BAC Information

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BAC

Clone NameB6Ng01-105H20
Chromosome12 (Build37)
Map Location 36,412,385 - 36,412,931
singlet/doubletsinglet
Overlap genenone
Upstream gene4921508M14Rik, Prps1l1, Snx13, Ahr, LOC100043575
Downstream geneLOC629758, LOC100043579, LOC669866, Agr3, Agr2, Tspan13, EG432649, Bzw2, Ankmy2, 1700108M19Rik, Sostdc1, 4930579E17Rik, LOC638858
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-105H20.bB6Ng01-105H20.g
ACCDH913500DH913501
length9911,095
definitionDH913500|Mus musculus domesticus DNA, BAC clone: B6Ng01-105H20, 5' end.DH913501|Mus musculus domesticus DNA, BAC clone: B6Ng01-105H20, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacctaagtcagaatgctgtgggacagcaatgttcaaaattaccc
ccaaatgggacctcataaaactgcaaagcttctgtaaggcaaaagacact
gtcaataagataaaaaggctaccaacaggggaaaggatctttacctatcc
taaatcagatagaggactaatatctaatatatacaaagaactcaagaaga
tggacaccagaaaatcaaataaccctattaaaaatggggtacagagctaa
acaaataattctcaactgaggaatacggaagggctgagaagcacctgaaa
aaaatgttcaacatccttaattatcagggaaatgcaaatcaaaacaactc
tgagattctacctcacaccagtcagaatgtctaagatcaaaaattcaggt
aacagcagatgctggtgaggatgtggagaaagagggacactttccattgt
tggtgaaattgcaaacttgtacaacccctctggaaatcagtctggcggtt
cctcagaaaattggacatagtactatcagaagattcagcaattcctctcc
tgggcatatacccagaagatgttccaaccagtaataaggacacatgctcc
actatgttcatagcagccttattgataatagccagaagctggaaataacc
cagatgtccctcaacagaggaatggatacagaaaatgtgatgcgtttaca
caatggagtactactcagcaaattaaaaacaacgaattcatgaaattctt
aggcaaatggatacatctggagggtatcatcctgagtgaggtaacccaat
cacaaaagaacacacatgatgtgcactcactgagcagatattagcccaga
aaacttacaatatccaagatacaatttgcaaatcacatggaaactcaaga
aggagactaaagtgtggatacttcatcccttccttagaatgggaacaaaa
tacccatggaaggatttacagagacaagttcagagctgaga
gaattcaggttttgaacatatgtttatatgattgtctagatttccttatt
ttctattattatgtccctctttattttctgattttgttaatttggatatt
ttctctgtgtcccttagttagtttggataacagtttcagccttcagtttg
attattccttgccatctacctctctttggtgtgcttggtgtgctgttaag
ctgcaagtatgagattgctctaatttcttcatgtaggaaacttagtgctg
tgaatttttttttcttagcatgtttttctttgtatcatataagtttgggt
atgctgtgcattcttttttactgaattctataaattttttaatttctcta
tttctgtcttgaccatttttcattcaatggagggtttttaatttgacatg
agtttgttctgttgttgatgaagtccagtggtgtaataggacgcaggggt
catttcaattttctttttttgttaagacttgctttgtgactgagtgtgtg
gtcagttttggaaaagggtccatgaagtattgagaagaagatatattttt
ctgtgcttgggtgaaatgttctgtaattacttgttatatctatttgaatt
attatgtctgttagctccaatatttttctatttagtttttatctgtttga
tctgcctttggtgagagtgaggtgttgaaatctcacacaatcagtgtgtg
agggtcaatatgtgatttaagcttatagtagtgtttcttttcaaaagtgg
atgcccatgagtttggtggatagatattaagaattgcgttgtcttcatgg
tggatttttccttggatgagtatatagtatcttccccatctcttggttag
ttttggtttaaagtttattttataagctattaaaatgggctatattaact
tgcatctaagtccttagaatattttttttctaaccttaaccttgagataa
tgtctgtccatgatgtttttatgtttcttggatgcagtaggaccatttca
tagggaaaaaaccagtgacttgaatcttgccatttttgtttagctctgct
gctggggatgggaggggtgggatggcctcacctctctctcctccg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_36412385_36412931
seq2: B6Ng01-105H20.b_38_584

seq1  GAATTCACCTAAGTCAGAATGCTGTGGGACAGCAATGTTCAAAATTACCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCTAAGTCAGAATGCTGTGGGACAGCAATGTTCAAAATTACCC  50

seq1  CCAAATGGGACCTCATAAAACTGCAAAGCTTCTGTAAGGCAAAAGACACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATGGGACCTCATAAAACTGCAAAGCTTCTGTAAGGCAAAAGACACT  100

seq1  GTCAATAAGATAAAAAGGCTACCAACAGGGGAAAGGATCTTTACCTATCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAATAAGATAAAAAGGCTACCAACAGGGGAAAGGATCTTTACCTATCC  150

seq1  TAAATCAGATAGAGGACTAATATCTAATATATACAAAGAACTCAAGAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCAGATAGAGGACTAATATCTAATATATACAAAGAACTCAAGAAGA  200

seq1  TGGACACCAGAAAATCAAATAACCCTATTAAAAATGGGGTACAGAGCTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACACCAGAAAATCAAATAACCCTATTAAAAATGGGGTACAGAGCTAA  250

seq1  ACAAATAATTCTCAACTGAGGAATACGGAAGGGCTGAGAAGCACCTGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATAATTCTCAACTGAGGAATACGGAAGGGCTGAGAAGCACCTGAAA  300

seq1  AAAATGTTCAACATCCTTAATTATCAGGGAAATGCAAATCAAAACAACTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGTTCAACATCCTTAATTATCAGGGAAATGCAAATCAAAACAACTC  350

seq1  TGAGATTCTACCTCACACCAGTCAGAATGTCTAAGATCAAAAATTCAGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATTCTACCTCACACCAGTCAGAATGTCTAAGATCAAAAATTCAGGT  400

seq1  AACAGCAGATGCTGGTGAGGATGTGGAGAAAGAGGGACACTTTCCATTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCAGATGCTGGTGAGGATGTGGAGAAAGAGGGACACTTTCCATTGT  450

seq1  TGGTGAAATTGCAAACTTGTACAACCCCTCTGGAAATCAGTCTGGCGGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGAAATTGCAAACTTGTACAACCCCTCTGGAAATCAGTCTGGCGGTT  500

seq1  CCTCAGAAAATTGGACATAGTACTATCAGAAGATTCAGCAATTCCTC  547
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGAAAATTGGACATAGTACTATCAGAAGATTCAGCAATTCCTC  547