BAC Information

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BAC

Clone NameB6Ng01-109I12
Chromosome12 (Build37)
Map Location 7,706,217 - 7,870,979
singlet/doubletdoublet
Overlap geneEG668388
Upstream geneLOC668380
Downstream geneApob, 1110057K04Rik, Gdf7, Hs1bp3, BC106175, Rhob, Slc7a15, LOC100043154, Pum2, F730043H23, Sdc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-109I12.bB6Ng01-109I12.g
ACCDH916415DH916416
length635955
definitionDH916415|Mus musculus domesticus DNA, BAC clone: B6Ng01-109I12, 5' end.DH916416|Mus musculus domesticus DNA, BAC clone: B6Ng01-109I12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,706,217 - 7,706,851)(7,870,431 - 7,870,979)
sequence
gaattcacaagaaatagagcctctgggttgctctgttactgagcatggtg
acaacactgaactttctgctatagacaactgaaaagactaggctttgtga
ttgatcataaagagcaaatatattaaataatttatccaagaaaagaaagg
agatttaaaattgaaagatatcactgaggctatatttagatttaaagcat
ttctaaagtgtaagaaacgtaaacctcaaatagatcataaatagccataa
atagaattaaaacattggttcatagtagtgcaacatggctgaatcaccag
cactaaccgagagagctcagtcgtgagaggccatgctttccgcattcctt
tgtgttctccaaaatagacaaatccacggaagcaaatgataaattagtgg
agaacaggatgtgggaggagagagaaataaaaagagattcaaatgagcac
aggtttgttttagagacatgaaaaaactgccttaccccttcagtaggagt
ggctctagctgtatatgtagcacagggtggttttgttggtcatcaatggg
aggagaggcccttggtcctgtgaaggctctatactttagtataggggaag
gctagggtcaggaatgggagtgggtaggttgggga

gaattctcaattgatgatttaggtgatcaatccacagtgttccactcacc
tttcagatgtttaaggacatcttgttatagtcagacttccatttgatgtt
gagaattcagctttaaatctgactggctttcttttaaaacaattatcctg
ccttctcccctgtttgttcttaagaatccatcttcattatcaaagaatgt
ttgtataatatgtctctgcttgtagctttctaattcttctgtttggagtg
tgatcacatttttaaaatttaatttaatttttaatttattttttacactc
catattccattccccgcccccccatccaccctccctctgctccatatccc
acacctgctccccgccccacacattttaatattttttgaagttctgtttt
gttgactccttagacatgaaatctttaaatatttactgcatcccttacct
ctctctcttgcgtgagagcccagccaccaccatgctaaaggttttgactg
tcccatgtcccacacagtttccttcttttctcacccctttgtgctctgtt
gcagtctacatatcttcctatagctctgtgtaactcaacatattctgaac
tcagtactgaattcttgggtctgtgactttcatcagagtttttaaaagaa
tctccattttatcttgtccttggctatgcaaatcagtcaccccacgtcct
atttaatccctccaggatcagaattgcctgactgtttgttttgttctgtt
ggttttctgccaagcattatattgctcacttttgactgactacaaaacac
tgtttggggaagccagcgacatcatcttgtcttggatgagatacttttgc
taaacacagactaccttaacatggcaggaactgacatgtctttggtgcta
tgcttactctgttggttcatctatcctcgaagttggtgcttgtctctata
ggagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_7706217_7706851
seq2: B6Ng01-109I12.b_49_683

seq1  GAATTCACAAGAAATAGAGCCTCTGGGTTGCTCTGTTACTGAGCATGGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAAGAAATAGAGCCTCTGGGTTGCTCTGTTACTGAGCATGGTG  50

seq1  ACAACACTGAACTTTCTGCTATAGACAACTGAAAAGACTAGGCTTTGTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACACTGAACTTTCTGCTATAGACAACTGAAAAGACTAGGCTTTGTGA  100

seq1  TTGATCATAAAGAGCAAATATATTAAATAATTTATCCAAGAAAAGAAAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATCATAAAGAGCAAATATATTAAATAATTTATCCAAGAAAAGAAAGG  150

seq1  AGATTTAAAATTGAAAGATATCACTGAGGCTATATTTAGATTTAAAGCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTAAAATTGAAAGATATCACTGAGGCTATATTTAGATTTAAAGCAT  200

seq1  TTCTAAAGTGTAAGAAACGTAAACCTCAAATAGATCATAAATAGCCATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAAGTGTAAGAAACGTAAACCTCAAATAGATCATAAATAGCCATAA  250

seq1  ATAGAATTAAAACATTGGTTCATAGTAGTGCAACATGGCTGAATCACCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAATTAAAACATTGGTTCATAGTAGTGCAACATGGCTGAATCACCAG  300

seq1  CACTAACCGAGAGAGCTCAGTCGTGAGAGGCCATGCTTTCCGCATTCCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAACCGAGAGAGCTCAGTCGTGAGAGGCCATGCTTTCCGCATTCCTT  350

seq1  TGTGTTCTCCAAAATAGACAAATCCACGGAAGCAAATGATAAATTAGTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTCTCCAAAATAGACAAATCCACGGAAGCAAATGATAAATTAGTGG  400

seq1  AGAACAGGATGTGGGAGGAGAGAGAAATAAAAAGAGATTCAAATGAGCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAGGATGTGGGAGGAGAGAGAAATAAAAAGAGATTCAAATGAGCAC  450

seq1  AGGTTTGTTTTAGAGACATGAAAAAACTGCCTTACCCCTTCAGTAGGAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTGTTTTAGAGACATGAAAAAACTGCCTTACCCCTTCAGTAGGAGT  500

seq1  GGCTCTAGCTGTATATGTAGCACAGGGTGGTTTTGTTGGTCATCAATGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTAGCTGTATATGTAGCACAGGGTGGTTTTGTTGGTCATCAATGGG  550

seq1  AGGAGAGGCCCTTGGTCCTGTGAAGGCTCTATACTTTAGTATAGGGGAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAGGCCCTTGGTCCTGTGAAGGCTCTATACTTTAGTATAGGGGAAG  600

seq1  GCTAGGGTCAGGAATGGGAGTGGGTAGGTTGGGGA  635
      |||||||||||||||||||||||||||||||||||
seq2  GCTAGGGTCAGGAATGGGAGTGGGTAGGTTGGGGA  635


seq1: chr12_7870431_7870979
seq2: B6Ng01-109I12.g_68_616 (reverse)

seq1  ACAGAGCACAAAGGGGTGAGAAAAGAAGGAAACTGTGTGGGACATGGGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGCACAAAGGGGTGAGAAAAGAAGGAAACTGTGTGGGACATGGGAC  50

seq1  AGTCAAAACCTTTAGCATGGTGGTGGCTGGGCTCTCACGCAAGAGAGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAAAACCTTTAGCATGGTGGTGGCTGGGCTCTCACGCAAGAGAGAGA  100

seq1  GGTAAGGGATGCAGTAAATATTTAAAGATTTCATGTCTAAGGAGTCAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAGGGATGCAGTAAATATTTAAAGATTTCATGTCTAAGGAGTCAACA  150

seq1  AAACAGAACTTCAAAAAATATTAAAATGTGTGGGGCGGGGAGCAGGTGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGAACTTCAAAAAATATTAAAATGTGTGGGGCGGGGAGCAGGTGTG  200

seq1  GGATATGGAGCAGAGGGAGGGTGGATGGGGGGGCGGGGAATGGAATATGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATGGAGCAGAGGGAGGGTGGATGGGGGGGCGGGGAATGGAATATGG  250

seq1  AGTGTAAAAAATAAATTAAAAATTAAATTAAATTTTAAAAATGTGATCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTAAAAAATAAATTAAAAATTAAATTAAATTTTAAAAATGTGATCAC  300

seq1  ACTCCAAACAGAAGAATTAGAAAGCTACAAGCAGAGACATATTATACAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCAAACAGAAGAATTAGAAAGCTACAAGCAGAGACATATTATACAAA  350

seq1  CATTCTTTGATAATGAAGATGGATTCTTAAGAACAAACAGGGGAGAAGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTTTGATAATGAAGATGGATTCTTAAGAACAAACAGGGGAGAAGGC  400

seq1  AGGATAATTGTTTTAAAAGAAAGCCAGTCAGATTTAAAGCTGAATTCTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATAATTGTTTTAAAAGAAAGCCAGTCAGATTTAAAGCTGAATTCTCA  450

seq1  ACATCAAATGGAAGTCTGACTATAACAAGATGTCCTTAAACATCTGAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCAAATGGAAGTCTGACTATAACAAGATGTCCTTAAACATCTGAAAG  500

seq1  GTGAGTGGAACACTGTGGATTGATCACCTAAATCATCAATTGAGAATTC  549
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTGGAACACTGTGGATTGATCACCTAAATCATCAATTGAGAATTC  549


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