BAC Information

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BAC

Clone NameB6Ng01-112E12
Chromosome12 (Build37)
Map Location 72,848,712 - 72,980,130
singlet/doubletdoublet
Overlap geneDaam1, LOC666213
Upstream geneFrmd6, Actr10, Psma3, 3110056K07Rik, Arid4a, Timm9, LOC100041035, 2700049A03Rik, LOC666162, Dact1, LOC100041190
Downstream geneLOC666220, Gpr135, LOC100041239, 2810055F11Rik, 1200003C05Rik, 4930403N07Rik, Rtn1, Lrrc9, 1810048J11Rik, LOC209183, LOC100041323, Dhrs7, LOC100041157, 5033425G24Rik, Ppm1a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-112E12.bB6Ng01-112E12.g
ACCDH918385DH918386
length1,004932
definitionDH918385|Mus musculus domesticus DNA, BAC clone: B6Ng01-112E12, 5' end.DH918386|Mus musculus domesticus DNA, BAC clone: B6Ng01-112E12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(72,979,124 - 72,980,130)(72,848,712 - 72,849,641)
sequence
gaattccaaaccagagtgcaaagataaccaaagtggtacagtactgacac
aaagacagacacacagaccagcaggacaaaccacagccctgaccaggccc
acccacacgtgatcaaggcatgctcattcacagaggtgccaagaccactc
aatggggaacaacagtctcttcatcaaatggcacagaaaagcaagctatc
cacatgcagaagggtagtgtggggttgctatcttatactggatataaaaa
taaataaaaatagactggagacctagtaccaagtcgaaaactataaaatt
tttttaaaaaaattgaaagtataggtctttatgccactggatttgattac
tcttcttggacagacaacagaagcagacaagaggcacctggtgaaacttg
gagcctgttcataatgggcagtgaagaggcggcctgtggaacctgggagg
aggtttaacatccaaaactcctataagccaacaccacggacaaaaatcac
tgttatatagacaatggacctgaggaaatattgtgcagggttagcatgca
tgtaaagagagtaacactatacacagtatcaagtttagagcattgcatgt
ccgcatccattaaacggctgctactcagagataggaacaaaccagcaagt
acaagggctaggatgtggtgtgcaaatggaccactgctgtagctggtggg
ataaacagtacaataacaaaagaaatcagtaggagggtcttaaaactttt
agttttaccagatgaataggtttggactgtttaacaataatagaaatata
agcatggtaatttttaaaaaaataggcaattttcaatcaagcttcctcaa
cgtgccaggcagttctgatcagcttgaatcctctccacaacaaagagcag
acagcccgcgcctccctctgtgcccctactccccccccctctccccactg
cgcctctgctgcacatgctcgtctagaatgccccatggctgtgatttccc
cttc
gaattctgaatggaaataaaacttccctgctaacctgtatgtcaccttga
aggcctgccagagtccgccaaccctgaagggtctacacaggattccctag
cgttcaaagctgtcaatgttctaggtcctgggtcccatctggctagctac
tttccagggcagtccagtaacgtaaatacagtctcagactgagggactat
caatatgtcagctaatacggtgccccgggaaagaatcgggagctgggacg
ctgggactgtggggctcaggtttgtgttctcctcatgacctctcagcctg
gcttttatcacgatggccgcagctgttcaccccagccgaagtgggccact
cgcaatgagatccacacctcagctgaactgggtagagctagggaaacaag
aaatctgtttgttttaacttattttagtaatgactcggaggctgtttcct
gtctctggtgatgttgcctagaaaccctatgattctgagttgaatccaag
ttgcaaatggaacatttggcaaagcctggggaaacgctcttggaatcctg
ttgtcgtggagataactttttaatccacattaactctgcgtgcgtcttac
acatatgtgcaactgcagaaatataagaaactgtgtccttttggttgtca
gcttatgtgtcatatggggtggggggaatattttcttcttttccctaagt
ccctgccccagaataaagcaatgcttccattaaatagatgatattgggaa
gaaaccctttgtctgttttccctgcttttttattcatggttccaaagagg
gaggttgatcaacgctagcatgggacctagttttgtctttgggaaagggc
tcagtgtgccgacatgagtgtcatgtgctccctcctcctcctcctcctct
ctcactctctctcttttctctctctctctctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_72979124_72980130
seq2: B6Ng01-112E12.b_51_1054 (reverse)

seq1  GAAGTGGGAAATCACAGCAATGGGGCATTCTAGACGTGCATGTGCAGCAG  50
      |||| ||||||||||||| ||||||||||||||||| |||||||||||||
seq2  GAAG-GGGAAATCACAGCCATGGGGCATTCTAGACGAGCATGTGCAGCAG  49

seq1  AGGCGCAGTGGGGAGAGGGGGGGGGAGTAGGGGCACAGAGGGGAGGCGCG  100
      ||||||||||||||||||||||||||||||||||||||| ||||||||| 
seq2  AGGCGCAGTGGGGAGAGGGGGGGGGAGTAGGGGCACAGA-GGGAGGCGC-  97

seq1  GGGCTGTCTGCTCTTGGTGGTGGAGAGGATTCAAGCTGATCAGAACTGCC  150
      ||||||||||||||| || |||||||||||||||||||||||||||||||
seq2  GGGCTGTCTGCTCTTTGTTGTGGAGAGGATTCAAGCTGATCAGAACTGCC  147

seq1  TGGCACGTTGAGGAAGCTTGATTGAAAATTGCCTATTTTTTTAAAAATTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCACGTTGAGGAAGCTTGATTGAAAATTGCCTATTTTTTTAAAAATTA  197

seq1  CCATGCTTATATTTCTATTATTGTTAAACAGTCCAAACCTATTCATCTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGCTTATATTTCTATTATTGTTAAACAGTCCAAACCTATTCATCTGG  247

seq1  TAAAACTAAAAGTTTTAAGACCCTCCTACTGATTTCTTTTGTTATTGTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACTAAAAGTTTTAAGACCCTCCTACTGATTTCTTTTGTTATTGTAC  297

seq1  TGTTTATCCCACCAGCTACAGCAGTGGTCCATTTGCACACCACATCCTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTATCCCACCAGCTACAGCAGTGGTCCATTTGCACACCACATCCTAG  347

seq1  CCCTTGTACTTGCTGGTTTGTTCCTATCTCTGAGTAGCAGCCGTTTAATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTGTACTTGCTGGTTTGTTCCTATCTCTGAGTAGCAGCCGTTTAATG  397

seq1  GATGCGGACATGCAATGCTCTAAACTTGATACTGTGTATAGTGTTACTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCGGACATGCAATGCTCTAAACTTGATACTGTGTATAGTGTTACTCT  447

seq1  CTTTACATGCATGCTAACCCTGCACAATATTTCCTCAGGTCCATTGTCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACATGCATGCTAACCCTGCACAATATTTCCTCAGGTCCATTGTCTA  497

seq1  TATAACAGTGATTTTTGTCCGTGGTGTTGGCTTATAGGAGTTTTGGATGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACAGTGATTTTTGTCCGTGGTGTTGGCTTATAGGAGTTTTGGATGT  547

seq1  TAAACCTCCTCCCAGGTTCCACAGGCCGCCTCTTCACTGCCCATTATGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCTCCTCCCAGGTTCCACAGGCCGCCTCTTCACTGCCCATTATGAA  597

seq1  CAGGCTCCAAGTTTCACCAGGTGCCTCTTGTCTGCTTCTGTTGTCTGTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTCCAAGTTTCACCAGGTGCCTCTTGTCTGCTTCTGTTGTCTGTCC  647

seq1  AAGAAGAGTAATCAAATCCAGTGGCATAAAGACCTATACTTTCAATTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGAGTAATCAAATCCAGTGGCATAAAGACCTATACTTTCAATTTTT  697

seq1  TTAAAAAAATTTTATAGTTTTCGACTTGGTACTAGGTCTCCAGTCTATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAAATTTTATAGTTTTCGACTTGGTACTAGGTCTCCAGTCTATTT  747

seq1  TTATTTATTTTTATATCCAGTATAAGATAGCAACCCCACACTACCCTTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTATTTTTATATCCAGTATAAGATAGCAACCCCACACTACCCTTCT  797

seq1  GCATGTGGATAGCTTGCTTTTCTGTGCCATTTGATGAAGAGACTGTTGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTGGATAGCTTGCTTTTCTGTGCCATTTGATGAAGAGACTGTTGTT  847

seq1  CCCCATTGAGTGGTCTTGGCACCTCTGTGAATGAGCATGCCTTGATCACG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATTGAGTGGTCTTGGCACCTCTGTGAATGAGCATGCCTTGATCACG  897

seq1  TGTGGGTGGGCCTGGTCAGGGCTGTGGTTTGTCCTGCTGGTCTGTGTGTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGTGGGCCTGGTCAGGGCTGTGGTTTGTCCTGCTGGTCTGTGTGTC  947

seq1  TGTCTTTGTGTCAGTACTGTACCACTTTGGTTATCTTTGCACTCTGGTTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTTGTGTCAGTACTGTACCACTTTGGTTATCTTTGCACTCTGGTTT  997

seq1  GGAATTC  1007
      |||||||
seq2  GGAATTC  1004

seq1: chr12_72848712_72849641
seq2: B6Ng01-112E12.g_68_999

seq1  GAATTCTGAATGGAAATAAAACTTCCCTGCTAACCTGTATGTCACCTTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAATGGAAATAAAACTTCCCTGCTAACCTGTATGTCACCTTGA  50

seq1  AGGCCTGCCAGAGTCCGCCAACCCTGAAGGGTCTACACAGGATTCCCTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCTGCCAGAGTCCGCCAACCCTGAAGGGTCTACACAGGATTCCCTAG  100

seq1  CGTTCAAAGCTGTCAATGTTCTAGGTCCTGGGTCCCATCTGGCTAGCTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTCAAAGCTGTCAATGTTCTAGGTCCTGGGTCCCATCTGGCTAGCTAC  150

seq1  TTTCCAGGGCAGTCCAGTAACGTAAATACAGTCTCAGACTGAGGGACTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAGGGCAGTCCAGTAACGTAAATACAGTCTCAGACTGAGGGACTAT  200

seq1  CAATATGTCAGCTAATACGGTGCCCCGGGAAAGAATCGGGAGCTGGGACG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATGTCAGCTAATACGGTGCCCCGGGAAAGAATCGGGAGCTGGGACG  250

seq1  CTGGGACTGTGGGGCTCAGGTTTGTGTTCTCCTCATGACCTCTCAGCCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGACTGTGGGGCTCAGGTTTGTGTTCTCCTCATGACCTCTCAGCCTG  300

seq1  GCTTTTATCACGATGGCCGCAGCTGTTCACCCCAGCCGAAGTGGGCCACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTATCACGATGGCCGCAGCTGTTCACCCCAGCCGAAGTGGGCCACT  350

seq1  CGCAATGAGATCCACACCTCAGCTGAACTGGGTAGAGCTAGGGAAACAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCAATGAGATCCACACCTCAGCTGAACTGGGTAGAGCTAGGGAAACAAG  400

seq1  AAATCTGTTTGTTTTAACTTATTTTAGTAATGACTCGGAGGCTGTTTCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTGTTTGTTTTAACTTATTTTAGTAATGACTCGGAGGCTGTTTCCT  450

seq1  GTCTCTGGTGATGTTGCCTAGAAACCCTATGATTCTGAGTTGAATCCAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTGGTGATGTTGCCTAGAAACCCTATGATTCTGAGTTGAATCCAAG  500

seq1  TTGCAAATGGAACATTTGGCAAAGCCTGGGGAAACGCTCTTGGAATCCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAAATGGAACATTTGGCAAAGCCTGGGGAAACGCTCTTGGAATCCTG  550

seq1  TTGTCGTGGAGATAACTTTTTAATCCACATTAACTCTGCGTGCGTCTTAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCGTGGAGATAACTTTTTAATCCACATTAACTCTGCGTGCGTCTTAC  600

seq1  ACATATGTGCAACTGCAGAAATATAAGAAACTGTGTCCTTTTGGTTGTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATGTGCAACTGCAGAAATATAAGAAACTGTGTCCTTTTGGTTGTCA  650

seq1  GCTTATGTGTCATATGGGGTGGGGGGAATATTTTCTTCTTTTCCCTAAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTATGTGTCATATGGGGTGGGGGGAATATTTTCTTCTTTTCCCTAAGT  700

seq1  CCCTGCCCCAGAATAAAGCAATGCTTCCATTAAATAGATGATATTGGGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCCCCAGAATAAAGCAATGCTTCCATTAAATAGATGATATTGGGAA  750

seq1  GAAACCCTTTGTCTGTTTTCCCTGCTTTTTTATTCATGGTTCCAAAGAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCCTTTGTCTGTTTTCCCTGCTTTTTTATTCATGGTTCCAAAGAGG  800

seq1  GAGGTTGATCAACGCTAGCAATGGGACCTAG-TTTGTCTT--GGGAAGGG  847
      ||||||||||||||||||| ||||||||||| ||||||||  || |||||
seq2  GAGGTTGATCAACGCTAGC-ATGGGACCTAGTTTTGTCTTTGGGAAAGGG  849

seq1  CTCAGTGTGTCGACAATGAGTGTCATGTGCTCCCTCCTCCTCCTCCTCCT  897
      ||||||||| |||| |||||||||||||||||||||||||||||||||||
seq2  CTCAGTGTGCCGAC-ATGAGTGTCATGTGCTCCCTCCTCCTCCTCCTCCT  898

seq1  CTCTCTCTCTCTCTC-TCTCTCTCTCTCTCTCTC  930
      ||||| ||||||||| | ||||||||||||||||
seq2  CTCTCACTCTCTCTCTTTTCTCTCTCTCTCTCTC  932