BAC Information

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BAC

Clone NameB6Ng01-113B04
Chromosome12 (Build37)
Map Location 14,704,145 - 14,846,580
singlet/doubletdoublet
Overlap geneMap1lc3-ps7
Upstream geneLOC238091, EG633789, LOC668481, AW125753, LOC100043256
Downstream geneLOC668492, LOC100042426, LOC217409, Trib2, LOC100043268, EG432636
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-113B04.bB6Ng01-113B04.g
ACCDH918962DH918963
length1,085553
definitionDH918962|Mus musculus domesticus DNA, BAC clone: B6Ng01-113B04, 5' end.DH918963|Mus musculus domesticus DNA, BAC clone: B6Ng01-113B04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(14,704,145 - 14,705,236)(14,846,022 - 14,846,580)
sequence
gaattctcttcatttgtttccattaatatcattagtactatcctgttgtc
ttcacaaaattctcgagtgatattttgggttccctatgcacatgctcatg
agttcatggatgtggacaccagaaaacaatcatggtgtttttcctcaagg
gccatctaccatttgcagtagtgtctcactttggcctacaactcattaaa
gcagagtaagctgggtgaatagcaagctccaaggcttctccaatcactac
catctcaggactagatttacaatatgtatcaacaacccaggtcttcttag
ttgagtgggttctgggaatcaaactcaggtcctcaggcttctaaaacata
tacttccctaactcagttgttgttccagctttcctgaattcattttaaat
tttctaccaccaaaaagctctctgtgactcatgccaatcaggtctcacaa
tttgattacatgttactcttttttgatagctttctttaatttcaattcag
ttattcttactaaagcaaattaccaggataactatttcttttaacccctt
aatgctgaatcacatttgtttttatatagttactccttttaaagtttttt
aattatatattttcttaatttacatttcgaatgttttccctttcctggtt
tcccctccaaaaaccctctatctcatcccacctccccctgctcaccaaca
cactcactccttccctgtcctagcattctcctacactgggacatccagcc
ttcataggaccaagggcctctcctcccattggtgaacgactaggccatcc
tctgttacatatgcaactggagccatgggtccctccatgtgtactctttg
gttggtggtttagtacctggggcttctgagttctggttggttcatattgt
tgttcctcctatggggctacaaaccacttcagctctttggtttttttctc
tcacctctcttttggggaccctgtgctcagtccaattgtgcctgtgagca
tcactcttgtatttgtaagcactggcagagcctctcaaggaggcagctat
attaagccttgtcagcaagcactgtgaatccaata
aacatattggatctttgtggtacttggataagaactgttctatgaatccc
cacaaaagttagcagaagagtacttgtatctttcatttttgaaaatatat
ataaatgcattcaaattaaatgaagtatcacagttgagagatggtttaac
cactactgtctaaagctctcaacccaaaggacagaagatgtaaaatgtca
caatttgtttaatataggaatattggatttttgttaaatagactttactc
ttcaccagaaatactgcatattacgaggagaaattgaatttctacttcaa
aaattaaactggacagcaacgaaaacatttattattattatttttttaaa
tcagtcctatactccatcaacaaatatacatatgaactggatttaagata
gatatggggactgaagagagatggctcaatgttaaaagcactggatgata
catgcaggcaaaacacccatacacataaaataataaaacaataattaaaa
atgctataaatgttagaaatggggaatatttatgtggtgtgtgtgtgttt
gtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_14704145_14705236
seq2: B6Ng01-113B04.b_45_1129

seq1  GAATTCTCTTCATTTGTTTCCATTAATATCATTAGTACTATCCTGTTGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTCATTTGTTTCCATTAATATCATTAGTACTATCCTGTTGTC  50

seq1  TTCACAAAATTCTCGAGTGATATTTTGGGTTCCCTATGCACATGCTCATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAAAATTCTCGAGTGATATTTTGGGTTCCCTATGCACATGCTCATG  100

seq1  AGTTCATGGATGTGGACACCAGAAAACAATCATGGTGTTTTTCCTCAAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCATGGATGTGGACACCAGAAAACAATCATGGTGTTTTTCCTCAAGG  150

seq1  GCCATCTACCATTTGCAGTAGTGTCTCACTTTGGCCTACAACTCATTAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATCTACCATTTGCAGTAGTGTCTCACTTTGGCCTACAACTCATTAAA  200

seq1  GCAGAGTAAGCTGGGTGAATAGCAAGCTCCAAGGCTTCTCCAATCACTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGTAAGCTGGGTGAATAGCAAGCTCCAAGGCTTCTCCAATCACTAC  250

seq1  CATCTCAGGACTAGATTTACAATATGTATCAACAACCCAGGTCTTCTTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCAGGACTAGATTTACAATATGTATCAACAACCCAGGTCTTCTTAG  300

seq1  TTGAGTGGGTTCTGGGAATCAAACTCAGGTCCTCAGGCTTCTAAAACATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTGGGTTCTGGGAATCAAACTCAGGTCCTCAGGCTTCTAAAACATA  350

seq1  TACTTCCCTAACTCAGTTGTTGTTCCAGCTTTCCTGAATTCATTTTAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCCCTAACTCAGTTGTTGTTCCAGCTTTCCTGAATTCATTTTAAAT  400

seq1  TTTCTACCACCAAAAAGCTCTCTGTGACTCATGCCAATCAGGTCTCACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTACCACCAAAAAGCTCTCTGTGACTCATGCCAATCAGGTCTCACAA  450

seq1  TTTGATTACATGTTACTCTTTTTTGATAGCTTTCTTTAATTTCAATTCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATTACATGTTACTCTTTTTTGATAGCTTTCTTTAATTTCAATTCAG  500

seq1  TTATTCTTACTAAAGCAAATTACCAGGATAACTATTTCTTTTAACCCCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCTTACTAAAGCAAATTACCAGGATAACTATTTCTTTTAACCCCTT  550

seq1  AATGCTGAATCACATTTGTTTTTATATAGTTACTCCTTTTAAAGTTTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTGAATCACATTTGTTTTTATATAGTTACTCCTTTTAAAGTTTTTT  600

seq1  AATTATATATTTTCTTAATTTACATTTCGAATGTTTTCCCTTTCCTGGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATATATTTTCTTAATTTACATTTCGAATGTTTTCCCTTTCCTGGTT  650

seq1  TCCCCTCCAAAAACCCTCTATCTCATCCCACCTCCCCCTGCTCACCAACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTCCAAAAACCCTCTATCTCATCCCACCTCCCCCTGCTCACCAACA  700

seq1  CACTCACTCCTTCCCTGTCCTAGCATTCTCCTACACTGGGACATCCAGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCACTCCTTCCCTGTCCTAGCATTCTCCTACACTGGGACATCCAGCC  750

seq1  TTCATAGGACCAAGGGCCTCTCCTCCCATTGGTGAACGACTAGGCCATCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATAGGACCAAGGGCCTCTCCTCCCATTGGTGAACGACTAGGCCATCC  800

seq1  TCTGTTACATATGCAACTGGAGCCATGGGTCCCTCCATGTGTACTCTTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTACATATGCAACTGGAGCCATGGGTCCCTCCATGTGTACTCTTTG  850

seq1  GTTGGTGGTTTAGTACCTGGGGCTTCTGAGGTTCTGGTTGGTTCATATTG  900
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GTTGGTGGTTTAGTACCTGGGGCTTCTGA-GTTCTGGTTGGTTCATATTG  899

seq1  TTGTTCCTCCTATGGGGCTACAAACCACTTCAGCTCCTTTGGTTTTTTTC  950
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TTGTTCCTCCTATGGGGCTACAAACCACTTCAGCT-CTTTGGTTTTTTTC  948

seq1  TCTCACCTCTCTTTTGGGGACCCTGTGCTCAGTCCAATTGTTGCCTGTGA  1000
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TCTCACCTCTCTTTTGGGGACCCTGTGCTCAGTCCAATTG-TGCCTGTGA  997

seq1  GCATCACCTCTGTATTTGTTAGGCACTGGCAGAGCCTCTC-AGGAGGCAG  1049
      |||||||   |||||||| || |||||||||||||||||| |||||||||
seq2  GCATCACTCTTGTATTTG-TAAGCACTGGCAGAGCCTCTCAAGGAGGCAG  1046

seq1  CTATATCAGGCCCCTGTCAGCAAGCACTTGTTGTAATCCAAAA  1092
      |||||| | | || ||||||||||||| |||   ||||||| |
seq2  CTATATTAAG-CCTTGTCAGCAAGCAC-TGT--GAATCCAATA  1085

seq1: chr12_14846022_14846580
seq2: B6Ng01-113B04.g_68_626 (reverse)

seq1  CACAAACACACACACACCACATAAATATTCCCCATTTCTAACATTTATAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAACACACACACACCACATAAATATTCCCCATTTCTAACATTTATAG  50

seq1  CATTTTTAATTATTGTTTTATTATTTTATGTGTATGGGTGTTTTGCCTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTAATTATTGTTTTATTATTTTATGTGTATGGGTGTTTTGCCTGC  100

seq1  ATGTATCATCCAGTGCTTTTAACATTGAGCCATCTCTCTTCAGTCCCCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATCATCCAGTGCTTTTAACATTGAGCCATCTCTCTTCAGTCCCCAT  150

seq1  ATCTATCTTAAATCCAGTTCATATGTATATTTGTTGATGGAGTATAGGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATCTTAAATCCAGTTCATATGTATATTTGTTGATGGAGTATAGGAC  200

seq1  TGATTTAAAAAAATAATAATAATAAATGTTTTCGTTGCTGTCCAGTTTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTAAAAAAATAATAATAATAAATGTTTTCGTTGCTGTCCAGTTTAA  250

seq1  TTTTTGAAGTAGAAATTCAATTTCTCCTCGTAATATGCAGTATTTCTGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGAAGTAGAAATTCAATTTCTCCTCGTAATATGCAGTATTTCTGGT  300

seq1  GAAGAGTAAAGTCTATTTAACAAAAATCCAATATTCCTATATTAAACAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGTAAAGTCTATTTAACAAAAATCCAATATTCCTATATTAAACAAA  350

seq1  TTGTGACATTTTACATCTTCTGTCCTTTGGGTTGAGAGCTTTAGACAGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGACATTTTACATCTTCTGTCCTTTGGGTTGAGAGCTTTAGACAGTA  400

seq1  GTGGTTAAACCATCTCTCAACTGTGATACTTCATTTAATTTGAATGCATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTAAACCATCTCTCAACTGTGATACTTCATTTAATTTGAATGCATT  450

seq1  TATATATATTTTCAAAAATGAAAGATACAAGTACTCTTCTGCTAACTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATATTTTCAAAAATGAAAGATACAAGTACTCTTCTGCTAACTTTT  500

seq1  GTGGGGATTCATAGAACAGTTCTTATCCAAGTACCACAAAGATCCAATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGATTCATAGAACAGTTCTTATCCAAGTACCACAAAGATCCAATAT  550

seq1  GTTGAATTC  559
      |||||||||
seq2  GTTGAATTC  559