BAC Information

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BAC

Clone NameB6Ng01-108G11
Chromosome12 (Build37)
Map Location 26,668,763 - 26,886,673
singlet/doubletdoublet
Overlap genenone
Upstream geneC330002I19Rik, Id2, LOC100042973, LOC100042974, LOC668726
Downstream geneRnf144, Rsad2, Tyki, LOC668731, 1700020D12Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-108G11.bB6Ng01-108G11.g
ACCDH915598DH915599
length539687
definitionDH915598|Mus musculus domesticus DNA, BAC clone: B6Ng01-108G11, 5' end.DH915599|Mus musculus domesticus DNA, BAC clone: B6Ng01-108G11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(26,886,129 - 26,886,673)(26,668,763 - 26,669,445)
sequence
aaggatggagtactaaaaatgaatcttaaaataagacagacatttctttt
tatatttataattatcctaagtgatttcttaagatttttctctgtaggag
tcaaaaatagaaacttgaataatatctattacttatatttctctctagat
tgtgacttctaagaaggcaggcatttttgcttatataatttcccaatatc
ctagctcctatacactgcatgtagacacacacactctcaattagcataat
gcttgaaattgtaaacctcaataaatcttcaaatggagtggttgtttcaa
gttacttgatgatcattaagatgttgccatgaaacagtgtcaaccggcca
gagctcacagtgactagaccaccaacaaaagagtacacgtggagcaacct
atggctctggccgcataagtggcagaggatggccttgttggacatcagtg
ggaggagcatcccttgggcctgagggtgtttgatgccccagtgtagggga
ataccatggcaggaagaagggagtgggtaggtgggtggg
gaattccataagcacacctatagaaacatagacacagacacacagataca
cacacacacacacacacacacacacacacacccctacactaaggaccatg
tatatgcagaaataaatattgttaagggtcatattacattcagtggacat
aataatattagctactaataacaactactatttcacctgaatgcatccca
ggtaccaagcttttttaaaatcaaccctatgtgtgaatgttgtggataat
cacagcagccatgttttttctgtgaaaaaaaaaatgaaacaaacaaaaaa
aatattacttccaagtgaaatgtgttgagtgcaaaattagttctgtctgg
attctaaatccactcttgttttgttattacacattctcgtggtctttgat
tcatccctatcacgagttcttaaaaaaagaaagaagaagaagaagaagaa
gaagaagaagaagaagaagaagagaaagaaagaaagaaagaaagaaagaa
agaaagaaagaaagaaagaaagaaagaaagaaaagaaaagaaagaaagga
aagagggaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaag
aaagaaagaaagaaagaaagaaaggaaggaaggaaggaaggaaggaagga
aggaaggaaggaaggaaggaaggaaggaaggaaggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_26886129_26886673
seq2: B6Ng01-108G11.b_41_585 (reverse)

seq1  CCCACCCACCTACCCACTCCCTTCTTCCTGCCATGGTATTCCCCTACACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCCACCTACCCACTCCCTTCTTCCTGCCATGGTATTCCCCTACACT  50

seq1  GGGGCATCAAACACCCTCAGGCCCAAGGGATGCTCCTCCCACTGATGTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCATCAAACACCCTCAGGCCCAAGGGATGCTCCTCCCACTGATGTCC  100

seq1  AACAAGGCCATCCTCTGCCACTTATGCGGCCAGAGCCATAGGTTGCTCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGGCCATCCTCTGCCACTTATGCGGCCAGAGCCATAGGTTGCTCCA  150

seq1  CGTGTACTCTTTTGTTGGTGGTCTAGTCACTGTGAGCTCTGGCCGGTTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTACTCTTTTGTTGGTGGTCTAGTCACTGTGAGCTCTGGCCGGTTGA  200

seq1  CACTGTTTCATGGCAACATCTTAATGATCATCAAGTAACTTGAAACAACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTTTCATGGCAACATCTTAATGATCATCAAGTAACTTGAAACAACC  250

seq1  ACTCCATTTGAAGATTTATTGAGGTTTACAATTTCAAGCATTATGCTAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCATTTGAAGATTTATTGAGGTTTACAATTTCAAGCATTATGCTAAT  300

seq1  TGAGAGTGTGTGTGTCTACATGCAGTGTATAGGAGCTAGGATATTGGGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGTGTGTGTGTCTACATGCAGTGTATAGGAGCTAGGATATTGGGAA  350

seq1  ATTATATAAGCAAAAATGCCTGCCTTCTTAGAAGTCACAATCTAGAGAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATATAAGCAAAAATGCCTGCCTTCTTAGAAGTCACAATCTAGAGAGA  400

seq1  AATATAAGTAATAGATATTATTCAAGTTTCTATTTTTGACTCCTACAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAAGTAATAGATATTATTCAAGTTTCTATTTTTGACTCCTACAGAG  450

seq1  AAAAATCTTAAGAAATCACTTAGGATAATTATAAATATAAAAAGAAATGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATCTTAAGAAATCACTTAGGATAATTATAAATATAAAAAGAAATGT  500

seq1  CTGTCTTATTTTAAGATTCATTTTTAGTACTCCATCCTTGAATTC  545
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTTATTTTAAGATTCATTTTTAGTACTCCATCCTTGAATTC  545

seq1: chr12_26668763_26669445
seq2: B6Ng01-108G11.g_67_753

seq1  GAATTCCATAAGCACACCTATAGAAACATAGACACAGACACACAGATACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATAAGCACACCTATAGAAACATAGACACAGACACACAGATACA  50

seq1  CACACACACACACACACACACACACACACACCCCTACACTAAGGACCATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACCCCTACACTAAGGACCATG  100

seq1  TATATGCAGAAATAAATATTGTTAAGGGTCATATTACATTCAGTGGACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGCAGAAATAAATATTGTTAAGGGTCATATTACATTCAGTGGACAT  150

seq1  AATAATATTAGCTACTAATAACAACTACTATTTCACCTGAATGCATCCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATATTAGCTACTAATAACAACTACTATTTCACCTGAATGCATCCCA  200

seq1  GGTACCAAGCTTTTTTAAAATCAACCCTATGTGTGAATGTTGTGGATAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACCAAGCTTTTTTAAAATCAACCCTATGTGTGAATGTTGTGGATAAT  250

seq1  CACAGCAGCCATGTTTTTTCTGTGAAAAAAAAAATGAAACAAACAAAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCAGCCATGTTTTTTCTGTGAAAAAAAAAATGAAACAAACAAAAAA  300

seq1  AATATTACTTCCAAGTGAAATGTGTTGAGTGCAAAATTAGTTCTGTCTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTACTTCCAAGTGAAATGTGTTGAGTGCAAAATTAGTTCTGTCTGG  350

seq1  ATTCTAAATCCACTCTTGTTTTGTTATTACACATTCTCGTGGTCTTTGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTAAATCCACTCTTGTTTTGTTATTACACATTCTCGTGGTCTTTGAT  400

seq1  TCATCCCTATCACGAGTTCTTAAAAAAAGAAAGAAGAAGAAGAAGAAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCCCTATCACGAGTTCTTAAAAAAAGAAAGAAGAAGAAGAAGAAGAA  450

seq1  GAAGAAGAAGAAGAAGAAGAAG----AGAAAGAAAGAAAGAAAGAAAGAA  496
      ||||||||||||||||||||||    ||||||||||||||||||||||||
seq2  GAAGAAGAAGAAGAAGAAGAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAA  500

seq1  AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGAAAGAAAGGA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGAAAGAAAGGA  550

seq1  AAGAGGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG  600

seq1  AAAGAAAGAAAGAAAGAAAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAGAAAGAAAGAAAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGA  650

seq1  AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA  683
      |||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA  687