BAC Information

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BAC

Clone NameB6Ng01-112O19
Chromosome12 (Build37)
Map Location 93,218,940 - 93,326,923
singlet/doubletdoublet
Overlap geneLOC100039387
Upstream gene4930534B04Rik, 5430427M07Rik, Tshr, Gtf2a1, Ston2, EG666955, LOC100039631, Sel1l, LOC100039367, EG432681, LOC667589
Downstream geneLOC100039425, LOC628116
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-112O19.bB6Ng01-112O19.g
ACCDH918854DH918855
length1,096401
definitionDH918854|Mus musculus domesticus DNA, BAC clone: B6Ng01-112O19, 5' end.DH918855|Mus musculus domesticus DNA, BAC clone: B6Ng01-112O19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(93,325,827 - 93,326,923)(93,218,940 - 93,219,346)
sequence
gaattcctccccagagtttgtgcaacagtttaccatttaaagtgatgtaa
ggaatatgaaggaaccaggatgaagagatggctaagtcagtaaagtattt
gtcactgaagtataaaaagctgatttcaaatttccagaactcatacaaaa
atctgggagtagcagccagcagccagtgcctctaatcctagtgcagtcct
agcagagacaaatggatccctggggtgtgctgatgagcccgtctagctga
atcagcaacctcaaaattcaatgcaagaccttgtctcaaaaataagatag
aacacaagtgagaaacatccctgatgttaacctctgacttccaaatgctc
tcaggcaactcgttcatgcatgtgcacgccaacaggaaaacacgcatgaa
ataaggaaaaggggggggggcaagaaaggcagtgtggagctggagaaagt
actccacattaattgtagaatccaaagtcaacactgtgagccggtagcac
atgttttgacagaattgtagattacagaccataaactcagtttcctcttc
tgtaaagtgaaaaggacgattcatgtctttattatatttctcttctattc
tagtgatcctcattttgccaatgaaaatgttaaaagtgggttgagaagga
aggagagtggagaggtaaacatgctctcagatctattcctaagtccaact
aacttcaagagttttgaactatgttcaaagactagcagcttccctacaag
aacacagttcccgggctactttactcagatataaattttcatgaaaataa
gtctctatccagaagtcatttcctgaagaaaattggaatcaaagcaaaac
aaacagaatagtttctattgtgatatgtgtgtatcaaattttaacaacaa
catgtttttattcagatgaattttcagttattactcaatatttttatggg
aaacataaaatgagtggggatagaaatctttgtctttcaagatccattat
acggaagaaacagggatttaatgttaggacaaggtaaaataaatggattt
ccctgccaatgggattccttgactatgcttagaagccttctgatag
ttggttcagtcaatttacggagaacaaaacgcttgcacaggctcctggct
tacatggctcttccagtttagagtgtgcagactctggcgaggtggacgtt
tctgcaatgattctggtgatttggtcattcagctttccctgcgcatgctc
ccctcaagaattgtaaatttggaagtgctcaaaacgggaatgacagttag
caggaatgcaccaagcggtgacatgcctaaagacgcacatgcatacaccg
ggaacttggcaaagagctgtcagagattaatttattatttactttccacc
atgctttatgaggaaagagctatcattattgagttttgcacttggggagc
taaggcccggagagcgacctaccttccttccttccttccttccttccttc
c
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_93325827_93326923
seq2: B6Ng01-112O19.b_48_1143 (reverse)

seq1  CTATCAGAAGAC-TCTAGACATAGTCAGTGAAT-CCATTTGCATGGAAAT  48
      |||||||||| | ||||  ||||||||  |||| ||||| ||| ||||||
seq2  CTATCAGAAGGCTTCTAAGCATAGTCAAGGAATCCCATTGGCAGGGAAAT  50

seq1  TCATATTATTTTA-CTTGTCCTATACATTATATTCCTGTTTCTTCTGTAT  97
       ||| |||||||| ||||||||| |||||| || ||||||||||| ||||
seq2  CCAT-TTATTTTACCTTGTCCTA-ACATTAAATCCCTGTTTCTTCCGTAT  98

seq1  AATGGAATCTTTGAAGAC-AAGATTTCTAT-CCCACTCAATTTTATGTTT  145
      ||||| |||||  ||||| ||||||||||| ||||||| |||||||||||
seq2  AATGG-ATCTTGAAAGACAAAGATTTCTATCCCCACTC-ATTTTATGTTT  146

seq1  ACCATAAAAATAATTGAGTAATAACTGAAAAATTCATCTGAATAAAAACA  195
       |||||||||| ||||||||||||||| ||||||||||||||||||||||
seq2  CCCATAAAAAT-ATTGAGTAATAACTG-AAAATTCATCTGAATAAAAACA  194

seq1  TGTTGTTGTTAAAATTTGATACACACATATCACAATAGAAACTATTCTGT  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTTGTTAAAATTTGATACACACATATCACAATAGAAACTATTCTGT  244

seq1  TTGTTTTGCTTTGATTCCAATTTTCTTCAGGAAATGACTTCTGGATAGAG  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTGCTTTGATTCCAATTTTCTTCAGGAAATGACTTCTGGATAGAG  294

seq1  ACTTATTTTCATGAAAATTTATATCTGAGTAAAGTAGCCCGGGAACTGTG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATTTTCATGAAAATTTATATCTGAGTAAAGTAGCCCGGGAACTGTG  344

seq1  TTCTTGTAGGGAAGCTGCTAGTCTTTGAACATAGTTCAAAACTCTTGAAG  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGTAGGGAAGCTGCTAGTCTTTGAACATAGTTCAAAACTCTTGAAG  394

seq1  TTAGTTGGACTTAGGAATAGATCTGAGAGCATGTTTACCTCTCCACTCTC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTGGACTTAGGAATAGATCTGAGAGCATGTTTACCTCTCCACTCTC  444

seq1  CTTCCTTCTCAACCCACTTTTAACATTTTCATTGGCAAAATGAGGATCAC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTTCTCAACCCACTTTTAACATTTTCATTGGCAAAATGAGGATCAC  494

seq1  TAGAATAGAAGAGAAATATAATAAAGACATGAATCGTCCTTTTCACTTTA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATAGAAGAGAAATATAATAAAGACATGAATCGTCCTTTTCACTTTA  544

seq1  CAGAAGAGGAAACTGAGTTTATGGTCTGTAATCTACAATTCTGTCAAAAC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGAGGAAACTGAGTTTATGGTCTGTAATCTACAATTCTGTCAAAAC  594

seq1  ATGTGCTACCGGCTCACAGTGTTGACTTTGGATTCTACAATTAATGTGGA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCTACCGGCTCACAGTGTTGACTTTGGATTCTACAATTAATGTGGA  644

seq1  GTACTTTCTCCAGCTCCACACTGCCTTTCTTGCCCCCCCCCCTTTTCCTT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTTTCTCCAGCTCCACACTGCCTTTCTTGCCCCCCCCCCTTTTCCTT  694

seq1  ATTTCATGCGTGTTTTCCTGTTGGCGTGCACATGCATGAACGAGTTGCCT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCATGCGTGTTTTCCTGTTGGCGTGCACATGCATGAACGAGTTGCCT  744

seq1  GAGAGCATTTGGAAGTCAGAGGTTAACATCAGGGATGTTTCTCACTTGTG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGCATTTGGAAGTCAGAGGTTAACATCAGGGATGTTTCTCACTTGTG  794

seq1  TTCTATCTTATTTTTGAGACAAGGTCTTGCATTGAATTTTGAGGTTGCTG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATCTTATTTTTGAGACAAGGTCTTGCATTGAATTTTGAGGTTGCTG  844

seq1  ATTCAGCTAGACGGGCTCATCAGCACACCCCAGGGATCCATTTGTCTCTG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGCTAGACGGGCTCATCAGCACACCCCAGGGATCCATTTGTCTCTG  894

seq1  CTAGGACTGCACTAGGATTAGAGGCACTGGCTGCTGGCTGCTACTCCCAG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGACTGCACTAGGATTAGAGGCACTGGCTGCTGGCTGCTACTCCCAG  944

seq1  ATTTTTGTATGAGTTCTGGAAATTTGAAATCAGCTTTTTATACTTCAGTG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTGTATGAGTTCTGGAAATTTGAAATCAGCTTTTTATACTTCAGTG  994

seq1  ACAAATACTTTACTGACTTAGCCATCTCTTCATCCTGGTTCCTTCATATT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATACTTTACTGACTTAGCCATCTCTTCATCCTGGTTCCTTCATATT  1044

seq1  CCTTACATCACTTTAAATGGTAAACTGTTGCACAAACTCTGGGGAGGAAT  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTACATCACTTTAAATGGTAAACTGTTGCACAAACTCTGGGGAGGAAT  1094

seq1  TC  1097
      ||
seq2  TC  1096

seq1: chr12_93218940_93219346
seq2: B6Ng01-112O19.g_68_474

seq1  GAATTCTTGGTTCAGTCAATTTACGGAGAACAAAACGCTTGCACAGGCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGGTTCAGTCAATTTACGGAGAACAAAACGCTTGCACAGGCTC  50

seq1  CTGGCTTACATGGCTCTTCCAGTTTAGAGTGTGCAGACTCTGGCGAGGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTTACATGGCTCTTCCAGTTTAGAGTGTGCAGACTCTGGCGAGGTG  100

seq1  GACGTTTCTGCAATGATTCTGGTGATTTGGTCATTCAGCTTTCCCTGCGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGTTTCTGCAATGATTCTGGTGATTTGGTCATTCAGCTTTCCCTGCGC  150

seq1  ATGCTCCCCTCAAGAATTGTAAATTTGGAAGTGCTCAAAACGGGAATGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTCCCCTCAAGAATTGTAAATTTGGAAGTGCTCAAAACGGGAATGAC  200

seq1  AGTTAGCAGGAATGCACCAAGCGGTGACATGCCTAAAGACGCACATGCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGCAGGAATGCACCAAGCGGTGACATGCCTAAAGACGCACATGCAT  250

seq1  ACACCGGGAACTTGGCAAAGAGCTGTCAGAGATTAATTTATTATTTACTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCGGGAACTTGGCAAAGAGCTGTCAGAGATTAATTTATTATTTACTT  300

seq1  TCCACCATGCTTTATGAGGAAAGAGCTATCATTATTGAGTTTTGCACTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCATGCTTTATGAGGAAAGAGCTATCATTATTGAGTTTTGCACTTG  350

seq1  GGGAGCTAAGGCCCGGAGAGCGACCTACCTTCCTTCCTTCCTTCCTTCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGCTAAGGCCCGGAGAGCGACCTACCTTCCTTCCTTCCTTCCTTCCT  400

seq1  TCCTTCC  407
      |||||||
seq2  TCCTTCC  407