BAC Information

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BAC

Clone NameB6Ng01-108K11
Chromosome12 (Build37)
Map Location 90,398,580 - 90,536,976
singlet/doubletdoublet
Overlap geneNrxn3
Upstream geneLOC100039315, EG638008, EG666862, EG435337, LOC100039154, LOC633093, LOC667440, LOC100039383, EG266459, LOC667475, LOC620915, LOC435314, Adck1, LOC100039261, EG666915
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-108K11.bB6Ng01-108K11.g
ACCDH915784DH915785
length1,086892
definitionDH915784|Mus musculus domesticus DNA, BAC clone: B6Ng01-108K11, 5' end.DH915785|Mus musculus domesticus DNA, BAC clone: B6Ng01-108K11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(90,398,580 - 90,399,667)(90,536,376 - 90,536,976)
sequence
gaattctaccaggaagagaataatccagaagccagaagtcattcttggct
gcctgtgtattctatgtagcacctctcctattctatccacatgacatgat
agacaactaaaaagctgttgaacattggcaaatgttgagaaggcccgctg
tctgttactgacaccttttcatatggaccaccctgatgctcgaatgttat
gctgaccatatgcaaggccacaaatcccaaaatgacagtgctttgatatg
gggcctcttggaggcaattgggattagatgagttcatgagggtggtgctc
acatgttgacctttgcatcttcatagaaagaagagaccagagctcttttt
ttgtttgtttgttttttcgagacaggttttgtctgtgttgtcctggctgt
cctggaactcactctgtagaccaggctggcctcggactcagaaatccacc
tgcctctgtctcccaagtgctaggattaaaggcttgagccaccacgctct
tatctaagccatcaagtgactatagaagaagactttttgcatcccatgaa
gtgactccttttaagacaccttttaagtggcagatctgctgccaccttga
gtttatacttttcaacttttagtactgtgaaaaataaatattgtttaacc
cactcaatatgtgttatggtaatggtgtttattcagctcaagctagctaa
ggctctgcttcttaggggaaagagggattggagcaattctgtaggcacaa
ggttacttcctttttctccttttggaattggctagcaattggggacacag
tggtaggggctgaataaaggagaaaaacactgcaaatgaaagccttccaa
gttttgcacactttttttttttttggtatcactttagacaaatgcaatgc
cctggctctgtattataatatttggatagtgcagtccttagctgcatgca
gataccatgttaagcagctagaaaaattagcctgctgcaacagctctgat
tcagtccccctccctctcagtctttgttcactgtaaacatcaatagaaga
acagcacatgaattgtttggattttttaagagtttg
gaattctcctttacatccacaggggcaggagggaatagattgaatcgtct
taaaagccttttcaggtaacatatcttatggtaaaggtgacaacagcccg
agccacaaaggaagagaagagatgctctaaatagcccaaagcctgagcag
tgtcaatgcatgtgaaataaaggacacagcaggagaaaccattgaggtcc
caacccccaagctctaaagttaagctccggagaggtgctgtgcaccactt
tctcccagtacttgcagggttacctgggaattgtcactgctggttcagca
agaatgaatactcaccaatgtcactgtggtcagttggacttggagataat
tcacagcctgtcacccaaatcccagtcttctgcttctccttggtgtttgt
ttgtttgtttgtttgtttgttttttggtttttttctctttttctcttgga
tattttctttatttacatttcaaatgttatcctctttcctggtttcccct
ccgaaaactccctccccctaaccccttccctctccccctgctcaccatcc
cacccccttccacttcctggccctggcattcccctacactggggcataga
gccttcacaggaccaacggcctctcctcccattgatgtccgactatgcca
tcttctgctacatatgcagctggagccatgagtccctccatgtgtgctct
atggttggtggtttagtccctgggagttctgggtgtactggttagttcat
atagttgttcctcctatagggttacaaaccccttcagctccctaggtctt
tctttagctcctttatgaggaccctatgctcagtccaatggatggctttg
agcatcatttctgtatttgtcaggcactggcaggtctctcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_90398580_90399667
seq2: B6Ng01-108K11.b_42_1127

seq1  GAATTCTACCAGGAAGAGAATAATCCAGAAGCCAGAAGTCATTCTTGGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACCAGGAAGAGAATAATCCAGAAGCCAGAAGTCATTCTTGGCT  50

seq1  GCCTGTGTATTCTATGTAGCACCTCTCCTATTCTATCCACATGACATGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGTGTATTCTATGTAGCACCTCTCCTATTCTATCCACATGACATGAT  100

seq1  AGACAACTAAAAAGCTGTTGAACATTGGCAAATGTTGAGAAGGCCCGCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAACTAAAAAGCTGTTGAACATTGGCAAATGTTGAGAAGGCCCGCTG  150

seq1  TCTGTTACTGACACCTTTTCATATGGACCACCCTGATGCTCGAATGTTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTACTGACACCTTTTCATATGGACCACCCTGATGCTCGAATGTTAT  200

seq1  GCTGACCATATGCAAGGCCACAAATCCCAAAATGACAGTGCTTTGATATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGACCATATGCAAGGCCACAAATCCCAAAATGACAGTGCTTTGATATG  250

seq1  GGGCCTCTTGGAGGCAATTGGGATTAGATGAGTTCATGAGGGTGGTGCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCTCTTGGAGGCAATTGGGATTAGATGAGTTCATGAGGGTGGTGCTC  300

seq1  ACATGTTGACCTTTGCATCTTCATAGAAAGAAGAGACCAGAGCTCTTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTTGACCTTTGCATCTTCATAGAAAGAAGAGACCAGAGCTCTTTTT  350

seq1  TTGTTTGTTTGTTTTTTCGAGACAGGTTTTGTCTGTGTTGTCCTGGCTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTGTTTGTTTTTTCGAGACAGGTTTTGTCTGTGTTGTCCTGGCTGT  400

seq1  CCTGGAACTCACTCTGTAGACCAGGCTGGCCTCGGACTCAGAAATCCACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGAACTCACTCTGTAGACCAGGCTGGCCTCGGACTCAGAAATCCACC  450

seq1  TGCCTCTGTCTCCCAAGTGCTAGGATTAAAGGCTTGAGCCACCACGCTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCTGTCTCCCAAGTGCTAGGATTAAAGGCTTGAGCCACCACGCTCT  500

seq1  TATCTAAGCCATCAAGTGACTATAGAAGAAGACTTTTTGCATCCCATGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTAAGCCATCAAGTGACTATAGAAGAAGACTTTTTGCATCCCATGAA  550

seq1  GTGACTCCTTTTAAGACACCTTTTAAGTGGCAGATCTGCTGCCACCTTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACTCCTTTTAAGACACCTTTTAAGTGGCAGATCTGCTGCCACCTTGA  600

seq1  GTTTATACTTTTCAACTTTTAGTACTGTGAAAAATAAATATTGTTTAACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATACTTTTCAACTTTTAGTACTGTGAAAAATAAATATTGTTTAACC  650

seq1  CACTCAATATGTGTTATGGTAATGGTGTTTATTCAGCTCAAGCTAGCTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCAATATGTGTTATGGTAATGGTGTTTATTCAGCTCAAGCTAGCTAA  700

seq1  GGCTCTGCTTCTTAGGGGAAAGAGGGATTGGAGCAATTCTGTAGGCACAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTGCTTCTTAGGGGAAAGAGGGATTGGAGCAATTCTGTAGGCACAA  750

seq1  GGTTACTTCCTTTTTCTCCTTTTGGAATTGGCTAGCAATTGGGGACACAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTACTTCCTTTTTCTCCTTTTGGAATTGGCTAGCAATTGGGGACACAG  800

seq1  TGGTAGGGGCTGAATAAAGGAGAAAAACACTGCAAATGAAAGCCTTCCAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAGGGGCTGAATAAAGGAGAAAAACACTGCAAATGAAAGCCTTCCAA  850

seq1  GTTTTGCACACTTTTTTTTTTTTTGGTATCACTTTAGACAAATGCAATGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGCACACTTTTTTTTTTTTTGGTATCACTTTAGACAAATGCAATGC  900

seq1  CCTGGCTCTGTATTATAATATTTGGATAGTGCAGTCCTTAGCTGCATGCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCTCTGTATTATAATATTTGGATAGTGCAGTCCTTAGCTGCATGCA  950

seq1  GATACCATGTTAAGCAGCTAGAAAAA-TAGCCTGCTGCAACAGCTCCTGA  999
      |||||||||||||||||||||||||| |||||||||||||||||| ||||
seq2  GATACCATGTTAAGCAGCTAGAAAAATTAGCCTGCTGCAACAGCT-CTGA  999

seq1  TTCAGTCCCCCTCCCTCTCAGGTCTTTGTTCACTGTAAACACATCAATAG  1049
      |||||||||||||||||||| |||||||||||||||||  ||||||||||
seq2  TTCAGTCCCCCTCCCTCTCA-GTCTTTGTTCACTGTAA--ACATCAATAG  1046

seq1  -AGAACAGCACATAGATTGTTTGGTTTTTTTAAGAGTTTG  1088
       ||||||||||||  ||||||||| |||||||||||||||
seq2  AAGAACAGCACATGAATTGTTTGGATTTTTTAAGAGTTTG  1086

seq1: chr12_90536376_90536976
seq2: B6Ng01-108K11.g_70_670 (reverse)

seq1  CTCTATGCCCCAGTGTAGGGGAATGCCAGGGCCAGGAAGTGGAAGGGGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATGCCCCAGTGTAGGGGAATGCCAGGGCCAGGAAGTGGAAGGGGGT  50

seq1  GGGATGGTGAGCAGGGGGAGAGGGAAGGGGTTAGGGGGAGGGAGTTTTCG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGGTGAGCAGGGGGAGAGGGAAGGGGTTAGGGGGAGGGAGTTTTCG  100

seq1  GAGGGGAAACCAGGAAAGAGGATAACATTTGAAATGTAAATAAAGAAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGAAACCAGGAAAGAGGATAACATTTGAAATGTAAATAAAGAAAAT  150

seq1  ATCCAAGAGAAAAAGAGAAAAAAACCAAAAAACAAACAAACAAACAAACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAAGAGAAAAAGAGAAAAAAACCAAAAAACAAACAAACAAACAAACA  200

seq1  AACAAACACCAAGGAGAAGCAGAAGACTGGGATTTGGGTGACAGGCTGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAACACCAAGGAGAAGCAGAAGACTGGGATTTGGGTGACAGGCTGTG  250

seq1  AATTATCTCCAAGTCCAACTGACCACAGTGACATTGGTGAGTATTCATTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATCTCCAAGTCCAACTGACCACAGTGACATTGGTGAGTATTCATTC  300

seq1  TTGCTGAACCAGCAGTGACAATTCCCAGGTAACCCTGCAAGTACTGGGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGAACCAGCAGTGACAATTCCCAGGTAACCCTGCAAGTACTGGGAG  350

seq1  AAAGTGGTGCACAGCACCTCTCCGGAGCTTAACTTTAGAGCTTGGGGGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGGTGCACAGCACCTCTCCGGAGCTTAACTTTAGAGCTTGGGGGTT  400

seq1  GGGACCTCAATGGTTTCTCCTGCTGTGTCCTTTATTTCACATGCATTGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACCTCAATGGTTTCTCCTGCTGTGTCCTTTATTTCACATGCATTGAC  450

seq1  ACTGCTCAGGCTTTGGGCTATTTAGAGCATCTCTTCTCTTCCTTTGTGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTCAGGCTTTGGGCTATTTAGAGCATCTCTTCTCTTCCTTTGTGGC  500

seq1  TCGGGCTGTTGTCACCTTTACCATAAGATATGTTACCTGAAAAGGCTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGGCTGTTGTCACCTTTACCATAAGATATGTTACCTGAAAAGGCTTTT  550

seq1  AAGACGATTCAATCTATTCCCTCCTGCCCCTGTGGATGTAAAGGAGAATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACGATTCAATCTATTCCCTCCTGCCCCTGTGGATGTAAAGGAGAATT  600

seq1  C  601
      |
seq2  C  601