAGTCAGTGCTCTTAACTGCTGAGCCATCTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGACCTTTGGAAGAGCAGTCAGTGCTCTTAACTGCTGAGCCATCTCT  350

seq1  CCAGCCCCGTTTTTTAGGTTTTTGAAGACAGGGTTTCCTGTGTAGCTCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCCCGTTTTTTAGGTTTTTGAAGACAGGGTTTCCTGTGTAGCTCTA  400

seq1  GCTGTCCAGGAACTAGCTCTGTAGACCAGGTTGGCCTCAAATTTAGAGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCCAGGAACTAGCTCTGTAGACCAGGTTGGCCTCAAATTTAGAGAT  450

seq1  TTGCCTGTCTCTCTGCCTCTCGAGAGCTGGGATTAAAAGTGTGCAGCCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTGTCTCTCTGCCTCTCGAGAGCTGGGATTAAAAGTGTGCAGCCCA  500

seq1  ACAATCTACTCAAAGTAGGTTTTGAAAAAGCTTTCCATATTAGGAGTTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATCTACTCAAAGTAGGTTTTGAAAAAGCTTTCCATATTAGGAGTTAA  550

seq1  CTAGCTTCATTTCAGAAATACTGCATGGAATTC  583
      |||||||||||||||||||||||||||||||||
seq2  CTAGCTTCATTTCAGAAATACTGCATGGAATTC  583

seq1: chr12_8660039_8661111
seq2: B6Ng01-105D03.g_66_1134

seq1  GAATTCTTTAAAGTGAGCGTGTGCACAGAGATAGCAAGTATTTGGGCCGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAAAGTGAGCGTGTGCACAGAGATAGCAAGTATTTGGGCCGG  50

seq1  CTCAATGGATGGAGGTGTTTGGCTGATGACCTGGAATTGGCGTGATAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAATGGATGGAGGTGTTTGGCTGATGACCTGGAATTGGCGTGATAGCA  100

seq1  GGACAGCTAACGTCTGCAGATTGGTCCAAGAAGAAATGCTTTCCCTGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGCTAACGTCTGCAGATTGGTCCAAGAAGAAATGCTTTCCCTGGAA  150

seq1  GTATTCATTTCACTGGAATGTTCATACCTGTAATCCCAACACTTGGTAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTCATTTCACTGGAATGTTCATACCTGTAATCCCAACACTTGGTAGG  200

seq1  CTGAAACAAGATTGATACACGTTCAAGACCAACCTGGGCTACATATTGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAACAAGATTGATACACGTTCAAGACCAACCTGGGCTACATATTGAG  250

seq1  TTCTAGGCTAGTTGGTGCTATCCAGATAGACTCTATCTCAAAACAAACAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGGCTAGTTGGTGCTATCCAGATAGACTCTATCTCAAAACAAACAA  300

seq1  TAATCAGAAATACCGCTCATTCCAAGCCAGGCTTCATGAGCCCAGGAACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCAGAAATACCGCTCATTCCAAGCCAGGCTTCATGAGCCCAGGAACC  350

seq1  AGATCAGGCAAAGCAGAACTCAGAGAGAATGCTACAGTGAATAAGGATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCAGGCAAAGCAGAACTCAGAGAGAATGCTACAGTGAATAAGGATGA  400

seq1  GGTCGGTGGAGACAAGACAGGATCAAGTCTAGAGTGTGAAGAAGTTTGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCGGTGGAGACAAGACAGGATCAAGTCTAGAGTGTGAAGAAGTTTGAC  450

seq1  TTAATGTGAGAATGTCCCCCCATCCAATATAGAGTCCATAATGCAAAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGTGAGAATGTCCCCCCATCCAATATAGAGTCCATAATGCAAAAAT  500

seq1  GTCCAGACACACATGACACATGGTTAAAGATCACTTGAAATATGGTTTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAGACACACATGACACATGGTTAAAGATCACTTGAAATATGGTTTGT  550

seq1  ACAACTGAGAAACTGTGCTTTTTTCAAGTGTTCTTTTTTTTCAGTGTATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTGAGAAACTGTGCTTTTTTCAAGTGTTCTTTTTTTTCAGTGTATA  600

seq1  TTAATTATACACGAGAATGGGTTCATTACTACATCTTCCTACAGTTTATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTATACACGAGAATGGGTTCATTACTACATCTTCCTACAGTTTATA  650

seq1  ATTATGTGTTTCATTCATATTTGTCTTTGTTACCATCTCTTGTCCCTTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGTGTTTCATTCATATTTGTCTTTGTTACCATCTCTTGTCCCTTCC  700

seq1  CCACTCACGCTGAACGACCCCCTCTTCCCAGCTAGACCCCTAGTTTAGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTCACGCTGAACGACCCCCTCTTCCCAGCTAGACCCCTAGTTTAGTG  750

seq1  CCTTTAAAAAAAACATTATTTATTTTATGTGTATGAGTGCACTCTCACTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAAAAAAAACATTATTTATTTTATGTGTATGAGTGCACTCTCACTG  800

seq1  CCTTCAGACACACCAGAAAGGTGCATCAGATGCCATTGCAGATGGTTGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCAGACACACCAGAAAGGTGCATCAGATGCCATTGCAGATGGTTGTG  850

seq1  AGCCACCATGT-GGTTGCTGGGAATTGAACTCAGGACCGCTGGAAGAACA  899
      ||||||||||| |||||||||| |||||||||| ||||||||||||||||
seq2  AGCCACCATGTGGGTTGCTGGG-ATTGAACTCA-GACCGCTGGAAGAACA  898

seq1  GTAGTGCTCTTAACTGTTGAGCCATCTCTCCAGTCCCCCCACCCTCTTCT  949
      |||||||||||||||||  ||||||||||||||| ||||||||||| |||
seq2  GTAGTGCTCTTAACTGTGAAGCCATCTCTCCAGT-CCCCCACCCTC-TCT  946

seq1  TTTAATGACCGAGCGAGCTTCATT-AGGACTGCTGACAGAAGCATAGGTG  998
      |||||||||||||||||||||||| ||||||||||| |||||||||||||
seq2  TTTAATGACCGAGCGAGCTTCATTAAGGACTGCTGAAAGAAGCATAGGTG  996

seq1  AAGCTTTGTTTACAGGTGCATAAGCACCTTAACCAGAGGCCACACCACTA  1048
      |||| ||| ||||| |||||||| ||| ||||||||||| ||||||||||
seq2  AAGC-TTGGTTACA-GTGCATAATCACTTTAACCAGAGGTCACACCACTA  1044

seq1  ACGAAAATGTCTCTCGCCACCCCTA  1073
      |||||||||||||||||||||||||
seq2  ACGAAAATGTCTCTCGCCACCCCTA  1069