BAC Information

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BAC

Clone NameB6Ng01-115A02
Chromosome12 (Build37)
Map Location 112,183,065 - 112,359,833
singlet/doubletdoublet
Overlap gene4930573I19Rik, Ankrd9, 6030440G07Rik, Rcor1
Upstream geneLOC100040746, 3110009F21Rik, Dio3as, Dio3, EG629595, EG668245, LOC100040799, Ppp2r5c, 9430024F10Rik, Dync1h1, 1700001K19Rik, Hsp90aa1, Wdr20a, Rage, 2810455K09Rik, LOC100041649, 2810452K22Rik
Downstream gene4930595D18Rik, Traf3, Amn, Cdc42bpb, A230065H16Rik, 1200009I06Rik, Tnfaip2, Gm266, Eif5, Mark3, Ckb, 6720458F09Rik, Bag5, 2810002N01Rik, Klc1, Xrcc3, Zfyve21, Ppp1r13b, LOC100041886, 2010107E04Rik, BC048943, Tdrd9, A530050D06Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-115A02.bB6Ng01-115A02.g
ACCDH920380DH920381
length1,0841,124
definitionDH920380|Mus musculus domesticus DNA, BAC clone: B6Ng01-115A02, 5' end.DH920381|Mus musculus domesticus DNA, BAC clone: B6Ng01-115A02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(112,183,065 - 112,184,151)(112,358,694 - 112,359,833)
sequence
gaattccatgttgctaaaggaagtctcataggtgagtcaattactctagt
tttcacattatttttactttgtttatcttatttttcatggtggtgggatt
ctaacctagggattcacagaacatttaatgaacggctttaaggtctcctc
ttaagataatcagtaccagtgggaaagcggcctgtgacagaggcacccag
gctttgtggtctctttcctttctgttttctttttcattctgtcattccta
aaacttggtgtctggacgatgtgtcatcactttcctatggaaacctaatc
tgctgtaataaagacaaatgaggactagctcaatctcacaatccattccg
ggggtgggcagggaaatggctctgcaggtaaaagcatgtgtcacacaatc
ctacgggcctctgttcatcccgagaacttgcgtgagaatctagatacagc
caggcatggtagcacatgcctttaattccagcacccgggagccaaaggta
ggcagagctgagttcaatgacagcctggtctacatagtaagttccaggac
agccagggctatgtagagaaatcctgtctcaaaacaaacaacaaaaagcc
agatacagtggaggctcaggagagcacgtctgtgaggaaatggggaggca
gtgacagaagtggggagatggtcacatatatgacccaccagcagaacagg
agaccttgcccccaaaacaagaggagaagagaaaacgtaagtccagaagt
tgtcctctgatctccacacacatgccataacacacttgtggacacactca
cacaaagaaacttgtttaaagggggtatatggtcgggtagagatggctca
gcagttaagagtatgaggatacttcagatcccagtactcacataacaagc
cagctatcctgtgcatgcctgtgactagcgacaaggtaggcagaggcagg
agaatctttgggggcaaagaacaggatccccaggatcaaggagaaacctg
tctctagtcctgtgtgggaagtgatagacggaacacttggaccctcctct
gacctgatgagcatgcttggccacacccccacaa
gaattccctaactctgcagcatgggagacgatgaagttctacaagggacg
ctttgttctctacggtctggataaaagttgatctgtttgataccctttca
tctccaacagtgcttaacaggtgctcacaaaaatatccccgggctggcaa
gatggctcagtgggtaaggatgcttgccaactgcaccctctcatcagaag
ctacgtgacagtggacacgaaccaactccataaagctgtcttctacttct
gtacctatgcatactatgggcatgtgtgccttcctccccaaaggaaagaa
aaagaaattaaaaatattgttataatcctttgggttcctagacatttttc
atggctttgtatatatggcagttgtcccactaggccagcgggaggcttta
acctggctcctaagccaccagctaagacaccattgctctggatgctcctc
gggtctttggcaagattcccagatctctctgcatccttcttctgcacctg
aatctggtccttttcccaagactctgctctttctgtgggaaactgcattc
aaagatagcatgggctttgggacgggctccatgccccaacctgggtgggg
tcccctctctctgcctgtgctgcaggttggtgcctggatgaatcatgacc
ccaggtaagttaggctcagtctcttgaagtgtacagacctgattcttggc
ctgcacacaggaagggtctctaggtcaagtggggaagtggcctatggtta
ttctttgattcattctttgcagtcattccagacaccaaccaatcttgtcc
caggaaagctcttctctcccccagcttggggcattccacttccttctctc
tctgactggaacttggggattgtgttgttacccaccaggtaacatcaggt
gctactctgcagctgcagaatacctgctgataactgaaaagaaatttgtc
tttccctgagtcttagcaacttaattcactagtactttgctagggcagtg
ccatcctgctgctgcccaggagctgtcccagaagacccgcaggctgtcga
gcattcgactcactgcgtgcctctatggaactgccatgcctgaaaacttg
ctgactccattctctctgtacccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_112183065_112184151
seq2: B6Ng01-115A02.b_46_1129

seq1  GAATTCCATGTTGCTAAAGGAAGTCTCATAGGTGAGTCAATTACTCTAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGTTGCTAAAGGAAGTCTCATAGGTGAGTCAATTACTCTAGT  50

seq1  TTTCACATTATTTTTACTTTGTTTATCTTATTTTTCATGGTGGTGGGATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACATTATTTTTACTTTGTTTATCTTATTTTTCATGGTGGTGGGATT  100

seq1  CTAACCTAGGGATTCACAGAACATTTAATGAACGGCTTTAAGGTCTCCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACCTAGGGATTCACAGAACATTTAATGAACGGCTTTAAGGTCTCCTC  150

seq1  TTAAGATAATCAGTACCAGTGGGAAAGCGGCCTGTGACAGAGGCACCCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGATAATCAGTACCAGTGGGAAAGCGGCCTGTGACAGAGGCACCCAG  200

seq1  GCTTTGTGGTCTCTTTCCTTTCTGTTTTCTTTTTCATTCTGTCATTCCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGTGGTCTCTTTCCTTTCTGTTTTCTTTTTCATTCTGTCATTCCTA  250

seq1  AAACTTGGTGTCTGGACGATGTGTCATCACTTTCCTATGGAAACCTAATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTGGTGTCTGGACGATGTGTCATCACTTTCCTATGGAAACCTAATC  300

seq1  TGCTGTAATAAAGACAAATGAGGACTAGCTCAATCTCACAATCCATTCCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTAATAAAGACAAATGAGGACTAGCTCAATCTCACAATCCATTCCG  350

seq1  GGGGTGGGCAGGGAAATGGCTCTGCAGGTAAAAGCATGTGTCACACAATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTGGGCAGGGAAATGGCTCTGCAGGTAAAAGCATGTGTCACACAATC  400

seq1  CTACGGGCCTCTGTTCATCCCGAGAACTTGCGTGAGAATCTAGATACAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACGGGCCTCTGTTCATCCCGAGAACTTGCGTGAGAATCTAGATACAGC  450

seq1  CAGGCATGGTAGCACATGCCTTTAATTCCAGCACCCGGGAGCCAAAGGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCATGGTAGCACATGCCTTTAATTCCAGCACCCGGGAGCCAAAGGTA  500

seq1  GGCAGAGCTGAGTTCAATGACAGCCTGGTCTACATAGTAAGTTCCAGGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAGCTGAGTTCAATGACAGCCTGGTCTACATAGTAAGTTCCAGGAC  550

seq1  AGCCAGGGCTATGTAGAGAAATCCTGTCTCAAAACAAACAACAAAAAGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGGGCTATGTAGAGAAATCCTGTCTCAAAACAAACAACAAAAAGCC  600

seq1  AGATACAGTGGAGGCTCAGGAGAGCACGTCTGTGAGGAAATGGGGAGGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATACAGTGGAGGCTCAGGAGAGCACGTCTGTGAGGAAATGGGGAGGCA  650

seq1  GTGACAGAAGTGGGGAGATGGTCACATATATGACCCACCAGCAGAACAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACAGAAGTGGGGAGATGGTCACATATATGACCCACCAGCAGAACAGG  700

seq1  AGACCTTGCCCCCAAAACAAGAGGAGAAGAGAAAACGTAAGTCCAGAAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCTTGCCCCCAAAACAAGAGGAGAAGAGAAAACGTAAGTCCAGAAGT  750

seq1  TGTCCTCTGATCTCCACACACATGCCATAACACACTTGTGGACACACTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTCTGATCTCCACACACATGCCATAACACACTTGTGGACACACTCA  800

seq1  CACAAAGAAACTTGTTTAAAGGGGGTATATGGTCGGGTAGAGATGGCTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAAGAAACTTGTTTAAAGGGGGTATATGGTCGGGTAGAGATGGCTCA  850

seq1  GCAGTTAAGAGTATGAGGATACTTCAGATCCCAGTACTCACATAACAAGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTAAGAGTATGAGGATACTTCAGATCCCAGTACTCACATAACAAGC  900

seq1  CAGCTATCCTGTGCATGCCTGTGACTAGCGACAAGGTAGGCAGAGGCAGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTATCCTGTGCATGCCTGTGACTAGCGACAAGGTAGGCAGAGGCAGG  950

seq1  AGAATCTTT-GGGGCAAAGAACAGGATCCCCAGGATCAGGGAGAAACCTG  999
      ||||||||| |||||||||||||||||||||||||||| |||||||||||
seq2  AGAATCTTTGGGGGCAAAGAACAGGATCCCCAGGATCAAGGAGAAACCTG  1000

seq1  TCTCTAAGTCCTGTGTGGGAAGTGATAGACGGGAACACTTGGGACCCTCC  1049
      ||||| |||||||||||||||||||||||| ||||||||| |||||||||
seq2  TCTCT-AGTCCTGTGTGGGAAGTGATAGAC-GGAACACTT-GGACCCTCC  1047

seq1  TCTGAACCTGATGAGCATGCTTGGCCACACCCCCACAA  1087
      |||| |||||||||||||||||||||||||||||||||
seq2  TCTG-ACCTGATGAGCATGCTTGGCCACACCCCCACAA  1084

seq1: chr12_112358694_112359833
seq2: B6Ng01-115A02.g_67_1190 (reverse)

seq1  GGGGTACAGGAGAGAATGGAGTTCAGCAGGTTCTCAGCCATGGGCCAGTC  50
      |||||||| |||||||||||| |||||| ||| |||| |||||  |||| 
seq2  GGGGTACA-GAGAGAATGGAG-TCAGCAAGTTTTCAGGCATGG--CAGTT  46

seq1  TCATAGAGGCACGCAGTGAGTCGGAATGCTCCGACAGCCCTGCGGGTTCT  100
       ||||||||||||||||||||| ||||||| |||||| |||||||| |||
seq2  CCATAGAGGCACGCAGTGAGTC-GAATGCT-CGACAG-CCTGCGGG-TCT  92

seq1  TCTGGGACCAGCTCCCTGGGCAGCAGGCAGGATGGCACTGCCCTAGCAAA  150
      ||||||| ||||| ||||||||||| ||||||||||||||||||||||||
seq2  TCTGGGA-CAGCT-CCTGGGCAGCA-GCAGGATGGCACTGCCCTAGCAAA  139

seq1  GTACTAGTTGAATTTAAGTTGCTAAGACTCAGGGAAAGACAAATTTCTTT  200
      ||||||| |||| |||||||||||||||||||||||||||||||||| ||
seq2  GTACTAG-TGAA-TTAAGTTGCTAAGACTCAGGGAAAGACAAATTTC-TT  186

seq1  TTCAGTTATCAGCAGGTATTTCTGCAGCCTGCAGAGTAGCACCTGATGTT  250
      |||||||||||||||||| |||||||| ||||||||||||||||||||||
seq2  TTCAGTTATCAGCAGGTA-TTCTGCAG-CTGCAGAGTAGCACCTGATGTT  234

seq1  ACCTGGTGGGTAACAACACAATCCCCAAGTTCCAGTCAGAGAGAGAAGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGGTGGGTAACAACACAATCCCCAAGTTCCAGTCAGAGAGAGAAGGA  284

seq1  AGTGGAATGCCCCAAGCTGGGGGAGAGAAGAGCTTTCCTGGGACAAGATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGAATGCCCCAAGCTGGGGGAGAGAAGAGCTTTCCTGGGACAAGATT  334

seq1  GGTTGGTGTCTGGAATGACTGCAAAGAATGAATCAAAGAATAACCATAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGGTGTCTGGAATGACTGCAAAGAATGAATCAAAGAATAACCATAGG  384

seq1  CCACTTCCCCACTTGACCTAGAGACCCTTCCTGTGTGCAGGCCAAGAATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTTCCCCACTTGACCTAGAGACCCTTCCTGTGTGCAGGCCAAGAATC  434

seq1  AGGTCTGTACACTTCAAGAGACTGAGCCTAACTTACCTGGGGTCATGATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCTGTACACTTCAAGAGACTGAGCCTAACTTACCTGGGGTCATGATT  484

seq1  CATCCAGGCACCAACCTGCAGCACAGGCAGAGAGAGGGGACCCCACCCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCAGGCACCAACCTGCAGCACAGGCAGAGAGAGGGGACCCCACCCAG  534

seq1  GTTGGGGCATGGAGCCCGTCCCAAAGCCCATGCTATCTTTGAATGCAGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGGGCATGGAGCCCGTCCCAAAGCCCATGCTATCTTTGAATGCAGTT  584

seq1  TCCCACAGAAAGAGCAGAGTCTTGGGAAAAGGACCAGATTCAGGTGCAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACAGAAAGAGCAGAGTCTTGGGAAAAGGACCAGATTCAGGTGCAGA  634

seq1  AGAAGGATGCAGAGAGATCTGGGAATCTTGCCAAAGACCCGAGGAGCATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGATGCAGAGAGATCTGGGAATCTTGCCAAAGACCCGAGGAGCATC  684

seq1  CAGAGCAATGGTGTCTTAGCTGGTGGCTTAGGAGCCAGGTTAAAGCCTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCAATGGTGTCTTAGCTGGTGGCTTAGGAGCCAGGTTAAAGCCTCC  734

seq1  CGCTGGCCTAGTGGGACAACTGCCATATATACAAAGCCATGAAAAATGTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTGGCCTAGTGGGACAACTGCCATATATACAAAGCCATGAAAAATGTC  784

seq1  TAGGAACCCAAAGGATTATAACAATATTTTTAATTTCTTTTTCTTTCCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAACCCAAAGGATTATAACAATATTTTTAATTTCTTTTTCTTTCCTT  834

seq1  TGGGGAGGAAGGCACACATGCCCATAGTATGCATAGGTACAGAAGTAGAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGAGGAAGGCACACATGCCCATAGTATGCATAGGTACAGAAGTAGAA  884

seq1  GACAGCTTTATGGAGTTGGTTCGTGTCCACTGTCACGTAGCTTCTGATGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGCTTTATGGAGTTGGTTCGTGTCCACTGTCACGTAGCTTCTGATGA  934

seq1  GAGGGTGCAGTTGGCAAGCATCCTTACCCACTGAGCCATCTTGCCAGCCC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGTGCAGTTGGCAAGCATCCTTACCCACTGAGCCATCTTGCCAGCCC  984

seq1  GGGGATATTTTTGTGAGCACCTGTTAAGCACTGTTGGAGATGAAAGGGTA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGATATTTTTGTGAGCACCTGTTAAGCACTGTTGGAGATGAAAGGGTA  1034

seq1  TCAAACAGATCAACTTTTATCCAGACCGTAGAGAACAAAGCGTCCCTTGT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACAGATCAACTTTTATCCAGACCGTAGAGAACAAAGCGTCCCTTGT  1084

seq1  AGAACTTCATCGTCTCCCATGCTGCAGAGTTAGGGAATTC  1140
      ||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTTCATCGTCTCCCATGCTGCAGAGTTAGGGAATTC  1124