BAC Information

Click to search

BAC

Clone NameB6Ng01-113J04
Chromosome12 (Build37)
Map Location 94,963,049 - 95,098,518
singlet/doubletdoublet
Overlap genenone
Upstream genenone
Downstream gene2610022K04Rik-ps, EG633639
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-113J04.bB6Ng01-113J04.g
ACCDH919334DH919335
length1,1611,104
definitionDH919334|Mus musculus domesticus DNA, BAC clone: B6Ng01-113J04, 5' end.DH919335|Mus musculus domesticus DNA, BAC clone: B6Ng01-113J04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(94,963,049 - 94,964,221)(95,097,404 - 95,098,518)
sequence
gaattcttttgattaaattatatcttgtctacataagttgttagcatgta
gtccaggctagccccaaagttataattatcttgcagcctcagacctgaaa
gtgttggcatgaaaatcatgaactagccctttagcctttgtttcattgta
agctcctttcattttctagagtttaacactctaaacttgtacatgatttt
gcctcagaaactctcagtcatatttattgctcttgttttatttttttgaa
tttttgaatttagtcatataaatgttaaaaaaaagtaccctttatatcat
cctgtatatcatcattccgagatctgggattactgatacatgcccctgtg
ttgggattattaacattcatcttagggattgattcttatgcttgtgtggc
aagcacttttctactgagctatcttctcaaccctgttatttctttaatta
aatcttgtggagaactaaatgtgtgccataattattctaagtgtagagct
gtaacactttttaacatgtgtacattgaatagtttataaagattttaaaa
gtaacatcaacagaaatacatttatatgcactaagtagtaaattattggt
gaataggatatgaggacaattgtagtctgggtggaattgtgttacatgat
aacaactttagggacttaacaattacaattttgtaaatcaattctgtttg
acattaggtgacttatttatacaagtgataataattgtagcaaactaact
gattagttcaagccattttaataaaaggtgcatagagttgtttttgaaat
atttgcttgataagagattctattgcatgtatctgtatattacaccatat
tctaggcagtacagttcacataaaacagtgaagacaaaattcattgtgat
aatgttgcaatcaactcctagatgaaaaacaatgagactataaatacttg
atccagagtactttgtgtgagagtcctgagtctaaataataaactgagtc
taaataaataaactgtgactgaggtgccaggctatccatctaggcataat
atctgtcatcttctgcctataaattttctgataattcattattcttcttt
caaacttcgatccattttctgcttttttctggtacacaaacatgcaatca
tccaaatgcaa
gaattcactcggacaaccagattcttctaaggcaaagctttattgcttca
tctgaaggaagacccgggacaaggaaaatggtgctgcttatatacccctc
cgtgtgacatgtcagctcctgattagctgctcactcatcaccccactact
acgccccgggatgggcagttacttggcacgaatttactcttgcaccagcg
cacattacttgtttaccagttaggcccagtggaggctcatgatggcgatt
gctcacagctctccacataccactgtgtagcagacattgttgaagcttaa
atccatcttgagatgcatagacaatgatgcttgctgacaaccctgatgac
ctgagttggatcctccaggagatttagatcctttcagttattctgtgacg
atcatcaccctcaggtgtcatatggatccttttcctccatatacataaaa
cctattgatgtttgtttctggaacatttcagtctggtaattttctctagg
tggagtcatatcatctttataaaaactagtgtttattttatgttgacaat
aatgtaaagccacattttagttgacattcttacacaaacatcagcacaca
actcccccccccacacacacacatcattgtaaggtaagccacagtgacac
atttcctctagcaaggctacacctacttccacaaggccacacttcctgat
aatactcttccctgggccaatcatattcaaaccacagcaatttggattta
tgaaaaatacttcaaaaaaatattatgactaatactgccaggccataaaa
tatcgagaacagaattaactgagtgaatattttgattataaatgacttta
acatgtttttagagctagtctcatgaatgtatagaaaccaagagcagtgg
aggtataattatttatctgttctcaaataatgataggcctgtgacttagg
agattcagttactatgcttcctaggccttcagagttatataaactactag
taaaagaaatttactgtaagactcaatcccagacttatcatgaagtgaac
aacaaagtcaacattgctcttcactcatgaacacaattttttatcagagg
ttca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_94963049_94964221
seq2: B6Ng01-113J04.b_46_1206

seq1  GAATTCTTTTGATTAAATTATATCTTGTCTACATAAGTTGTTAGCATGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTGATTAAATTATATCTTGTCTACATAAGTTGTTAGCATGTA  50

seq1  GTCCAGGCTAGCCCCAAAGTTATAATTATCTTGCAGCCTCAGACCTGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAGGCTAGCCCCAAAGTTATAATTATCTTGCAGCCTCAGACCTGAAA  100

seq1  GTGTTGGCATGAAAATCATGAACTAGCCCTTTAGCCTTTGTTTCATTGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTGGCATGAAAATCATGAACTAGCCCTTTAGCCTTTGTTTCATTGTA  150

seq1  AGCTCCTTTCATTTTCTAGAGTTTAACACTCTAAACTTGTACATGATTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCCTTTCATTTTCTAGAGTTTAACACTCTAAACTTGTACATGATTTT  200

seq1  GCCTCAGAAACTCTCAGTCATATTTATTGCTCTTGTTTTATTTTTTTGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCAGAAACTCTCAGTCATATTTATTGCTCTTGTTTTATTTTTTTGAA  250

seq1  TTTTTGAATTTAGTCATATAAATGTTAAAAAAAAGTACCCTTTATATCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGAATTTAGTCATATAAATGTTAAAAAAAAGTACCCTTTATATCAT  300

seq1  CCTGTATATCATCATTCCGAGATCTGGGATTACTGATACATGCCCCTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTATATCATCATTCCGAGATCTGGGATTACTGATACATGCCCCTGTG  350

seq1  TTGGGATTATTAACATTCATCTTAGGGATTGATTCTTATGCTTGTGTGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGATTATTAACATTCATCTTAGGGATTGATTCTTATGCTTGTGTGGC  400

seq1  AAGCACTTTTCTACTGAGCTATCTTCTCAACCCTGTTATTTCTTTAATTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACTTTTCTACTGAGCTATCTTCTCAACCCTGTTATTTCTTTAATTA  450

seq1  AATCTTGTGGAGAACTAAATGTGTGCCATAATTATTCTAAGTGTAGAGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTGTGGAGAACTAAATGTGTGCCATAATTATTCTAAGTGTAGAGCT  500

seq1  GTAACACTTTTTAACATGTGTACATTGAATAGTTTATAAAGATTTTAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACACTTTTTAACATGTGTACATTGAATAGTTTATAAAGATTTTAAAA  550

seq1  GTAACATCAACAGAAATACATTTATATGCACTAAGTAGTAAATTATTGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACATCAACAGAAATACATTTATATGCACTAAGTAGTAAATTATTGGT  600

seq1  GAATAGGATATGAGGACAATTGTAGTCTGGGTGGAATTGTGTTACATGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGGATATGAGGACAATTGTAGTCTGGGTGGAATTGTGTTACATGAT  650

seq1  AACAACTTTAGGGACTTAACAATTACAATTTTGTAAATCAATTCTGTTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACTTTAGGGACTTAACAATTACAATTTTGTAAATCAATTCTGTTTG  700

seq1  ACATTAGGTGACTTATTTATACAAGTGATAATAATTGTAGCAAACTAACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTAGGTGACTTATTTATACAAGTGATAATAATTGTAGCAAACTAACT  750

seq1  GATTAGTTCAAGCCATTTTAATAAAAGGTGCATAGAGTTGTTTTTGAAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAGTTCAAGCCATTTTAATAAAAGGTGCATAGAGTTGTTTTTGAAAT  800

seq1  ATTTGCTTGATAAGAGATTCTATTGCATGTATCTGTATATTACACCATAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCTTGATAAGAGATTCTATTGCATGTATCTGTATATTACACCATAT  850

seq1  TCTAGGCAGTACAGTTCACATAAAACAGTGAAGACAAAATTCATTGTGAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGCAGTACAGTTCACATAAAACAGTGAAGACAAAATTCATTGTGAT  900

seq1  AATGTTGCAATCAACTCCTAGATGAAAAACAATGAGACTATAAATACTTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTGCAATCAACTCCTAGATGAAAAACAATGAGACTATAAATACTTG  950

seq1  ATCCAGAGTACTATGTGTGAGAGTCCTGAGTCTAAATAATAAACTGAGTC  1000
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  ATCCAGAGTACTTTGTGTGAGAGTCCTGAGTCTAAATAATAAACTGAGTC  1000

seq1  TAAATAAATAAACTGTGACTGAGGTGCCAGGCTATCCATCTAGGCAATAA  1050
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TAAATAAATAAACTGTGACTGAGGTGCCAGGCTATCCATCTAGGC-ATAA  1049

seq1  TATCTGTCATCTTCTGCCTATAAATTTTCTGATAATTTCATTTATTTCTT  1100
      ||||||||||||||||||||||||||||||||||| ||||||   |||||
seq2  TATCTGTCATCTTCTGCCTATAAATTTTCTGATAA-TTCATT--ATTCTT  1096

seq1  CTTCAAACCTTCGTTTCATTTTTCTGCTTTTTTTTTCTTGGTACACAGAC  1150
      |||  || ||||| | || ||||||||||||||     ||||||||| ||
seq2  CTTTCAAACTTCGATCCA-TTTTCTGCTTTTTT----CTGGTACACAAAC  1141

seq1  ATGCATACAATCA-CAAAATGCAA  1173
      |||    |||||| | ||||||||
seq2  ATG----CAATCATCCAAATGCAA  1161

seq1: chr12_95097404_95098518
seq2: B6Ng01-113J04.g_70_1173 (reverse)

seq1  TGAACCTCTGAT-AAAAATTGTGTTCATGAGTG-AGAGCACATGTTGACT  48
      |||||||||||| |||||||||||||||||||| |||||| |||||||||
seq2  TGAACCTCTGATAAAAAATTGTGTTCATGAGTGAAGAGCA-ATGTTGACT  49

seq1  TTGTGTGTCACCTTCAATGATAAGTCTGGGATATGAGTCTTTACAGTAAA  98
      |||| |||   |||| |||||||||||||||| |||||| ||||||| ||
seq2  TTGT-TGTTCACTTC-ATGATAAGTCTGGGAT-TGAGTC-TTACAGT-AA  94

seq1  ATTTCTTTTTTACTAGGTTAGTTTTATATAACTCTGAAGGCCTAGGAAGC  148
      |||||  |||||||||  ||| ||||||||||||||||||||||||||||
seq2  ATTTC--TTTTACTAG--TAG-TTTATATAACTCTGAAGGCCTAGGAAGC  139

seq1  ATAGTAACTGAATCTCCTAAGTCACAGGCCTATCATTATTTGGAGAACAG  198
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  ATAGTAACTGAATCTCCTAAGTCACAGGCCTATCATTATTT-GAGAACAG  188

seq1  ATAAATAATTATACCTTCACTGCTCTTGGTTTCTATACATTCATGAGACT  248
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  ATAAATAATTATACCTCCACTGCTCTTGGTTTCTATACATTCATGAGACT  238

seq1  AGCTCTAAAAACATGTTAAAGTCATTTATAATCAAAATATTCACTCAGTT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTAAAAACATGTTAAAGTCATTTATAATCAAAATATTCACTCAGTT  288

seq1  AATTCTGTTCTCGATATTTTAATGGCCTGGCAGTATTAGTCATAATATTT  348
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AATTCTGTTCTCGATATTTT-ATGGCCTGGCAGTATTAGTCATAATATTT  337

seq1  TTTTGAAGTATTTTTCATAAATCCAAATTGCTGTGGTTTGAATATGATTG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAAGTATTTTTCATAAATCCAAATTGCTGTGGTTTGAATATGATTG  387

seq1  GCCCAGGGAAGAGTATTATCAGGAAGTGTGGCCTTGTGGAAGTAGGTGTA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAGGGAAGAGTATTATCAGGAAGTGTGGCCTTGTGGAAGTAGGTGTA  437

seq1  GCCTTGCTAGAGGAAATGTGTCACTGTGGCTTACCTTACAATGATGTGTG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGCTAGAGGAAATGTGTCACTGTGGCTTACCTTACAATGATGTGTG  487

seq1  TGTGTGGGGGGGGGAGTTGTGTGCTGATGTTTGTGTAAGAATGTCAACTA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGGGGGGGGGAGTTGTGTGCTGATGTTTGTGTAAGAATGTCAACTA  537

seq1  AAATGTGGCTTTACATTATTGTCAACATAAAATAAACACTAGTTTTTATA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTGGCTTTACATTATTGTCAACATAAAATAAACACTAGTTTTTATA  587

seq1  AAGATGATATGACTCCACCTAGAGAAAATTACCAGACTGAAATGTTCCAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGATATGACTCCACCTAGAGAAAATTACCAGACTGAAATGTTCCAG  637

seq1  AAACAAACATCAATAGGTTTTATGTATATGGAGGAAAAGGATCCATATGA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAACATCAATAGGTTTTATGTATATGGAGGAAAAGGATCCATATGA  687

seq1  CACCTGAGGGTGATGATCGTCACAGAATAACTGAAAGGATCTAAATCTCC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTGAGGGTGATGATCGTCACAGAATAACTGAAAGGATCTAAATCTCC  737

seq1  TGGAGGATCCAACTCAGGTCATCAGGGTTGTCAGCAAGCATCATTGTCTA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGATCCAACTCAGGTCATCAGGGTTGTCAGCAAGCATCATTGTCTA  787

seq1  TGCATCTCAAGATGGATTTAAGCTTCAACAATGTCTGCTACACAGTGGTA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCTCAAGATGGATTTAAGCTTCAACAATGTCTGCTACACAGTGGTA  837

seq1  TGTGGAGAGCTGTGAGCAATCGCCATCATGAGCCTCCACTGGGCCTAACT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGAGAGCTGTGAGCAATCGCCATCATGAGCCTCCACTGGGCCTAACT  887

seq1  GGTAAACAAGTAATGTGCGCTGGTGCAAGAGTAAATTCGTGCCAAGTAAC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAACAAGTAATGTGCGCTGGTGCAAGAGTAAATTCGTGCCAAGTAAC  937

seq1  TGCCCATCCCGGGGCGTAGTAGTGGGGTGATGAGTGAGCAGCTAATCAGG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCATCCCGGGGCGTAGTAGTGGGGTGATGAGTGAGCAGCTAATCAGG  987

seq1  AGCTGACATGTCACACGGAGGGGTATATAAGCAGCACCATTTTCCTTGTC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGACATGTCACACGGAGGGGTATATAAGCAGCACCATTTTCCTTGTC  1037

seq1  CCGGGTCTTCCTTCAGATGAAGCAATAAAGCTTTGCCTTAGAAGAATCTG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGGTCTTCCTTCAGATGAAGCAATAAAGCTTTGCCTTAGAAGAATCTG  1087

seq1  GTTGTCCGAGTGAATTC  1115
      |||||||||||||||||
seq2  GTTGTCCGAGTGAATTC  1104