BAC Information

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BAC

Clone NameB6Ng01-114N18
Chromosome12 (Build37)
Map Location 47,467,300 - 47,468,389
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC664952, Nova1, LOC100039190
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-114N18.bB6Ng01-114N18.g
ACCDH920274DH920275
length9341,090
definitionDH920274|Mus musculus domesticus DNA, BAC clone: B6Ng01-114N18, 5' end.DH920275|Mus musculus domesticus DNA, BAC clone: B6Ng01-114N18, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacatgagcaattgcccttttatttttataagcacattgtttcct
tgtccatagctatcacattctttctgtctcctccttcacaaaaatcactg
aatcttgattgagaggtgatatagatgttctatttaaggttgaagaaaag
ggaatgttttatctacttattcatttatggtggcagtgcaaaatgttgct
ggcactacagaagtcagtatggaggttattaaaatttctagaagtagata
tagcacatgatacagctataccattcttgggcataaacccaatggattac
acatataatgacagagatagctgcttgcccatatttattgctgctgtatt
tacaataaataagaaatgaaaacaacttgaagactggatagtgaaagtat
attaatatttacataatgtactattatccagatgttaagtaaaccaaaat
tatgaaagtttaatggataaaactgaaaacaatcatcctgagttagagaa
aacagattcagagagacaaatatatatataatttgtgtatatcaaccttg
attcttcagatatgtgtgtttcacttgagatacttgtagagatcaagaaa
ttagtaaggaatcttagggaaagatttcaaagacaaagagatggaattca
gggttttaatgaaaaatgataagaaaaaggcttcatagtgatgggaaggt
tggtaggaaagatgaagaataactaaaagtaaatatcattttcaataaat
acatatagaaaactactattagagaagccttcctaaattatgtatataca
catatataaagagttaaaatgtcttttatcctataattgtacacccatac
tccctagtagataccacaggatagcaaatttaaaagcccattgctgggaa
tgagttatttggtttggaggtggttggtgagtaa

gaattccaaaggaataccatcatctccagcctttagaaagttacaatggc
ccaagtgccctagtggccaagttattcaaaggttggtttaacgtttttag
cagctctaacaggcagggatatttataattcacattttctgggagaaaaa
aactgaaccacaagtaaatatatatcatgttgaagctgcacagttgactc
gtaccagagataaggtgtctcagaagctcgatcctgcaaatagcactgca
tatgatctctttcacaataataatgcaggcaggcatttttgttggtttgc
ttattttttaagacctagtattcttccaaagagaacaatggcctatatcc
cataacttggtgaatggcacatatctgttcaccaggtaaacctgtgtact
gtttctatagtgggaagtgtttgccacacagtgccacttcgtggggggat
tttagtattttaagaagtgattttaggtaagcataagcttgcatacactc
ttggaaacctgtattatgccttgaagcatagcttggatgtgtgcaatgac
cagagccaaacaaaaaaccctgtttaaaaatgccctttctaagaatacac
aatgggattttggaggagaaggggtccatcgatccatagtcaatacagaa
ttatccaaagcatgtttaggccttgtttttctgtttatcatgtactattc
actgcatccagttttatgtttgctactgtagtactgtgctctcatcttcc
cacaaatgaaagcagggaatacctgtgccttgcaggatttcattgcactg
aggcatgctgcaatctgcaggcatcctgcatgtgagactgggggtcaggt
aactgggctctatcaagacacatcttcatgggcatctccaagcaggcatt
agagacagtgcataggacacagttgatctaacacaggagcattacaaata
caaatgtgtcaaaatggctggcagaatgcagagcaaacttttcagctttt
cattttagtcacaggatcagcagtcctcatcatctcaaatagagtaggag
attggaggtagttttttcatctgatcaagcaaagcaagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_47467300_47468389
seq2: B6Ng01-114N18.g_71_1160

seq1  GAATTCCAAAGGAATACCATCATCTCCAGCCTTTAGAAAGTTACAATGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAAGGAATACCATCATCTCCAGCCTTTAGAAAGTTACAATGGC  50

seq1  CCAAGTGCCCTAGTGGCCAAGTTATTCAAAGGTTGGTTTAACGTTTTTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTGCCCTAGTGGCCAAGTTATTCAAAGGTTGGTTTAACGTTTTTAG  100

seq1  CAGCTCTAACAGGCAGGGATATTTATAATTCACATTTTCTGGGAGAAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCTAACAGGCAGGGATATTTATAATTCACATTTTCTGGGAGAAAAA  150

seq1  AACTGAACCACAAGTAAATATATATCATGTTGAAGCTGCACAGTTGACTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAACCACAAGTAAATATATATCATGTTGAAGCTGCACAGTTGACTC  200

seq1  GTACCAGAGATAAGGTGTCTCAGAAGCTCGATCCTGCAAATAGCACTGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCAGAGATAAGGTGTCTCAGAAGCTCGATCCTGCAAATAGCACTGCA  250

seq1  TATGATCTCTTTCACAATAATAATGCAGGCAGGCATTTTTGTTGGTTTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATCTCTTTCACAATAATAATGCAGGCAGGCATTTTTGTTGGTTTGC  300

seq1  TTATTTTTTAAGACCTAGTATTCTTCCAAAGAGAACAATGGCCTATATCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTTTAAGACCTAGTATTCTTCCAAAGAGAACAATGGCCTATATCC  350

seq1  CATAACTTGGTGAATGGCACATATCTGTTCACCAGGTAAACCTGTGTACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAACTTGGTGAATGGCACATATCTGTTCACCAGGTAAACCTGTGTACT  400

seq1  GTTTCTATAGTGGGAAGTGTTTGCCACACAGTGCCACTTCGTGGGGGGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTATAGTGGGAAGTGTTTGCCACACAGTGCCACTTCGTGGGGGGAT  450

seq1  TTTAGTATTTTAAGAAGTGATTTTAGGTAAGCATAAGCTTGCATACACTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTATTTTAAGAAGTGATTTTAGGTAAGCATAAGCTTGCATACACTC  500

seq1  TTGGAAACCTGTATTATGCCTTGAAGCATAGCTTGGATGTGTGCAATGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAACCTGTATTATGCCTTGAAGCATAGCTTGGATGTGTGCAATGAC  550

seq1  CAGAGCCAAACAAAAAACCCTGTTTAAAAATGCCCTTTCTAAGAATACAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCCAAACAAAAAACCCTGTTTAAAAATGCCCTTTCTAAGAATACAC  600

seq1  AATGGGATTTTGGAGGAGAAGGGGTCCATCGATCCATAGTCAATACAGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGATTTTGGAGGAGAAGGGGTCCATCGATCCATAGTCAATACAGAA  650

seq1  TTATCCAAAGCATGTTTAGGCCTTGTTTTTCTGTTTATCATGTACTATTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCCAAAGCATGTTTAGGCCTTGTTTTTCTGTTTATCATGTACTATTC  700

seq1  ACTGCATCCAGTTTTATGTTTGCTACTGTAGTACTGTGCTCTCATCTTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCATCCAGTTTTATGTTTGCTACTGTAGTACTGTGCTCTCATCTTCC  750

seq1  CACAAATGAAAGCAGGGAATACCTGTGCCTTGCAGGATTTCATTGCACTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAATGAAAGCAGGGAATACCTGTGCCTTGCAGGATTTCATTGCACTG  800

seq1  AGGCATGCTGCAATCTGCAGGCATCCTGCATGTGAGACTGGGGGTCAGGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATGCTGCAATCTGCAGGCATCCTGCATGTGAGACTGGGGGTCAGGT  850

seq1  AACTGGGCTCTATCAGGACACATCTTCAT-GGCATCTCCAAGCAGGCATT  899
      ||||||||||||||| ||||||||||||| ||||||||||||||||||||
seq2  AACTGGGCTCTATCAAGACACATCTTCATGGGCATCTCCAAGCAGGCATT  900

seq1  AGAGACAGTGCATAGGACACAGTTGATCTAACACAGGAGCACTACAAATA  949
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AGAGACAGTGCATAGGACACAGTTGATCTAACACAGGAGCATTACAAATA  950

seq1  CAAATGTGTTCAAAATGGCTGGCAGAATGCAAGAGCAAACCTTTCCAGCT  999
      |||||||| ||||||||||||||||||||| |||||||| |||| |||||
seq2  CAAATGTG-TCAAAATGGCTGGCAGAATGC-AGAGCAAA-CTTTTCAGCT  997

seq1  TTTCA-TTTAGTCACAGGATCAGCAGGTCTCATCATCTCAAATAGAGTA-  1047
      ||||| ||||||||||||||||||||  ||||||||||||||||||||| 
seq2  TTTCATTTTAGTCACAGGATCAGCAGTCCTCATCATCTCAAATAGAGTAG  1047

seq1  GAGAATGGAGGTAG-TTTTTCAGCTGAGCAAGGCAAAGCAAGGA  1090
      |||| ||||||||| ||||||| |||| ||| ||||||||||||
seq2  GAGATTGGAGGTAGTTTTTTCATCTGATCAA-GCAAAGCAAGGA  1090


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