BAC Information

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BAC

Clone NameB6Ng01-105G19
Chromosome12 (Build37)
Map Location 94,087,819 - 94,089,024
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039367, EG432681, LOC667589, LOC100039387, LOC100039425, LOC628116
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-105G19.bB6Ng01-105G19.g
ACCDH913452DH913453
length1,205915
definitionDH913452|Mus musculus domesticus DNA, BAC clone: B6Ng01-105G19, 5' end.DH913453|Mus musculus domesticus DNA, BAC clone: B6Ng01-105G19, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctttgagatattggagttttaggattccaaagttgtttttctct
tcctgtgctctcacttaacatattaattttaaatttatgaaaatactttt
attctatacgattgtgccttaataaaatttttcaaaaaagaagaaaataa
tatcaaatatgcatggactatactgatttccatatttctttattattttc
atctacttgtatatggctttctttattgccctgtaggtttagaataattg
tcatccttctattcagaacagttttgaggagaaagagcatcatcaaaaaa
atctaaaatatataaaaatagatctaattctagtagcctttctatatcta
acataccatgatacaaacataataaaacaagaacatgcaatacaaaatac
tgatcatttgctactatacatatttttacaagtacaaatttacttagaga
gtgttggaaaatatatcgcatattgagacactctgcatgagttattcttt
aaaaaaatcactaaacttataacattaaatacttattttcttcatttcta
tttgatagagtaaaattcaatttcatttatcaatattgtagatagtttct
tacgttaaatgaaaaatgtcttcagaactattctttccataagtacaaat
actctataatcatagatgttttaaaactgaataccactacataaaggata
acttgtgcactggagtcagagtgatagtataatattaaaccatagaaaat
ggtaaaattcttaccatatattactcttcttcagtcattatagtatcatg
attgtatgcatagacagtaatttgcacaatgtcaaaaccatgttggaaac
tacataaacatgttatgttaatgttaaaatcatatttagttagactaaaa
actagaatataatcttataaaattacttgcaagattcattccttataata
tattttatatactataaaaatcatagttcacaggatcatggaaagttatt
ttcatttgtctgcttggaagaaacctcattataatttagaaggttgtgat
aattaagaatatcattttaatatatatttaaaaaaaaacatttattgaca
ttctttataaagggttctttgctgtgaacagacaccatgaactaaggcca
ctcttataataggaaacatttaattgaggctggtctttcaggttcaagtt
cagtc

gaattcacacaaacagaaatgatgaaatgccatgataaaattggtgcctc
tcagataccatgcttaacaaatctcttttctgaacagagatagggagatt
cattttccaaatgactttgcagacctcactacatatttcatgagagaaaa
aaaaaaaacaagaaacaaacaaacaaaacccccaaactcatgaagtcatg
cagttgccaatgaaacaaaatgtcatctcatgattgaagcaagaagctta
gattacttgataattttaatatgcactgatttaattagaattggagatag
agaggaaatgctgaatctcagaacagtcactccaattttattgcctctac
cacctaagcaacttttcactgataaaggacacttgaataccagtagttat
agcctttctacccctgcttttagttatttattattatcataatgacattt
aaaaatatagactagaagttgaggaatctaattttttaataattatggct
tttttttctgaaatgggggtgtaggttaaaactttgtcagctaacatgag
ggctgtccacttttatgaccggttcaacagagaaatcctcctttgtatta
aacttaaaaattaaaactttaaatgttttctccggacccaaaaacttaaa
aagctggttggttgcttgttttgacaaatttagcccaatggggtcttgat
cccttaaaaaagaagacttaccaaaaacttttggtttaaattcggaaaca
aaaaatccgaaaaaatttcaaaaaaaaaatctttatccccggaaagaatt
gcaagaagggggttttcttcttctataggcgggaaaagatctcattattt
gtctattccctgttctgcaataggacactctcacaattattttttaaaac
tcccctagtttgtaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_94087819_94089024
seq2: B6Ng01-105G19.b_46_1250

seq1  GAATTCCTTTGAGATATTGGAGTTTTAGGATTCCAAAGTTGTTTTTCTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTGAGATATTGGAGTTTTAGGATTCCAAAGTTGTTTTTCTCT  50

seq1  TCCTGTGCTCTCACTTAACATATTAATTTTAAATTTATGAAAATACTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTGCTCTCACTTAACATATTAATTTTAAATTTATGAAAATACTTTT  100

seq1  ATTCTATACGATTGTGCCTTAATAAAATTTTTCAAAAAAGAAGAAAATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTATACGATTGTGCCTTAATAAAATTTTTCAAAAAAGAAGAAAATAA  150

seq1  TATCAAATATGCATGGACTATACTGATTTCCATATTTCTTTATTATTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAAATATGCATGGACTATACTGATTTCCATATTTCTTTATTATTTTC  200

seq1  ATCTACTTGTATATGGCTTTCTTTATTGCCCTGTAGGTTTAGAATAATTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTACTTGTATATGGCTTTCTTTATTGCCCTGTAGGTTTAGAATAATTG  250

seq1  TCATCCTTCTATTCAGAACAGTTTTGAGGAGAAAGAGCATCATCAAAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCCTTCTATTCAGAACAGTTTTGAGGAGAAAGAGCATCATCAAAAAA  300

seq1  ATCTAAAATATATAAAAATAGATCTAATTCTAGTAGCCTTTCTATATCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAAAATATATAAAAATAGATCTAATTCTAGTAGCCTTTCTATATCTA  350

seq1  ACATACCATGATACAAACATAATAAAACAAGAACATGCAATACAAAATAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACCATGATACAAACATAATAAAACAAGAACATGCAATACAAAATAC  400

seq1  TGATCATTTGCTACTATACATATTTTTACAAGTACAAATTTACTTAGAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCATTTGCTACTATACATATTTTTACAAGTACAAATTTACTTAGAGA  450

seq1  GTGTTGGAAAATATATCGCATATTGAGACACTCTGCATGAGTTATTCTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTGGAAAATATATCGCATATTGAGACACTCTGCATGAGTTATTCTTT  500

seq1  AAAAAAATCACTAAACTTATAACATTAAATACTTATTTTCTTCATTTCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAATCACTAAACTTATAACATTAAATACTTATTTTCTTCATTTCTA  550

seq1  TTTGATAGAGTAAAATTCAATTTCATTTATCAATATTGTAGATAGTTTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATAGAGTAAAATTCAATTTCATTTATCAATATTGTAGATAGTTTCT  600

seq1  TACGTTAAATGAAAAATGTCTTCAGAACTATTCTTTCCATAAGTACAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGTTAAATGAAAAATGTCTTCAGAACTATTCTTTCCATAAGTACAAAT  650

seq1  ACTCTATAATCATAGATGTTTTAAAACTGAATACCACTACATAAAGGATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTATAATCATAGATGTTTTAAAACTGAATACCACTACATAAAGGATA  700

seq1  ACTTGTGCACTGGAGTCAGAGTGATAGTATAATATTAAACCATAGAAAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTGCACTGGAGTCAGAGTGATAGTATAATATTAAACCATAGAAAAT  750

seq1  GGTAAAATTCTTACCATATATTACTCTTCTTCAGTCATTATAGTATCATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAAATTCTTACCATATATTACTCTTCTTCAGTCATTATAGTATCATG  800

seq1  ATTGTATGCATAGACAGTAATTTGCACAATGTCAAAACCATGTTGGAAAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTATGCATAGACAGTAATTTGCACAATGTCAAAACCATGTTGGAAAC  850

seq1  TACATAAACATGTTATGTTAATGTTAAAATCATATTTAGTTAGACTAAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATAAACATGTTATGTTAATGTTAAAATCATATTTAGTTAGACTAAAA  900

seq1  ACTAGAATATAATCTTATAAAAATTACTTGCAAGATTCATTCCTTATAAT  950
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  ACTAGAATATAATCTTAT-AAAATTACTTGCAAGATTCATTCCTTATAAT  949

seq1  ATATTTTATATACTATAAAAATCATAGTTCACAGGATCAT-GAAAGTTA-  998
      |||||||||||||||||||||||||||||||||||||||| |||||||| 
seq2  ATATTTTATATACTATAAAAATCATAGTTCACAGGATCATGGAAAGTTAT  999

seq1  TTTCATTTGTCTGCTTGAAAGAAACTCAATTATTAATTTAGAAGGTTTGT  1048
      ||||||||||||||||| |||||||   |||| |||||||||||| ||||
seq2  TTTCATTTGTCTGCTTGGAAGAAACCTCATTA-TAATTTAGAAGG-TTGT  1047

seq1  GATTAATTAGAATATCATTTTAAATATAAAATTAAAAAAAAACATTTTAT  1098
      ||| | | ||||||||||||| |||||| | ||||||||||||| |||||
seq2  GATAATTAAGAATATCATTTT-AATATATATTTAAAAAAAAACA-TTTAT  1095

seq1  TGACA-TCTTAATAAGGGTTTCATTGCTGTGAACAGACACCATG-ACCAA  1146
      ||||| |||| |||| || ||| ||||||||||||||||||||| || ||
seq2  TGACATTCTTTATAAAGGGTTCTTTGCTGTGAACAGACACCATGAACTAA  1145

seq1  AGCAACTCTTATAA-AGGAAACATTTAATTGAGGCT-GTCTTACAGGTTC  1194
       || |||||||||| ||||||||||||||||||||| ||||| |||||||
seq2  GGCCACTCTTATAATAGGAAACATTTAATTGAGGCTGGTCTTTCAGGTTC  1195

seq1  AGAGGTTCAGTC  1206
        | ||||||||
seq2  --AAGTTCAGTC  1205


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