BAC Information

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BAC

Clone NameB6Ng01-107M21
Chromosome12 (Build37)
Map Location 93,528,234 - 93,616,244
singlet/doubletdoublet
Overlap genenone
Upstream gene4930534B04Rik, Tshr, Gtf2a1, Ston2, EG666955, LOC100039631, Sel1l, LOC100039367, EG432681, LOC667589, LOC100039387, LOC100039425, LOC628116
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-107M21.bB6Ng01-107M21.g
ACCDH915162DH915163
length1,119497
definitionDH915162|Mus musculus domesticus DNA, BAC clone: B6Ng01-107M21, 5' end.DH915163|Mus musculus domesticus DNA, BAC clone: B6Ng01-107M21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(93,528,234 - 93,529,370)(93,615,742 - 93,616,244)
sequence
gaattcttgattacattttttcacaagaaatcttcagagtactggacata
taaaacaaacattttgctttgttgatttaattacataatgaatgaagtat
aggagaaattaatgcacagctcattggattcatgaccattttaactcaag
tataattcagtatgtcttaatatcattctatccttggataaaatatctta
gtttttccttgtgtttaaaaacatcagtaaaattactgttcctacttttt
cccatgctatgaattcttctgctacatacttgaagtggccacgttgtgaa
ggaaatgttctattatgctccatgtgccatctgtctttctttaaccaatg
gcattgtagcaaaattctaacaagtgcaggcacaaatgtgtttggttggc
tttcactggtcttcttggtcactagctgttttacctacagctccttgtct
tcagtcccatttctctgtgtcacttgtacccaatattctcacaatggaat
gtgttcaatgctacactagctagtaagtaaatgcttctataaaactaagt
tgaacattttataaaagacttggtaaacataaattgttaacaataaataa
aattagggttaaaataaattttaaagtcaaattaggctttgtgcaatcgg
aggaaaagaagttcctagaaggatgtttcactgcaattgctttgtaaaaa
ttttgagttctgattattttcattgagaaaactaggatggagtatcttgc
actatcttggaaggtgtcatagatgtggtttcatgccagaggtttaagct
aaccatgcatggtgttacattcctataatctcaacaggctgaggtaggag
gattttgaattttggaccagcctgtgttatgtagcattgtgtaggcttga
aaacccagaacgaaaccaaataatgaacaccaacaaaagacctgagcatt
tataaagattatctaggaattgttattatctatgtaggtacataaaatgc
tgaatttctgcactcttttataattatcttcactaatattttttaacaaa
ttactaaacagtactggacaaacaatttcaatggcgagtctaaattgggt
agcatgatacaattctttc
tcttagtatgtccaaggccctgaatattatctccagtatagccaaaagaa
atgtcccgcttgatgtacaagactctaaatccagcacttggaagaaagaa
gcaggaagactgcaaatttcagagcatcctgtgctaaataacaagcttcc
gtctcaacattagctcctttttttcccagtataagtttattatttattta
ttatagaattattttgctttctcagacacctcaatcctaagtgactgaaa
aataggcttcccaaataagacatggaaatatatatatatatatatatgtt
acattaatattttaggttgtattaagtatatcttttgcacactatggcaa
aggtattgggcaaagctccaagatttcacagttgattctaaatttaaaaa
cacaagctgattttctctcctcatttctagaatagttatagatatgttat
tatattattatattatattatattatattatattatattatattgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_93528234_93529370
seq2: B6Ng01-107M21.b_45_1163

seq1  GAATTCTTGATTACATTTTTTCACAAGAAATCTTCAGAGTACTGGACATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGATTACATTTTTTCACAAGAAATCTTCAGAGTACTGGACATA  50

seq1  TAAAACAAACATTTTGCTTTGTTGATTTAATTACATAATGAATGAAGTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACAAACATTTTGCTTTGTTGATTTAATTACATAATGAATGAAGTAT  100

seq1  AGGAGAAATTAATGCACAGCTCATTGGATTCATGACCATTTTAACTCAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAAATTAATGCACAGCTCATTGGATTCATGACCATTTTAACTCAAG  150

seq1  TATAATTCAGTATGTCTTAATATCATTCTATCCTTGGATAAAATATCTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATTCAGTATGTCTTAATATCATTCTATCCTTGGATAAAATATCTTA  200

seq1  GTTTTTCCTTGTGTTTAAAAACATCAGTAAAATTACTGTTCCTACTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTCCTTGTGTTTAAAAACATCAGTAAAATTACTGTTCCTACTTTTT  250

seq1  CCCATGCTATGAATTCTTCTGCTACATACTTGAAGTGGCCACGTTGTGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATGCTATGAATTCTTCTGCTACATACTTGAAGTGGCCACGTTGTGAA  300

seq1  GGAAATGTTCTATTATGCTCCATGTGCCATCTGTCTTTCTTTAACCAATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATGTTCTATTATGCTCCATGTGCCATCTGTCTTTCTTTAACCAATG  350

seq1  GCATTGTAGCAAAATTCTAACAAGTGCAGGCACAAATGTGTTTGGTTGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTGTAGCAAAATTCTAACAAGTGCAGGCACAAATGTGTTTGGTTGGC  400

seq1  TTTCACTGGTCTTCTTGGTCACTAGCTGTTTTACCTACAGCTCCTTGTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACTGGTCTTCTTGGTCACTAGCTGTTTTACCTACAGCTCCTTGTCT  450

seq1  TCAGTCCCATTTCTCTGTGTCACTTGTACCCAATATTCTCACAATGGAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCCCATTTCTCTGTGTCACTTGTACCCAATATTCTCACAATGGAAT  500

seq1  GTGTTCAATGCTACACTAGCTAGTAAGTAAATGCTTCTATAAAACTAAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCAATGCTACACTAGCTAGTAAGTAAATGCTTCTATAAAACTAAGT  550

seq1  TGAACATTTTATAAAAGACTTGGTAAACATAAATTGTTAACAATAAATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACATTTTATAAAAGACTTGGTAAACATAAATTGTTAACAATAAATAA  600

seq1  AATTAGGGTTAAAATAAATTTTAAAGTCAAATTAGGCTTTGTGCAATCGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGGGTTAAAATAAATTTTAAAGTCAAATTAGGCTTTGTGCAATCGG  650

seq1  AGGAAAAGAAGTTCCTAGAAGGATGTTTCACTGCAATTGCTTTGTAAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAAGAAGTTCCTAGAAGGATGTTTCACTGCAATTGCTTTGTAAAAA  700

seq1  TTTTGAGTTCTGATTATTTTCATTGAGAAAACTAGGATGGAGTATCTTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAGTTCTGATTATTTTCATTGAGAAAACTAGGATGGAGTATCTTGC  750

seq1  ACTATCTTGGAAGGTGTCATAGATGTGGTTTCATGCCAGAGGTTTAAGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATCTTGGAAGGTGTCATAGATGTGGTTTCATGCCAGAGGTTTAAGCT  800

seq1  AACCATGCATGGTGTTACATTCCTATAATCTCAACAGGCTGAGGTAGGAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATGCATGGTGTTACATTCCTATAATCTCAACAGGCTGAGGTAGGAG  850

seq1  GATTTTGAATTTTGGACCAGCCTGTGTTATGTAGCATTGTGTAGGCTTGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GATTTTGAATTTTGGACCAGCCTGTGTTATGTAGCATTGTGTAGGCTTG-  899

seq1  AAAACCCAGAACGAAACCAAATAATGAACACCAACAAAAAGACCTGAGCA  950
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  AAAACCCAGAACGAAACCAAATAATGAACACCAAC-AAAAGACCTGAGCA  948

seq1  TTTATAAAAGATTATCTAGGAATTGTTATTATCTATGTAGGTACATAAAA  1000
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAT-AAAGATTATCTAGGAATTGTTATTATCTATGTAGGTACATAAAA  997

seq1  TGCTGAATTTCTGCACTCCTTTTATAATTATCTTCAACTAATATTTTTAA  1050
      ||||||||||||||||| ||||||||||||||||| |||||||||||| |
seq2  TGCTGAATTTCTGCACT-CTTTTATAATTATCTTC-ACTAATATTTTTTA  1045

seq1  ACCAAATTAACTAAACCAGTTAACTGGACCAAAACCAATTTCAAATGCAG  1100
      | |||||| |||||| ||||  |||||||   || |||||||||  ||  
seq2  A-CAAATT-ACTAAA-CAGT--ACTGGAC---AAACAATTTCAATGGC--  1085

seq1  AAGTCCATAAATTGGGTAGCATGATAACAATTCTTTC  1137
       ||||  |||||||||||||||||| |||||||||||
seq2  GAGTC--TAAATTGGGTAGCATGAT-ACAATTCTTTC  1119

seq1: chr12_93615742_93616244
seq2: B6Ng01-107M21.g_66_568 (reverse)

seq1  TACAATATAATATAATATAATATAATATAATATAATATAATAATATAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATATAATATAATATAATATAATATAATATAATATAATAATATAATA  50

seq1  ACATATCTATAACTATTCTAGAAATGAGGAGAGAAAATCAGCTTGTGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATCTATAACTATTCTAGAAATGAGGAGAGAAAATCAGCTTGTGTTT  100

seq1  TTAAATTTAGAATCAACTGTGAAATCTTGGAGCTTTGCCCAATACCTTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATTTAGAATCAACTGTGAAATCTTGGAGCTTTGCCCAATACCTTTG  150

seq1  CCATAGTGTGCAAAAGATATACTTAATACAACCTAAAATATTAATGTAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAGTGTGCAAAAGATATACTTAATACAACCTAAAATATTAATGTAAC  200

seq1  ATATATATATATATATATATTTCCATGTCTTATTTGGGAAGCCTATTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATATATATTTCCATGTCTTATTTGGGAAGCCTATTTTT  250

seq1  CAGTCACTTAGGATTGAGGTGTCTGAGAAAGCAAAATAATTCTATAATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCACTTAGGATTGAGGTGTCTGAGAAAGCAAAATAATTCTATAATAA  300

seq1  ATAAATAATAAACTTATACTGGGAAAAAAAGGAGCTAATGTTGAGACGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATAATAAACTTATACTGGGAAAAAAAGGAGCTAATGTTGAGACGGA  350

seq1  AGCTTGTTATTTAGCACAGGATGCTCTGAAATTTGCAGTCTTCCTGCTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGTTATTTAGCACAGGATGCTCTGAAATTTGCAGTCTTCCTGCTTC  400

seq1  TTTCTTCCAAGTGCTGGATTTAGAGTCTTGTACATCAAGCGGGACATTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTCCAAGTGCTGGATTTAGAGTCTTGTACATCAAGCGGGACATTTC  450

seq1  TTTTGGCTATACTGGAGATAATATTCAGGGCCTTGGACATACTAAGAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGCTATACTGGAGATAATATTCAGGGCCTTGGACATACTAAGAGAA  500

seq1  TTC  503
      |||
seq2  TTC  503