BAC Information

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BAC

Clone NameB6Ng01-113F02
Chromosome12 (Build37)
Map Location 64,325,693 - 64,433,252
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC622746, LOC100040438, 1700047L15Rik, Tspyl-ps, EG665741, EG382606
Downstream geneLOC435302
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-113F02.bB6Ng01-113F02.g
ACCDH919144DH919145
length9351,078
definitionDH919144|Mus musculus domesticus DNA, BAC clone: B6Ng01-113F02, 5' end.DH919145|Mus musculus domesticus DNA, BAC clone: B6Ng01-113F02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(64,325,693 - 64,326,436)(64,432,164 - 64,433,252)
sequence
gaattctttgtgtagctctgagccccattttttaatggagttatttgatt
ttctggagtccaccttcttgagttctttatatatattggacattagttcc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggcct
ttttgtcttattgatggtgtcttttgccttacagaagctctgcaatttta
tgaggtcccatgccttacacctatttaacaacattttcttagaatgcaat
ttttaaaaattattttattctacatgtgttatttatttatttatttattt
attaatcttttcttttacactccagattttatccccctcccagtctactc
tctgactgttccacatcccataacacctctctgccccctgtctgtacaag
gatgtccccatcacccaacccccatcctattagacctcaccactccctgg
ggcctcaagtcattagagggttaagtgcatcttctctgactgagccaaaa
acagacagtcccctgctgcatatgtgttgggggcttcatatcagctggtg
tatggggcctggttggtgatccagtatctgagagatctcaggggtccagg
ttacttgagattgctggtcctcctacaatgccaccctcctcctcggcttc
atccagctttttctaattcagccacaggggtcactagcttctatctattg
gttgggtgcaaatatttgcatctgactctttcagctacttgttgggtctt
ttatgggacagtcacgataggctcctctttttctgagtaccacatagcct
cagtaaccgtctcatgccttgcaacctccgctttaattccattttgggcc
tgtggctggacctgcttttcttcaggatcctctccatttccatcccttca
gttcttttagacaggaacaaataccaggtcagaaa
gaattctttgggtgtgtagacagaaattgttaataatttaagaagaaatg
gaatctctgagtgaatagccaatgccatgttgaggattccaatacctcag
cctcgcagagaggcaaagccttacctaggtaagactcaaaagggtggcaa
atctcttcttgagagtctaagcatttgtgtttatgaaagactgaatagtg
tgtacaaaaactggttactacagaacctaccccctcagatctttatagta
tgcaactgctcccctacagagtcctcctacttggctggatatgctataga
aaataaagacgctaaggttccagattgctagtattactagataccacaca
acaatattcatacttttccaccaatcctagctttcctgtacttccatctt
tgttcctgctttttctttattccttcaccacccctagttaggttccacaa
tgccagctgagtgagacataggtaaataacaaacaaataaaaatgtatag
agtgaaaaggaaggaaaaggcaccagactcttgatgtagacacttgtttt
tctgatgctgctttaatttcttttttttgtagctgtataaaataaataat
tgaaaaatgtatatatttacaactatgtaattattaaattaatacagggt
ttttaagtgtaaaaaatgtctcaagagcttcataaacaaaaacatcacaa
agtcatgtgtacaacacttttgtatagatgggtaaaaacctactttatta
ataatgactgatcaaaactcttcagaaatttcaagtcagagtatatttta
taactgacatactaaagctcataatcaaaatgagaaaattagaggttttt
tggcaagtaaagacatttatggagttcaattttctgagatataggaagag
aaaaattagaaactaattgtactgctgcacattttaattgcatgttagag
actaacagaaaggcagaggtagcaaataaattggatatttatttagacag
taggaggcacccttaatattaataggatgagactatatagtacttcttta
tctattataatagcataatataattgat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_64325693_64326436
seq2: B6Ng01-113F02.b_48_791

seq1  GAATTCTTTGTGTAGCTCTGAGCCCCATTTTTTAATGGAGTTATTTGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTGTAGCTCTGAGCCCCATTTTTTAATGGAGTTATTTGATT  50

seq1  TTCTGGAGTCCACCTTCTTGAGTTCTTTATATATATTGGACATTAGTTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGAGTCCACCTTCTTGAGTTCTTTATATATATTGGACATTAGTTCC  100

seq1  CTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGCCT  150

seq1  TTTTGTCTTATTGATGGTGTCTTTTGCCTTACAGAAGCTCTGCAATTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTCTTATTGATGGTGTCTTTTGCCTTACAGAAGCTCTGCAATTTTA  200

seq1  TGAGGTCCCATGCCTTACACCTATTTAACAACATTTTCTTAGAATGCAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTCCCATGCCTTACACCTATTTAACAACATTTTCTTAGAATGCAAT  250

seq1  TTTTAAAAATTATTTTATTCTACATGTGTTATTTATTTATTTATTTATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAAATTATTTTATTCTACATGTGTTATTTATTTATTTATTTATTT  300

seq1  ATTAATCTTTTCTTTTACACTCCAGATTTTATCCCCCTCCCAGTCTACTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATCTTTTCTTTTACACTCCAGATTTTATCCCCCTCCCAGTCTACTC  350

seq1  TCTGACTGTTCCACATCCCATAACACCTCTCTGCCCCCTGTCTGTACAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACTGTTCCACATCCCATAACACCTCTCTGCCCCCTGTCTGTACAAG  400

seq1  GATGTCCCCATCACCCAACCCCCATCCTATTAGACCTCACCACTCCCTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTCCCCATCACCCAACCCCCATCCTATTAGACCTCACCACTCCCTGG  450

seq1  GGCCTCAAGTCATTAGAGGGTTAAGTGCATCTTCTCTGACTGAGCCAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTCAAGTCATTAGAGGGTTAAGTGCATCTTCTCTGACTGAGCCAAAA  500

seq1  ACAGACAGTCCCCTGCTGCATATGTGTTGGGGGCTTCATATCAGCTGGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACAGTCCCCTGCTGCATATGTGTTGGGGGCTTCATATCAGCTGGTG  550

seq1  TATGGGGCCTGGTTGGTGATCCAGTATCTGAGAGATCTCAGGGGTCCAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGGGCCTGGTTGGTGATCCAGTATCTGAGAGATCTCAGGGGTCCAGG  600

seq1  TTACTTGAGATTGCTGGTCCTCCTACAATGCCACCCTCCTCCTCGGCTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTGAGATTGCTGGTCCTCCTACAATGCCACCCTCCTCCTCGGCTTC  650

seq1  ATCCAGCTTTTTCTAATTCAGCCACAGGGGTCACTAGCTTCTATCTATTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGCTTTTTCTAATTCAGCCACAGGGGTCACTAGCTTCTATCTATTG  700

seq1  GTTGGGTGCAAATATTTGCATCTGACTCTTTCAGCTACTTGTTG  744
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGGTGCAAATATTTGCATCTGACTCTTTCAGCTACTTGTTG  744

seq1: chr12_64432164_64433252
seq2: B6Ng01-113F02.g_69_1146 (reverse)

seq1  ATCAATTTATATTAATGCTATTTTATTATTTAGATAAGAAGTACTATATA  50
      ||||| ||||||| |||||||| || ||  ||   |||||||||||||||
seq2  ATCAA-TTATATT-ATGCTATTATAATAGATA---AAGAAGTACTATATA  45

seq1  GTCTTCATTCTATT-ATATTTAGGGTGCCTTCTACTGTCTAAATAAATAT  99
      ||| |||| ||||| ||||| ||||||||| |||||||||||||||||||
seq2  GTC-TCATCCTATTAATATTAAGGGTGCCTCCTACTGTCTAAATAAATAT  94

seq1  TCATATTTTATTTGCTACCTCTTGCCTTTCTGTTAGTCTTCTAACATGCA  149
       |  | ||||||||||||||| |||||||||||||||| |||||||||||
seq2  CC--AATTTATTTGCTACCTC-TGCCTTTCTGTTAGTC-TCTAACATGCA  140

seq1  ATTAAAATGTGGCAGCAGTACAATTAGTTTCTAATTTTTCTCTTCCTATA  199
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAATGT-GCAGCAGTACAATTAGTTTCTAATTTTTCTCTTCCTATA  189

seq1  TCTCAGAAAATTGAACTCCATAAATGTCTTTACTTGCCAAAAAACCTCTA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGAAAATTGAACTCCATAAATGTCTTTACTTGCCAAAAAACCTCTA  239

seq1  ATTTTCTCATTTTGATTATGAGCTTTTAGTATGTCAGTTATAAAATATAC  299
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  ATTTTCTCATTTTGATTATGAGC-TTTAGTATGTCAGTTATAAAATATAC  288

seq1  TCTGACTTGAAATTTCTGAAGAGTTTTGATCAGTCATTATTAATAAAGTA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACTTGAAATTTCTGAAGAGTTTTGATCAGTCATTATTAATAAAGTA  338

seq1  GGTTTTTACCCATCTATACAAAAGTGTTGTACACATGACTTTGTGATGTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTTACCCATCTATACAAAAGTGTTGTACACATGACTTTGTGATGTT  388

seq1  TTTGTTTATGAAGCTCTTGAGACATTTTTTACACTTAAAAACCCTGTATT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTATGAAGCTCTTGAGACATTTTTTACACTTAAAAACCCTGTATT  438

seq1  AATTTAATAATTACATAGTTGTAAATATATACATTTTTCAATTATTTATT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAATAATTACATAGTTGTAAATATATACATTTTTCAATTATTTATT  488

seq1  TTATACAGCTACAAAAAAAAGAAATTAAAGCAGCATCAGAAAAACAAGTG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATACAGCTACAAAAAAAAGAAATTAAAGCAGCATCAGAAAAACAAGTG  538

seq1  TCTACATCAAGAGTCTGGTGCCTTTTCCTTCCTTTTCACTCTATACATTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACATCAAGAGTCTGGTGCCTTTTCCTTCCTTTTCACTCTATACATTT  588

seq1  TTATTTGTTTGTTATTTACCTATGTCTCACTCAGCTGGCATTGTGGAACC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTGTTTGTTATTTACCTATGTCTCACTCAGCTGGCATTGTGGAACC  638

seq1  TAACTAGGGGTGGTGAAGGAATAAAGAAAAAGCAGGAACAAAGATGGAAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTAGGGGTGGTGAAGGAATAAAGAAAAAGCAGGAACAAAGATGGAAG  688

seq1  TACAGGAAAGCTAGGATTGGTGGAAAAGTATGAATATTGTTGTGTGGTAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGAAAGCTAGGATTGGTGGAAAAGTATGAATATTGTTGTGTGGTAT  738

seq1  CTAGTAATACTAGCAATCTGGAACCTTAGCGTCTTTATTTTCTATAGCAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTAATACTAGCAATCTGGAACCTTAGCGTCTTTATTTTCTATAGCAT  788

seq1  ATCCAGCCAAGTAGGAGGACTCTGTAGGGGAGCAGTTGCATACTATAAAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGCCAAGTAGGAGGACTCTGTAGGGGAGCAGTTGCATACTATAAAG  838

seq1  ATCTGAGGGGGTAGGTTCTGTAGTAACCAGTTTTTGTACACACTATTCAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGAGGGGGTAGGTTCTGTAGTAACCAGTTTTTGTACACACTATTCAG  888

seq1  TCTTTCATAAACACAAATGCTTAGACTCTCAAGAAGAGATTTGCCACCCT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCATAAACACAAATGCTTAGACTCTCAAGAAGAGATTTGCCACCCT  938

seq1  TTTGAGTCTTACCTAGGTAAGGCTTTGCCTCTCTGCGAGGCTGAGGTATT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGTCTTACCTAGGTAAGGCTTTGCCTCTCTGCGAGGCTGAGGTATT  988

seq1  GGAATCCTCAACATGGCATTGGCTATTCACTCAGAGATTCCATTTCTTCT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATCCTCAACATGGCATTGGCTATTCACTCAGAGATTCCATTTCTTCT  1038

seq1  TAAATTATTAACAATTTCTGTCTACACACCCAAAGAATTC  1089
      ||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTATTAACAATTTCTGTCTACACACCCAAAGAATTC  1078