BAC Information

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BAC

Clone NameB6Ng01-114M12
Chromosome12 (Build37)
Map Location 93,820,608 - 93,821,721
singlet/doubletsinglet
Overlap genenone
Upstream geneGtf2a1, Ston2, EG666955, LOC100039631, Sel1l, LOC100039367, EG432681, LOC667589, LOC100039387, LOC100039425, LOC628116
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-114M12.bB6Ng01-114M12.g
ACCDH920214DH920215
length1,1821,111
definitionDH920214|Mus musculus domesticus DNA, BAC clone: B6Ng01-114M12, 5' end.DH920215|Mus musculus domesticus DNA, BAC clone: B6Ng01-114M12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaatacagaatggcagagaagcacctgaaaaaaat
gttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgaga
ttccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacag
cagatgctggcatggatgtggagaaagaggaacactcctccattgttggt
gggagtgcaggcttgtacaaccactctggaaatcagtctggcagttcctc
agaaaactggacatagtactaccggaggatccagcaatacctctcctggg
catatatccagaagatgccccaactggtaagaaggacacatgctccacta
tgttcatagcagccttatttataatagccagaagctggaaagaacctaga
tgcccctcaacagaggaatggatacagaaaatgtggtacatctacacaat
ggagtactactcagctattaaaaagaatgaatttatgaaattcctagcca
aatggatggacctggagggcatcatcctgagtgaggtaacacattcacaa
agaaactcacacaatatgtactcactgataagtggatattagccccaaac
ctaggatacccaagatataagatataatttgctaaacacatgaaactcaa
gaagaatgaagactgaagtgtggacactatgcccctccttagatttggga
acaaaacacccatggaaagagttacagagacaaagtttggagctgagatg
aaaggatgtaccatgtagagactgccatatccagggatccaccccataat
cagcatccaaacgctgacaccattgcatacactagcaagattttattgaa
aggacccagatgtagctgtctcttgtgagactatgctggggcctagcaaa
cacagaagtggatgctcacagtcagctaatggatgtatcatagggctccc
aatggaggagctagagaaagtagccaggagctaaagggatctgcaaccct
tataggtggaacaacattatgaactaaccagtaccccggagctcttgact
ctagctgcataatatatcaaaagatggcctagtcggcatcattgtaaaga
gaggtcattgactgcaaacttatatgcctcattcaggcgaactcaggcca
aaagtggaatgggtggcaggggagattggtgt
gaattcttttacccattgcaggccatagaaaatggtatgccctctctaga
aaattcacttgcatgattagcctttcctagatggttcctaatagggctgg
acctaggcccccagcacatatgtaacagacgtgcagctcaggctttatgt
ggttacgccaacaactggagtggcagttattcctaaagctgatgcctgtc
tatggaatgcattcccctcaatggtctgccttatcaggcttcattgggaa
aggatgtgtctagctctgcagagacttgatatcctagggtcgggggacac
acatggggggcctccacccacttagaagagaggaggagaggaatggaaga
agggaattgtattcaggggattggaacagtggggcatctatcaagaagta
aactgaattaaaaagaaataatgaccatcaacatacacacatatttactt
gtactgtgtataatttcgatatcacaattattgtacattaagaataatat
gtcaggaaataaatagaaaaattaggctataagaaggagaaaactatact
ggttaaacatgtggaggctggtgacagacacataactccaaactacaggt
ggcttctgagctacacgacttcagcatgtttcttaaaatgatgctcttgt
tatcaatttcttcctatgattaaaatgaggatgataatattttcctttgg
aactgtcatcagggtaatacaaagattaagtataaaagtcctgtagctca
cctggcatataataaagtcaataatgttcacttactgttaattgtatctt
tatcaccatcattgacataagaataattataataaattatcagacaaaaa
tttactaatcttaatgtcagtgtgggaagctgctgggtaaataagagtgg
agtctctcactggaagttagaaataatttcaagatcatgaaaagaagtta
tattcatttacataggaaaaggacataggaacagttcaagttatctcata
ctatttattgccactgttaaaaacatcagaggattctacttattatttga
cttgtcttgttctagaataagttcataaatccatgtaatccaatatttca
tgtttaaataa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_93820608_93821721
seq2: B6Ng01-114M12.g_68_1178

seq1  GAATTCTTTTACCCATTGCAGGCCATAGAAAATGGTATGCCCTCTCTAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTACCCATTGCAGGCCATAGAAAATGGTATGCCCTCTCTAGA  50

seq1  AAATTCACTTGCATGATTAGCCTTTCCTAGATGGTTCCTAATAGGGCTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCACTTGCATGATTAGCCTTTCCTAGATGGTTCCTAATAGGGCTGG  100

seq1  ACCTAGGCCCCCAGCACATATGTAACAGACGTGCAGCTCAGGCTTTATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAGGCCCCCAGCACATATGTAACAGACGTGCAGCTCAGGCTTTATGT  150

seq1  GGTTACGCCAACAACTGGAGTGGCAGTTATTCCTAAAGCTGATGCCTGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTACGCCAACAACTGGAGTGGCAGTTATTCCTAAAGCTGATGCCTGTC  200

seq1  TATGGAATGCATTCCCCTCAATGGTCTGCCTTATCAGGCTTCATTGGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGAATGCATTCCCCTCAATGGTCTGCCTTATCAGGCTTCATTGGGAA  250

seq1  AGGATGTGTCTAGCTCTGCAGAGACTTGATATCCTAGGGTCGGGGGACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGTGTCTAGCTCTGCAGAGACTTGATATCCTAGGGTCGGGGGACAC  300

seq1  ACATGGGGGGCCTCCACCCACTTAGAAGAGAGGAGGAGAGGAATGGAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGGGGGCCTCCACCCACTTAGAAGAGAGGAGGAGAGGAATGGAAGA  350

seq1  AGGGAATTGTATTCAGGGGATTGGAACAGTGGGGCATCTATCAAGAAGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAATTGTATTCAGGGGATTGGAACAGTGGGGCATCTATCAAGAAGTA  400

seq1  AACTGAATTAAAAAGAAATAATGACCATCAACATACACACATATTTACTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAATTAAAAAGAAATAATGACCATCAACATACACACATATTTACTT  450

seq1  GTACTGTGTATAATTTCGATATCACAATTATTGTACATTAAGAATAATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTGTGTATAATTTCGATATCACAATTATTGTACATTAAGAATAATAT  500

seq1  GTCAGGAAATAAATAGAAAAATTAGGCTATAAGAAGGAGAAAACTATACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGGAAATAAATAGAAAAATTAGGCTATAAGAAGGAGAAAACTATACT  550

seq1  GGTTAAACATGTGGAGGCTGGTGACAGACACATAACTCCAAACTACAGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAAACATGTGGAGGCTGGTGACAGACACATAACTCCAAACTACAGGT  600

seq1  GGCTTCTGAGCTACACGACTTCAGCATGTTTCTTAAAATGATGCTCTTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTCTGAGCTACACGACTTCAGCATGTTTCTTAAAATGATGCTCTTGT  650

seq1  TATCAATTTCTTCCTATGATTAAAATGAGGATGATAATATTTTCCTTTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAATTTCTTCCTATGATTAAAATGAGGATGATAATATTTTCCTTTGG  700

seq1  AACTGTCATCAGGGTAATACAAAGATTAAGTATAAAAGTCCTGTAGCTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTCATCAGGGTAATACAAAGATTAAGTATAAAAGTCCTGTAGCTCA  750

seq1  CCTGGCATATAATAAAGTCAATAATGTTCACTTACTGTTAATTGTATCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCATATAATAAAGTCAATAATGTTCACTTACTGTTAATTGTATCTT  800

seq1  TATCACCATCATTGACATAAGAATAATTATAATAAATTATCAGACAAAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCACCATCATTGACATAAGAATAATTATAATAAATTATCAGACAAAAA  850

seq1  TTTACTAATCTTAATGTCAGTGTGGGAAGCTGCTGGGTAAATAAGAGTGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTAATCTTAATGTCAGTGTGGGAAGCTGCTGGGTAAATAAGAGTGG  900

seq1  AGTCTCTCACTGGAAGTTAGAAATAATTTCAAGATCATGAAAAGAAGTTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCTCACTGGAAGTTAGAAATAATTTCAAGATCATGAAAAGAAGTTA  950

seq1  TATTCATTTACATAGGAAAAGAACATAGGAACAAGTTCAAGTTATCTCAT  1000
      ||||||||||||||||||||| |||||||||| |||||||||||||||||
seq2  TATTCATTTACATAGGAAAAGGACATAGGAAC-AGTTCAAGTTATCTCAT  999

seq1  ACTATTTAATTGCCACTGTTAAAATACATCAGAGGATTCTTACTTA-TAT  1049
      ||||||| |||||||||||||||| |||||||||||||| |||||| |||
seq2  ACTATTT-ATTGCCACTGTTAAAA-ACATCAGAGGATTC-TACTTATTAT  1046

seq1  TTGAC-TGTCTTGTCCTAAGATAAGTTCATAAATCCATGTAATCCAATAT  1098
      ||||| |||||||| |||  ||||||||||||||||||||||||||||| 
seq2  TTGACTTGTCTTGTTCTAGAATAAGTTCATAAATCCATGTAATCCAATA-  1095

seq1  TTTCATTGTTAAATAA  1114
      ||||||  ||||||||
seq2  TTTCATGTTTAAATAA  1111