MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-113D21
Chromosome	12 (Build37)
Map Location	34,194,782 - 34,195,485
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC100043548, Pbef1, LOC100043553, 4933406C10Rik, Sypl, LOC100043109, 1110049B09Rik, Atxn7l4, Atxn7l1, 4930504H06Rik, Twistnb, LOC668801
Downstream gene	LOC668806, Ferd3l, Twist1, Hdac9
Link	Open Mouse BAC browser

no map image available.

Click to get alignment info.

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name		B6Ng01-113D21.g
ACC		DH919087
length		1,127
definition		DH919087\|Mus musculus domesticus DNA, BAC clone: B6Ng01-113D21, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence		gaattcattactgagtgaacaatggcttgagagaaaggatgctccagtca gaggaacatgtaggtggtcagtggatccatacctctccttcttccccata tctagtcacacagcctcatcccagctctgtggcagaaaacctactgagat ctccatttcctttctgaccccatttccagcacatcacagacatcttctgc tccaaccttgtttccccaactcatcccggtatcttagtctttaatgctag attgtgttcactgggatcacagcagctgagcagggccaagaaaacaggta agttaactgaggattttgacaagttcctcctgccatcaaaaaatccaatc cccaggtctcatacccagcttttcagcagaatacatatggtatccttccc tgaaccccgtctcctgtggattgcaaagatcttccccttctaaccttcct ccaaatgcaccccgagcagtcacaccttgttaatccaagggatgcttcag tccagtcaataagtaggctgattgcagatccaaacctgtttcttctctcc cagatccaaccctcaaaccttatctccagctatgtagtagaaaactttct ggtctctctttcctctgacctcatccccaaaatgtcacaaacatcttctc caactttccttcccataactcatcccagtatcccagcatccaacaacagc aggcattaactgggaatacacaagctgagcgggccaggcaaaacaggcaa gagacagacatcacactctctgaaaatccaaagagaaaagaaaaaccaag gaccaaaacacccaatgaagacaaatcccagaatttagcactcaaaccta taatcaattcatcccagatgtctaggcttcagcataagaacacattcaat aacagccaggacaaatgggtgcttctagttctttttttttttgttttttt tttttttaacaacatatggatgcacagtgggtttcctttgggccattttg tttaaggaggaaggtggttcttttttccttctcagatgtttgaagctagc caagtagtgaccgtgaagaaaattagggtggcaaatttacctggtcctgg gaaacacatctcctttcctggccgggt
quality values		Open. Hide. 61 61 41 49 61 49 17 14 11 12 18 18 23 18 12 22 32 59 59 59 59 61 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 59 49 59 61 61 61 61 59 61 61 61 61 34 52 37 30 30 28 49 41 36 59 59 59 59 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 49 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 50 55 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 47 38 61 61 61 61 47 37 61 61 61 61 61 61 53 61 61 61 61 53 61 61 31 37 61 61 61 53 61 61 61 61 61 61 61 61 47 61 61 61 61 50 61 61 61 61 50 61 61 53 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 52 50 61 61 52 53 42 61 61 61 61 61 61 50 53 61 61 61 61 61 43 61 61 61 50 53 50 61 61 61 53 61 61 53 61 47 47 47 47 57 57 57 57 52 53 57 57 53 57 57 57 34 53 57 53 57 53 57 57 47 53 57 53 53 53 47 31 26 53 53 53 45 53 53 57 47 47 45 57 53 57 52 53 45 47 43 50 47 42 57 50 50 53 42 53 57 57 53 42 36 42 57 45 57 57 53 57 57 43 47 53 53 39 50 35 7 33 41 47 38 50 47 47 47 46 53 52 33 53 45 50 57 37 27 27 52 53 47 47 46 30 53 37 18 52 53 36 53 53 34 14 46 27 32 53 41 38 31 37 50 53 43 27 30 47 38 42 53 38 35 36 34 50 52 38 42 43 30 39 32 53 47 15 57 28 28 37 23 10 36 39 14 18 26 37 52 24 30 52 38 52 22 53 28 42 37 48 40 24 53 36 42 53 47 41 53 37 40 42 42 31 52 53 53 53 40 27 43 28 53 25 27 52 14 44 57 53 31 20 53 53 48 47 37 35 45 12 40 35 57 21 18 30 21 57 57 53 32 20 44 57 25 26 32 23 39 32 32 27 30 20 23 27 11 16 8 12 25 19 44 31 39 29 51 37 30 36 48 25 29 31 34 22 38 30 29 34 16 22 32 11 30 25 47 25 29 35 29 25 37 15 24 48 36 24 17 29 27 36 29 34 33 29 29 31 24 28 39 27 25 26 41 20 30 24 30 12 28 21 21 18 15 15 5 17 25 18 33 29 20 25 29 28 33 26 22 9 7 29 31 10 21 33 33 29 43 51 46 11 29 25 28 30 41 28 16 8 9 5 23 6 6 11 26 6 28 36 38 38 22 19 4 15 36 11 6 20 7 6 23 6 7 30 24 42 11 28 8 8 7 15 15 17 23 5 10 10 9 19 14 24 6 7 16 25 15 10 28 30 13 17 42 7 6 21 19 15 10 8 14 8 5 11 18 27 23 16 6 15 14 34 17 15 23 9 16 8 5 4 7 19 16 8 13 10 10 15 6 13 20 35 44 37 35 17 19 5 6 7 4 4 4 4 14 9 7 14 6 7 10 14 12 9 1 4 5 16 5 9 5 5 5 5 5 8 6 4 14 7 8 5 5 5 16 17 4 7 11 18 18 17 4 3 4 10 26 25 5 4 4 7 23 7 10 24 20 8 4 3 3 5 4 6 3 5 6 5 18 29 9 26 28 18 5 7 5 13 10 6 7 6 5 14 25 18 5 4 4 13 18 4 6 18 20 15 1

Alignment Information

BAC End 1	BAC End 2
	seq1: chr12_34194782_34195485 seq2: B6Ng01-113D21.g_483_1194 seq1 GTGGATTGCAAAGATCTTCCCCTTCTAACCTTCCTCCAAATGCACCCCGA 50 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 GTGGATTGCAAAGATCTTCCCCTTCTAACCTTCCTCCAAATGCACCCCGA 50 seq1 GCAGTCACACCTTGTTAATCCAAGGGATGCTTCAGTCCAGTCAATAAGTA 100 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 GCAGTCACACCTTGTTAATCCAAGGGATGCTTCAGTCCAGTCAATAAGTA 100 seq1 GGCTGATTGCAGATCCAAACCTGTTTCTTCTCTCCCAGATCCAACCCTCA 150 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 GGCTGATTGCAGATCCAAACCTGTTTCTTCTCTCCCAGATCCAACCCTCA 150 seq1 AACCTTATCTCCAGCTATGTAGTAGAAAACTTTCTGGTCTCTCTTTCCTC 200 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 AACCTTATCTCCAGCTATGTAGTAGAAAACTTTCTGGTCTCTCTTTCCTC 200 seq1 TGACCTCATCCCCAAAATGTCACAAACATCTTCTCCAACTTTCCTTCCCA 250 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 TGACCTCATCCCCAAAATGTCACAAACATCTTCTCCAACTTTCCTTCCCA 250 seq1 TAACTCATCCCAGTATCCCAGCATCCAACAACAGCAGGCATTAACTGGGA 300 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 TAACTCATCCCAGTATCCCAGCATCCAACAACAGCAGGCATTAACTGGGA 300 seq1 ATACACAAGCTGAGCGGGCCAGGC-AAACAGGCAAGAGACAGACATCACA 349 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 ATACACAAGCTGAGCGGGCCAGGCAAAACAGGCAAGAGACAGACATCACA 350 seq1 CTCTCTGAAAATCCAAAGAGAAAAGAAAAACCAAGGACCAAAACACCCAA 399 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 CTCTCTGAAAATCCAAAGAGAAAAGAAAAACCAAGGACCAAAACACCCAA 400 seq1 TGAAGACAAAT-CCAGAATTTAGCACTCAAACCTATAATCAATTCAATCC 448 \|\|\|\|\|\|\|\|\|\|\| \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| \|\|\|\| seq2 TGAAGACAAATCCCAGAATTTAGCACTCAAACCTATAATCAATTC-ATCC 449 seq1 CAGATGTCTAGGCTTCAGCATAAGAACACAATCAATAACAGCCAGGACAA 498 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 CAGATGTCTAGGCTTCAGCATAAGAACACATTCAATAACAGCCAGGACAA 499 seq1 ATGGGTGCTTCTAGTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAC 548 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| \|\|\|\|\|\|\|\|\|\|\| \|\|\|\|\|\|\|\|\|\|\|\|\|\| \|\| seq2 ATGGGTGCTTCTAGTTC----TTTTTTTTTTTGTTTTTTTTTTTTTTAAC 545 seq1 AACATAT-GATGCACAGTGGTTTTCCTTT-GGTCATTTTGTTTAAGGAAG 596 \|\|\|\|\|\|\| \|\|\|\|\|\|\|\|\|\|\|\| \|\|\|\|\|\|\|\| \|\| \|\|\|\|\|\|\|\|\|\|\|\|\|\|\| \| seq2 AACATATGGATGCACAGTGGGTTTCCTTTGGGCCATTTTGTTTAAGGAGG 595 seq1 GAGGT-GTTC-TTTTTCCTTCTCAGGATGTATGAAG-TAAGCAAGTAGTG 643 \|\|\|\| \|\|\|\| \|\|\|\|\|\|\|\|\|\|\|\|\| \|\|\|\|\| \|\|\|\|\| \|\| \|\|\|\|\|\|\|\|\| seq2 AAGGTGGTTCTTTTTTCCTTCTCA-GATGTTTGAAGCTAGCCAAGTAGTG 644 seq1 A-CGTGAAGAAGATTAGG--TGCAAATTTACATGG-CCTGGGAAACACAT 689 \| \|\|\|\|\|\|\|\|\| \|\|\|\|\|\| \|\|\|\|\|\|\|\|\|\| \|\|\| \|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 ACCGTGAAGAAAATTAGGGTGGCAAATTTACCTGGTCCTGGGAAACACAT 694 seq1 CTC--TTTCTGG-CGGGT 704 \|\|\| \|\| \|\|\|\| \|\|\|\|\| seq2 CTCCTTTCCTGGCCGGGT 712

BAC End 1

BAC End 2

seq1: chr12_34194782_34195485
seq2: B6Ng01-113D21.g_483_1194

seq1  GTGGATTGCAAAGATCTTCCCCTTCTAACCTTCCTCCAAATGCACCCCGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGATTGCAAAGATCTTCCCCTTCTAACCTTCCTCCAAATGCACCCCGA  50

seq1  GCAGTCACACCTTGTTAATCCAAGGGATGCTTCAGTCCAGTCAATAAGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTCACACCTTGTTAATCCAAGGGATGCTTCAGTCCAGTCAATAAGTA  100

seq1  GGCTGATTGCAGATCCAAACCTGTTTCTTCTCTCCCAGATCCAACCCTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGATTGCAGATCCAAACCTGTTTCTTCTCTCCCAGATCCAACCCTCA  150

seq1  AACCTTATCTCCAGCTATGTAGTAGAAAACTTTCTGGTCTCTCTTTCCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTATCTCCAGCTATGTAGTAGAAAACTTTCTGGTCTCTCTTTCCTC  200

seq1  TGACCTCATCCCCAAAATGTCACAAACATCTTCTCCAACTTTCCTTCCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTCATCCCCAAAATGTCACAAACATCTTCTCCAACTTTCCTTCCCA  250

seq1  TAACTCATCCCAGTATCCCAGCATCCAACAACAGCAGGCATTAACTGGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTCATCCCAGTATCCCAGCATCCAACAACAGCAGGCATTAACTGGGA  300

seq1  ATACACAAGCTGAGCGGGCCAGGC-AAACAGGCAAGAGACAGACATCACA  349
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  ATACACAAGCTGAGCGGGCCAGGCAAAACAGGCAAGAGACAGACATCACA  350

seq1  CTCTCTGAAAATCCAAAGAGAAAAGAAAAACCAAGGACCAAAACACCCAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTGAAAATCCAAAGAGAAAAGAAAAACCAAGGACCAAAACACCCAA  400

seq1  TGAAGACAAAT-CCAGAATTTAGCACTCAAACCTATAATCAATTCAATCC  448
      ||||||||||| ||||||||||||||||||||||||||||||||| ||||
seq2  TGAAGACAAATCCCAGAATTTAGCACTCAAACCTATAATCAATTC-ATCC  449

seq1  CAGATGTCTAGGCTTCAGCATAAGAACACAATCAATAACAGCCAGGACAA  498
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CAGATGTCTAGGCTTCAGCATAAGAACACATTCAATAACAGCCAGGACAA  499

seq1  ATGGGTGCTTCTAGTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAC  548
      |||||||||||||||||    ||||||||||| |||||||||||||| ||
seq2  ATGGGTGCTTCTAGTTC----TTTTTTTTTTTGTTTTTTTTTTTTTTAAC  545

seq1  AACATAT-GATGCACAGTGGTTTTCCTTT-GGTCATTTTGTTTAAGGAAG  596
      ||||||| |||||||||||| |||||||| || ||||||||||||||| |
seq2  AACATATGGATGCACAGTGGGTTTCCTTTGGGCCATTTTGTTTAAGGAGG  595

seq1  GAGGT-GTTC-TTTTTCCTTCTCAGGATGTATGAAG-TAAGCAAGTAGTG  643
       |||| |||| ||||||||||||| ||||| ||||| ||  |||||||||
seq2  AAGGTGGTTCTTTTTTCCTTCTCA-GATGTTTGAAGCTAGCCAAGTAGTG  644

seq1  A-CGTGAAGAAGATTAGG--TGCAAATTTACATGG-CCTGGGAAACACAT  689
      | ||||||||| ||||||   |||||||||| ||| ||||||||||||||
seq2  ACCGTGAAGAAAATTAGGGTGGCAAATTTACCTGGTCCTGGGAAACACAT  694

seq1  CTC--TTTCTGG-CGGGT  704
      |||  || |||| |||||
seq2  CTCCTTTCCTGGCCGGGT  712

BAC Information

Search Parameter

Search Result

BAC

no map image available.

BAC End Information

Alignment Information