MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-115A08
Chromosome	12 (Build37)
Map Location	4,818,382 - 4,937,047
singlet/doublet	doublet
Overlap gene	0610009D07Rik, Fkbp1b, BC068281, Gm1964, Ubxd4, Atad2b
Upstream gene	Dnmt3a, LOC668289, Pomc1, C030014M07Rik, C330021A05Rik, Adcy3, Cenpo, 2410017P09Rik, Ncoa1, LOC100041995, LOC100042005, LOC100042014, Itsn2, 4930417G10Rik, A830093I24Rik, Pfn4, EG626534
Downstream gene	LOC668332, Klhl29, 2810032G03Rik, LOC435292, LOC100042095
Link	Open Mouse BAC browser

Click to get alignment info.

name	Dnmt3a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13435 MGI:1261827
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC668289 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668289
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 51 ESTs, 13 Proteins pseudo : _no_value

name	Pomc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18976 MGI:97742
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	C030014M07Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668212 MGI:2444851
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	C330021A05Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:217378 MGI:2443036
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Adcy3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:104111 MGI:99675
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cenpo (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:52504 MGI:1923800
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2410017P09Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69709 MGI:1916959
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 33 ESTs, 2 Proteins

name	Ncoa1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17977 MGI:1276523
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041995 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041995
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC100042005 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042005
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	LOC100042014 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042014
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs

name	Itsn2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20403 MGI:1338049
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930417G10Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74855 MGI:1922105
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	A830093I24Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:207921 MGI:2442121
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pfn4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:382562 MGI:1920121
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG626534 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:626534 MGI:3647156
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 576 ESTs, 8 Proteins

name	0610009D07Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66055 MGI:1913305
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fkbp1b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14226 MGI:1336205
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	BC068281 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:238037 MGI:3040699
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gm1964 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:432628 MGI:3583946
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ubxd4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:217379 MGI:2442310
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Atad2b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320817 MGI:2444798
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 89 ESTs, 18 Proteins

name	LOC668332 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668332
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Klhl29 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:208439 MGI:2683857
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 43 ESTs, 17 Proteins

name	2810032G03Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72669 MGI:1919919
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 17 ESTs

name	LOC435292 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:435292
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 19 ESTs, 25 Proteins pseudo : _no_value

name	LOC100042095 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042095
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Dnmt3a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114145580 GeneID:13435 MGI:1261827
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DNA methyltransferase 3A transcript_id : NM_007872.4

name	Dnmt3a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110224481 GeneID:13435 MGI:1261827
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DNA methyltransferase 3A transcript_id : NM_153743.3

name	Pomc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142346465 GeneID:18976 MGI:97742
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pro-opiomelanocortin-alpha transcript_id : NM_008895.3

name	C030014M07Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126723101 GeneID:668212 MGI:2444851
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA C030014M07 gene transcript_id : NM_001082483.1

name	C330021A05Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142352689 GeneID:217378 MGI:2443036
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA C330021A05 gene transcript_id : NM_153082.3

name	Adcy3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:24475810 GeneID:104111 MGI:99675
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : adenylate cyclase 3 transcript_id : NM_138305.2

name	Cenpo (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142373701 GeneID:52504 MGI:1923800
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : centromere protein O transcript_id : NM_134046.4

name	Ncoa1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6754799 GeneID:17977 MGI:1276523
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nuclear receptor coactivator 1 transcript_id : NM_010881.1

name	LOC100041995 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149262774 GeneID:100041995
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100041995 transcript_id : XM_001477354.1

name	LOC100042005 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149262776 GeneID:100042005
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to Dmn protein transcript_id : XM_001477368.1

name	LOC100042014 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149262778 GeneID:100042014
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs product : hypothetical protein LOC100042014 transcript_id : XM_001477387.1

name	Itsn2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46560562 GeneID:20403 MGI:1338049
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : intersectin 2 transcript_id : NM_011365.2

name	4930417G10Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142378242 GeneID:74855 MGI:1922105
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930417G10 gene transcript_id : NM_029107.2

name	A830093I24Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:139948412 GeneID:207921 MGI:2442121
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA A830093I24 gene transcript_id : NM_175431.3

name	Pfn4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803435 GeneID:382562 MGI:1920121
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : profilin family, member 4 transcript_id : NM_028376.2

name	0610009D07Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981274 GeneID:66055 MGI:1913305
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 0610009D07 gene transcript_id : NM_025323.2

name	Fkbp1b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:123173727 GeneID:14226 MGI:1336205
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : FK506 binding protein 1b transcript_id : NM_016863.3

name	BC068281 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142362297 GeneID:238037 MGI:3040699
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC068281 transcript_id : NM_173416.2

name	Gm1964 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85702024 GeneID:432628 MGI:3583946
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene model 1964, (NCBI) transcript_id : NM_001033488.1

name	Ubxd4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142375695 GeneID:217379 MGI:2442310
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : UBX domain containing 4 transcript_id : NM_145441.3

name	Atad2b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149262840 GeneID:320817 MGI:2444798
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 89 ESTs, 18 Proteins product : ATPase family, AAA domain containing 2B transcript_id : XM_001480129.1

name	Klhl29 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94392376 GeneID:208439 MGI:2683857
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 43 ESTs, 17 Proteins product : kelch-like 29 (Drosophila) transcript_id : XM_906219.2

name	Dnmt3a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6681209 GeneID:13435 MGI:1261827
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS] [Evidence IDA]; GO:0000791 - euchromatin [Evidence ISS]; GO:0000792 - heterochromatin [Evidence IDA]; GO:0005720 - nuclear heterochromatin [Evidence IDA]; GO:0016363 - nuclear matrix [Evidence ISS]; GO:0005634 - nucleus [Evidence ISS] [Evidence IDA] GO_function : GO:0003682 - chromatin binding [Evidence IDA]; GO:0003886 - DNA (cytosine-5-)-methyltransferase activity [Evidence IDA] [Evidence ISS]; GO:0003677 - DNA binding [Evidence IDA] [Evidence ISS]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008168 - methyltransferase activity [Evidence TAS]; GO:0005515 - protein binding [Evidence IPI]; GO:0016740 - transferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006306 - DNA methylation [Evidence ISS] [Evidence IDA]; GO:0006349 - imprinting [Evidence IMP] [Evidence ISS]; GO:0006346 - methylation-dependent chromatin silencing [Evidence IDA]; GO:0000122 - negative regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0007283 - spermatogenesis [Evidence IMP]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : DNA methyltransferase 3A isoform 1 protein_id : NP_031898.1

name	Dnmt3a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:24371231 CCDS:CCDS25784.1 GeneID:13435 MGI:1261827
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS] [Evidence IDA]; GO:0000791 - euchromatin [Evidence ISS]; GO:0000792 - heterochromatin [Evidence IDA]; GO:0005720 - nuclear heterochromatin [Evidence IDA]; GO:0016363 - nuclear matrix [Evidence ISS]; GO:0005634 - nucleus [Evidence ISS] [Evidence IDA] GO_function : GO:0003682 - chromatin binding [Evidence IDA]; GO:0003886 - DNA (cytosine-5-)-methyltransferase activity [Evidence IDA] [Evidence ISS]; GO:0003677 - DNA binding [Evidence IDA] [Evidence ISS]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008168 - methyltransferase activity [Evidence TAS]; GO:0005515 - protein binding [Evidence IPI]; GO:0016740 - transferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006306 - DNA methylation [Evidence ISS] [Evidence IDA]; GO:0006349 - imprinting [Evidence IMP] [Evidence ISS]; GO:0006346 - methylation-dependent chromatin silencing [Evidence IDA]; GO:0000122 - negative regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0007283 - spermatogenesis [Evidence IMP]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : DNA methyltransferase 3A isoform 2 protein_id : NP_714965.1

name	Pomc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679415 CCDS:CCDS25785.1 GeneID:18976 MGI:97742
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0005179 - hormone activity [Evidence IDA] GO_process : GO:0008217 - blood pressure regulation [Evidence IGI]; GO:0007218 - neuropeptide signaling pathway [Evidence IEA] codon_start : 1 note : adrenal corticotropic hormone; alpha-melanocyte stimulating hormone; beta-melanocyte stimulating hormone; gamma-melanocyte stimulating hormone product : pro-opiomelanocortin-alpha protein_id : NP_032921.1

name	C030014M07Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:126723102 GeneID:668212 MGI:2444851
definition	codon_start : 1 product : hypothetical protein LOC668212 protein_id : NP_001075952.1

name	C330021A05Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:70887607 CCDS:CCDS25786.1 GeneID:217378 MGI:2443036
definition	GO_function : GO:0031072 - heat shock protein binding [Evidence IEA] codon_start : 1 product : Rab-related GTP-binding protein protein_id : NP_694722.2

name	Adcy3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20270241 CCDS:CCDS25787.1 GeneID:104111 MGI:99675
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence TAS] GO_function : GO:0004016 - adenylate cyclase activity [Evidence TAS]; GO:0005516 - calmodulin binding [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016849 - phosphorus-oxygen lyase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007190 - adenylate cyclase activation [Evidence TAS]; GO:0006171 - cAMP biosynthesis [Evidence TAS]; GO:0009190 - cyclic nucleotide biosynthesis [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA] codon_start : 1 exception : mismatches in translation note : adenylyl cyclase 3 product : adenylate cyclase 3 protein_id : NP_612178.1

name	Cenpo (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29336049 CCDS:CCDS25788.1 GeneID:52504 MGI:1923800
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005694 - chromosome [Evidence IEA]; GO:0000775 - chromosome, pericentric region [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : centromere protein O protein_id : NP_598807.2

name	Ncoa1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754800 CCDS:CCDS25789.1 GeneID:17977 MGI:1276523
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0008415 - acyltransferase activity [Evidence IEA]; GO:0003682 - chromatin binding [Evidence IDA]; GO:0003677 - DNA binding [Evidence IDA]; GO:0004402 - histone acetyltransferase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA]; GO:0003713 - transcription coactivator activity [Evidence IEA]; GO:0030528 - transcription regulator activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0045941 - positive regulation of transcription [Evidence ISS]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 function : transcriptional coactivator for steroid and nuclear hormone receptors note : SRC-a/NCoA-1; steroid receptor coactivator-1 product : nuclear receptor coactivator 1 protein_id : NP_035011.1

name	LOC100041995 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149262775 GeneID:100041995
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477404.1

name	LOC100042005 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149262777 GeneID:100042005
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477418.1

name	LOC100042014 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149262779 GeneID:100042014
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477437.1

name	Itsn2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46560563 GeneID:20403 MGI:1338049
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005089 - Rho guanyl-nucleotide exchange factor activity [Evidence IEA] GO_process : GO:0006897 - endocytosis [Evidence IEA]; GO:0035023 - regulation of Rho protein signal transduction [Evidence IEA] codon_start : 1 note : Eh domain, SH3 domain regulator of endocytosis 2 product : SH3 domain protein 1B protein_id : NP_035495.2

name	4930417G10Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037391 GeneID:74855 MGI:1922105
definition	codon_start : 1 product : hypothetical protein LOC74855 protein_id : NP_083383.1

name	A830093I24Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:139948413 GeneID:207921 MGI:2442121
definition	codon_start : 1 product : hypothetical protein LOC207921 protein_id : NP_780640.2

name	Pfn4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:47058966 CCDS:CCDS25790.1 GeneID:382562 MGI:1920121
definition	GO_component : GO:0015629 - actin cytoskeleton [Evidence IEA]; GO:0005856 - cytoskeleton [Evidence IEA] GO_function : GO:0003779 - actin binding [Evidence IEA] GO_process : GO:0030036 - actin cytoskeleton organization and biogenesis [Evidence IEA]; GO:0007010 - cytoskeleton organization and biogenesis [Evidence IEA] codon_start : 1 note : profilin IV product : profilin family, member 4 protein_id : NP_082652.1

name	0610009D07Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13384692 CCDS:CCDS25791.1 GeneID:66055 MGI:1913305
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0006397 - mRNA processing [Evidence IEA]; GO:0000398 - nuclear mRNA splicing, via spliceosome [Evidence IEA] codon_start : 1 product : splicing factor 3B, 14 kDa subunit protein_id : NP_079599.1

name	Fkbp1b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:123173728 CCDS:CCDS25792.1 GeneID:14226 MGI:1336205
definition	GO_function : GO:0005528 - FK506 binding [Evidence ISS] codon_start : 1 note : FK506 binding protein 1b (12.6 kDa) product : FK506 binding protein 1b protein_id : NP_058559.3

name	BC068281 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27734144 CCDS:CCDS25793.1 GeneID:238037 MGI:3040699
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC238037 protein_id : NP_775592.1

name	Gm1964 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85702025 GeneID:432628 MGI:3583946
definition	codon_start : 1 product : hypothetical protein LOC432628 protein_id : NP_001028660.1

name	Ubxd4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21703880 CCDS:CCDS25795.1 GeneID:217379 MGI:2442310
definition	codon_start : 1 product : UBX domain containing 4 protein_id : NP_663416.1

name	Atad2b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149262841 GeneID:320817 MGI:2444798
definition	codon_start : 1 product : ATPase family, AAA domain containing 2B protein_id : XP_001480179.1

name	Klhl29 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94392377 GeneID:208439 MGI:2683857
definition	codon_start : 1 product : similar to mKIAA1921 protein protein_id : XP_911312.2

name	LOC668332 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668332
definition	number : 4 pseudo : _no_value

name	LOC668332 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668332
definition	number : 3 pseudo : _no_value

name	LOC668332 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668332
definition	number : 2 pseudo : _no_value

name	LOC668332 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668332
definition	number : 1 pseudo : _no_value

name	LOC100042095 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042095
definition	number : 2 pseudo : _no_value

name	LOC100042095 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042095
definition	number : 1 pseudo : _no_value

name	LOC668289 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149262830 GeneID:668289
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 51 ESTs, 13 Proteins product : similar to peptidylprolyl isomerase H (cyclophilin H) pseudo : _no_value transcript_id : XR_034506.1

name	2410017P09Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149262835 GeneID:69709 MGI:1916959
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 33 ESTs, 2 Proteins product : RIKEN cDNA 2410017P09 gene transcript_id : XR_001632.2

name	EG626534 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149262838 GeneID:626534 MGI:3647156
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 576 ESTs, 8 Proteins product : predicted gene, EG626534 transcript_id : XR_034533.1

name	2810032G03Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149262842 GeneID:72669 MGI:1919919
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 17 ESTs product : RIKEN cDNA 2810032G03 gene transcript_id : XR_035419.1

name	LOC435292 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149262843 GeneID:435292
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 19 ESTs, 25 Proteins product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) pseudo : _no_value transcript_id : XR_034553.1

clone name	MSMg01-435F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-361M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-115P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-095N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-534K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-213J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-465B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-308N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520E17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-445J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-329E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519A15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-402F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-089B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-071O18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-352C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417G14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-289A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-194F12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-496H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435E19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-390E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392C03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-089L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-268B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-290F14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262B01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-307P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-303C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-327O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-164A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-097F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-163J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-071A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-313O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-210B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-309A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485D16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-073C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-176I02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-329K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-128M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-307D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-406D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-406H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-216P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324J01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088L11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046G19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262E07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002O01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-106I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087P19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-282L01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-283O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186G08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136G04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090J18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138P19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199G17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090J18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-321M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289B21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121E24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212N17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043O22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-255I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163D17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114A20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258J17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001K15
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-115A08.b	B6Ng01-115A08.g
ACC	DH920392	DH920393
length	1,121	1,106
definition	DH920392\|Mus musculus domesticus DNA, BAC clone: B6Ng01-115A08, 5' end.	DH920393\|Mus musculus domesticus DNA, BAC clone: B6Ng01-115A08, 3' end.
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(4,935,916 - 4,937,047)	(4,818,382 - 4,819,500)
sequence	gaattctctggatgatagtttttgctttatttatttatttatttatttat ttatttatttatttatttaaattgggtatttcatttacatttccaatgct atcccaaaagtcccccatccgctcccccacccactcccccacccacccac tcccacttcttgcccctggcgttcccctgtactgagacagataaagtttg cacaaccaatgggcctctctttccactgatggccaactaggccatcttct gattcatatgcagctagagacacgagtgaaaatgaaaaaggagtgtcatg acacaaggttctaagcttgatcttaaatagtagtgggcagtaggaacaga tactacacattgagaactgtgactgagtagagaaactaccatagatctgg aagctcatgtcaaccccacatggaacactaccactatgaatccaaaactg taaagactcttgaaagtggaaggacatatggtcttaaatgcagacactta gcagctctcatctccactaatttcctccttccacaccatttactacatac ctattcttgtttgatatactaaagattataagggatgtggcagtccctac ctttcaagaaagttaaaacctaacatgtaggtatataaaaacttaagtgc tgagactactgaagagtgggggtagttttatttagactctttgtagaaca aatctataaaaattaaaatacagatcaagcaagatgtctcagcaggggct ggagagatggctcatcggttaagagcactgactgttcttccagaggtcct gagttcaaatcccagccaccacatgataactcataaccatctgtaatggg atctgatgccatcttctggtgtgtctggtatattcatataaataaaataa agtctttaaaaaaaaaaaaaaaagctgtctcacagaagaactgcttgctt caaaaacctggcacgacccagttaagatcagaggatacgatggacgaaca gttgtcatttgcctccacatgcacactgtgcacatgtgcccaacatatgc ccaccatacccactcgaacatcacagcattacactatcttttactaaaat aaatacggaaatttacttgcc	gaattccagtactgtagaggatgaggtaggaggactgcttcaagtttgag gccaacacgggctacaaagaaagacctggtggtggtggtgattgtagggt taaaccaagtactacaaaaattaaatgatgtagggccaggggcataactc cacggtagaatatttgcctaagatgctcaaggtccccagtatcacaaaaa caaacaaagcgaagcagatttatacaaacaaggaagagtaagacataatt cagctggcagcatgcctgtctagcatgcatagctctgggtttgatctcca gggctgcataaactagggcagtgcttccttcacagctgttggttgggatc aattagacatgtccatcaagggctgtgaagatgactccgttggtgaactg ctctagcagctagcagtgagcagaaagacctgcccttggactgtaagcac aacaactaagaaatgctggggaccttctccctgagacaggagaacccatg gggacttgctgggtccagctgagccagtaattctgggttcactgagagat tctgtctcaaaccataaggtggagaagacacgagaagatactgtattgac ctctggcttccacatgcacgcacacacagatgtgtaggcacacacagaga aagaaatgtgcatcagaatcagccagggaactttttaaaatgagcatgtc agggccaggcaactgtcgtttgaatggttctgatgcaaagctgcagttaa gtcgttatggtctaaagcctttgaggcccagggcaataacagtttgtcat tcatttaatatcagtcattttcttttagtagatgtatttatttattatga gtacactgtagctatcttcagacacaccagaagagaacctattacagatg gttctgagccaccatgtggttgctgggaattgaactcagacctctggaga agcagtcagtgctctaccactgagccatctctcagcccaatatcagtcat ttctgagagtcagttttgttcttggtctctattattactttgcaatcttt gtagcacgtcccccattggaacctttctttgtacaacaaatgcttaaaca agtgtc
quality values	Open. 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Hide. 61 61 55 55 61 36 25 12 11 15 11 21 25 28 43 49 43 61 61 61 59 43 61 61 49 59 49 52 43 59 61 59 61 59 59 61 61 61 61 59 59 52 59 59 59 52 52 59 59 59 61 52 59 45 52 59 49 59 59 59 59 59 61 59 59 59 59 61 61 61 61 59 59 61 59 59 59 61 59 52 61 59 59 61 61 59 61 61 59 61 61 59 59 59 43 59 52 61 61 59 59 59 59 61 61 59 59 59 59 59 59 61 61 61 61 59 59 61 61 61 61 61 59 59 59 61 61 61 59 61 59 52 52 61 61 59 61 59 61 61 61 61 59 59 61 59 59 61 61 61 61 52 61 59 61 52 59 49 59 59 59 59 59 59 59 59 59 59 59 59 59 41 61 59 61 61 59 61 59 59 59 61 59 61 61 61 61 59 52 59 59 59 59 59 61 59 59 59 59 59 61 59 59 59 59 52 59 59 59 52 43 59 59 45 52 52 36 61 59 59 61 59 59 59 59 49 59 59 61 59 59 59 61 61 61 59 61 59 59 59 61 59 61 61 59 61 59 59 61 61 61 61 59 61 61 61 61 59 59 59 59 59 59 61 59 59 59 61 59 61 61 61 59 59 59 59 61 59 59 59 59 59 59 61 61 59 61 61 61 59 59 59 61 61 61 59 59 59 59 59 59 59 61 59 59 59 59 52 59 52 59 52 59 59 59 43 59 59 59 59 59 52 61 61 61 61 59 59 59 59 59 52 59 59 59 59 61 61 59 59 59 59 49 52 59 59 59 59 61 61 59 59 59 61 59 59 61 59 59 59 61 59 59 61 59 59 59 49 43 52 59 59 52 59 61 59 61 59 61 52 61 59 59 61 59 59 59 59 49 43 59 61 61 52 55 55 55 55 55 55 52 52 52 52 52 49 52 52 41 52 55 52 52 52 49 43 43 55 55 52 52 52 43 61 52 52 52 55 55 55 55 61 55 55 55 55 61 61 52 52 52 49 55 41 55 55 52 55 50 55 49 50 55 50 50 61 55 55 55 41 61 55 55 55 61 55 55 61 55 55 50 61 55 55 50 55 61 55 55 50 50 47 55 55 37 61 55 55 55 55 55 49 61 55 55 61 61 55 61 61 55 50 55 61 55 55 61 61 61 50 52 52 47 32 50 52 43 52 52 53 53 61 35 53 61 50 50 50 61 61 61 61 61 53 61 61 61 53 53 50 42 33 38 50 50 32 61 45 53 39 37 50 50 61 50 53 61 61 50 32 61 61 61 39 50 45 38 27 61 32 61 50 61 39 61 61 42 53 42 42 47 24 61 39 52 53 45 53 45 50 47 52 61 43 47 40 61 61 46 53 61 40 33 53 53 53 42 47 50 45 39 39 47 38 46 47 39 34 52 38 53 38 50 42 45 30 43 33 45 53 53 53 53 53 45 50 43 47 30 34 53 38 53 42 52 28 27 52 38 47 47 50 30 52 40 30 25 28 27 52 52 32 50 38 32 20 47 28 36 52 30 21 16 27 32 22 47 53 53 43 50 43 53 47 50 38 45 53 47 43 34 36 47 24 40 39 53 50 45 38 39 45 57 46 41 53 42 45 37 50 33 41 42 50 53 42 41 16 10 45 43 41 32 53 45 53 53 20 37 50 32 38 52 35 45 37 38 28 36 19 37 37 33 31 27 30 43 32 22 41 27 32 32 32 36 43 30 21 50 47 16 44 30 37 37 30 23 30 50 23 50 47 27 35 32 47 7 39 39 28 20 34 57 30 27 35 30 31 34 31 31 22 16 27 31 40 17 40 32 22 20 29 14 27 47 12 22 52 24 16 36 31 38 42 26 29 24 14 57 46 10 35 22 53 44 40 34 31 11 28 17 30 24 26 18 36 33 22 24 21 12 18 29 34 32 27 23 21 30 35 30 8 10 20 13 18 30 37 6 21 15 13 13 18 18 23 21 22 31 23 6 30 17 26 30 28 30 24 25 13 43 27 24 25 8 23 37 17 24 21 28 29 29 11 12 11 16 29 30 36 11 5 21 25 24 25 29 10 25 29 10 12 30 14 20 30 26 34 29 19 33 22 20 24 30 41 12 15 24 28 6 12 22 24 24 23 18 14 11 26 13 28 30 27 24 29 21 26 7 13 19 6 24 34 28 18 16 11 21 8 16 17 22 12 19 12 10 11 7 29 20 12 9 12 29 29 11 14 18 14 12 29 36 10 17 16 22 17 18 26 9 19 33 25 12 17 29 23 22 34 31 9 30 21 8 14 9 51 18 23 36 24 28 10 32 29 28 24 25 14 22 6 9 8 13 13 7 10 19 13 15 6 5 7 9 6 10 8 7 22 14 24 19 30 22 28 28 21 32 15 14 12 22 8 14 12 8 6 12 16 21 11 4 10 11 15 12 16 7 4 5 9 17 11 44 17 24 5 31 5 8 6 5 6 15 11 5 20 22 31 13 30 9 13 14 29 29 18 5 7 18 11 4 3 4 5

Alignment Information

BAC End 1

BAC End 2

seq1: chr12_4935916_4937047
seq2: B6Ng01-115A08.b_48_1168 (reverse)

seq1  GGCAAGTGAAATCTCCGTTTTTATTTTAGTTAAAAGTGTGTGTGTGTGTG  50
      ||||||| |||| ||||| |||||||||| ||||||   ||||     ||
seq2  GGCAAGT-AAATTTCCGTATTTATTTTAG-TAAAAGATAGTGTAATGCTG  48

seq1  TGTGTGTGTGTGTGTGGGTGTGGGTGGGTATATGTAGGGCACATGTGCCA  100
      ||    |||  | |||||| | |||||| |||||| ||||||||||| ||
seq2  TG---ATGTTCGAGTGGGTAT-GGTGGGCATATGTTGGGCACATGTG-CA  93

seq1  CAGTGTGCATGTGGAGGCCAAAGGACAACTTTGTCGTCCATCCTATCCTT  150
      ||||||||||||||||| |||| ||||||| | ||||||||| |||||| 
seq2  CAGTGTGCATGTGGAGG-CAAATGACAACTGT-TCGTCCATCGTATCCTC  141

seq1  TTATCTTTACTTGGGTCCTGCCAGGTTTTTGAAGCAAGCAGTTCTTCTGT  200
      | ||||| || |||||| ||||||||||||||||||||||||||||||| 
seq2  TGATCTTAAC-TGGGTCGTGCCAGGTTTTTGAAGCAAGCAGTTCTTCTG-  189

seq1  TGAGACAGCTTTTTTTTTTTTTTTTAAAGACTTTATTTTATTTATATGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACAGCTTTTTTTTTTTTTTTTAAAGACTTTATTTTATTTATATGAA  239

seq1  TATACCAGACACACCAGAAGAGGGCATCAGATCCCATTACAGATGGTTAT  300
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TATACCAGACACACCAGAAGATGGCATCAGATCCCATTACAGATGGTTAT  289

seq1  GAGCTATCATGTGGTTGCTGGGATTTGAACTCAGGACCTCTGGAAGAACA  350
      ||| ||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GAGTTATCATGTGGTGGCTGGGATTTGAACTCAGGACCTCTGGAAGAACA  339

seq1  GTCAGTGCTCTTAACCGATGAGCCATCTCTCCAGCCCCTGCTGAGACATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGTGCTCTTAACCGATGAGCCATCTCTCCAGCCCCTGCTGAGACATC  389

seq1  TTGCTTGATCTGTATTTTAATTTTTATAGATTTGTTCTACAAAGAGTCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTGATCTGTATTTTAATTTTTATAGATTTGTTCTACAAAGAGTCTA  439

seq1  AATAAAACTACCCCCACTCTTCAGTAGTCTCAGCACTTAAGTTTTTATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAACTACCCCCACTCTTCAGTAGTCTCAGCACTTAAGTTTTTATAT  489

seq1  ACCTACATGTTAGGTTTTAACTTTCTTGAAAGGTAGGGACTGCCACATCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTACATGTTAGGTTTTAACTTTCTTGAAAGGTAGGGACTGCCACATCC  539

seq1  CTTATAATCTTTAGTATATCAAACAAGAATAGGTATGTAGTAAATGGTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATAATCTTTAGTATATCAAACAAGAATAGGTATGTAGTAAATGGTGT  589

seq1  GGAAGGAGGAAATTAGTGGAGATGAGAGCTGCTAAGTGTCTGCATTTAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGAGGAAATTAGTGGAGATGAGAGCTGCTAAGTGTCTGCATTTAAG  639

seq1  ACCATATGTCCTTCCACTTTCAAGAGTCTTTACAGTTTTGGATTCATAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATATGTCCTTCCACTTTCAAGAGTCTTTACAGTTTTGGATTCATAGT  689

seq1  GGTAGTGTTCCATGTGGGGTTGACATGAGCTTCCAGATCTATGGTAGTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGTGTTCCATGTGGGGTTGACATGAGCTTCCAGATCTATGGTAGTTT  739

seq1  CTCTACTCAGTCACAGTTCTCAATGTGTAGTATCTGTTCCTACTGCCCAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTACTCAGTCACAGTTCTCAATGTGTAGTATCTGTTCCTACTGCCCAC  789

seq1  TACTATTTAAGATCAAGCTTAGAACCTTGTGTCATGACACTCCTTTTTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTATTTAAGATCAAGCTTAGAACCTTGTGTCATGACACTCCTTTTTCA  839

seq1  TTTTCACTCGTGTCTCTAGCTGCATATGAATCAGAAGATGGCCTAGTTGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCACTCGTGTCTCTAGCTGCATATGAATCAGAAGATGGCCTAGTTGG  889

seq1  CCATCAGTGGAAAGAGAGGCCCATTGGTTGTGCAAACTTTATCTGTCTCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCAGTGGAAAGAGAGGCCCATTGGTTGTGCAAACTTTATCTGTCTCA  939

seq1  GTACAGGGGAACGCCAGGGGCAAGAAGTGGGAGTGGGTGGGTGGGGGAGT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAGGGGAACGCCAGGGGCAAGAAGTGGGAGTGGGTGGGTGGGGGAGT  989

seq1  GGGTGGGGGAGCGGATGGGGGACTTTTGGGATAGCATTGGAAATGTAAAT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGGGGGAGCGGATGGGGGACTTTTGGGATAGCATTGGAAATGTAAAT  1039

seq1  GAAATACCCAATTTAAATAAATAAATAAATAAATAAATAAATAAATAAAT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATACCCAATTTAAATAAATAAATAAATAAATAAATAAATAAATAAAT  1089

seq1  AAATAAAGCAAAAACTATCATCCAGAGAATTC  1132
      ||||||||||||||||||||||||||||||||
seq2  AAATAAAGCAAAAACTATCATCCAGAGAATTC  1121

seq1: chr12_4818382_4819500
seq2: B6Ng01-115A08.g_68_1173

seq1  GAATTCCAGTACTGTAGAGGATGAGGTAGGAGGACTGCTTCAAGTTTGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTACTGTAGAGGATGAGGTAGGAGGACTGCTTCAAGTTTGAG  50

seq1  GCCAACACGGGCTACAAAGAAAGACCTGGTGGTGGTGGTGATTGTAGGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAACACGGGCTACAAAGAAAGACCTGGTGGTGGTGGTGATTGTAGGGT  100

seq1  TAAACCAAGTACTACAAAAATTAAATGATGTAGGGCCAGGGGCATAACTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCAAGTACTACAAAAATTAAATGATGTAGGGCCAGGGGCATAACTC  150

seq1  CACGGTAGAATATTTGCCTAAGATGCTCAAGGTCCCCAGTATCACAAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGGTAGAATATTTGCCTAAGATGCTCAAGGTCCCCAGTATCACAAAAA  200

seq1  CAAACAAAGCGAAGCAGATTTATACAAACAAGGAAGAGTAAGACATAATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAAAGCGAAGCAGATTTATACAAACAAGGAAGAGTAAGACATAATT  250

seq1  CAGCTGGCAGCATGCCTGTCTAGCATGCATAGCTCTGGGTTTGATCTCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGGCAGCATGCCTGTCTAGCATGCATAGCTCTGGGTTTGATCTCCA  300

seq1  GGGCTGCATAAACTAGGGCAGTGCTTCCTTCACAGCTGTTGGTTGGGATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTGCATAAACTAGGGCAGTGCTTCCTTCACAGCTGTTGGTTGGGATC  350

seq1  AATTAGACATGTCCATCAAGGGCTGTGAAGATGACTCCGTTGGTGAACTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGACATGTCCATCAAGGGCTGTGAAGATGACTCCGTTGGTGAACTG  400

seq1  CTCTAGCAGCTAGCAGTGAGCAGAAAGACCTGCCCTTGGACTGTAAGCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAGCAGCTAGCAGTGAGCAGAAAGACCTGCCCTTGGACTGTAAGCAC  450

seq1  AACAACTAAGAAATGCTGGGGACCTTCTCCCTGAGACAGGAGAACCCATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACTAAGAAATGCTGGGGACCTTCTCCCTGAGACAGGAGAACCCATG  500

seq1  GGGACTTGCTGGGTCCAGCTGAGCCAGTAATTCTGGGTTCACTGAGAGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACTTGCTGGGTCCAGCTGAGCCAGTAATTCTGGGTTCACTGAGAGAT  550

seq1  TCTGTCTCAAACCATAAGGTGGAGAAGACACGAGAAGATACTGTATTGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCTCAAACCATAAGGTGGAGAAGACACGAGAAGATACTGTATTGAC  600

seq1  CTCTGGCTTCCACATGCACGCACACACAGATGTGTAGGCACACACAGAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGCTTCCACATGCACGCACACACAGATGTGTAGGCACACACAGAGA  650

seq1  AAGAAATGTGCATCAGAATCAGCCAGGGAACTTTTTAAAATGAGCATGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAATGTGCATCAGAATCAGCCAGGGAACTTTTTAAAATGAGCATGTC  700

seq1  AGGGCCAGGCAACTGTCGTTTGAATGGTTCTGATGCAAAGCTGCAGTTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCCAGGCAACTGTCGTTTGAATGGTTCTGATGCAAAGCTGCAGTTAA  750

seq1  GTCGTTATGGTCTAAAGCCTTTGAGGCCCAGGGCAATAACAGTTTGTCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGTTATGGTCTAAAGCCTTTGAGGCCCAGGGCAATAACAGTTTGTCAT  800

seq1  TCATTAAATATCAGTCA-TTTCTTTTAGTAGATGTATTTATTTATTATGA  849
      ||||| ||||||||||| ||||||||||||||||||||||||||||||||
seq2  TCATTTAATATCAGTCATTTTCTTTTAGTAGATGTATTTATTTATTATGA  850

seq1  GTACACTGTAGCTATCTTCAGACACACCAGAAGAGAACCTATTACAGATG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACACTGTAGCTATCTTCAGACACACCAGAAGAGAACCTATTACAGATG  900

seq1  GTTCTGAGCCACCATGTGGTTGCTGGGAATTGAACTCAAGACCTCTGGAA  949
      ||||||||||||||||||||||||||||||||||||| ||||||||||| 
seq2  GTTCTGAGCCACCATGTGGTTGCTGGGAATTGAACTC-AGACCTCTGGAG  949

seq1  GAGCAGTCAGTGCTCTTAACCACTGAGCCATCTCTCCAGCCCAATATCAG  999
       |||||||||||||||  ||||||||||||||||| ||||||||||||||
seq2  AAGCAGTCAGTGCTCT--ACCACTGAGCCATCTCT-CAGCCCAATATCAG  996

seq1  TCATTTCTGAGAAGTCAGTTTTGTTCCTAGGTTCTCTAATAATTTACTTT  1049
      ||||||||||| |||||||||||||| |  | |||||| ||  |||||||
seq2  TCATTTCTGAG-AGTCAGTTTTGTTCTT--GGTCTCTATTA--TTACTTT  1041

seq1  GCAATCTTTGTAAGCCACATCCCCACATTGGCACCTTTCTTTGTACAACA  1099
      ||||||||||||   ||| ||||| |||||| ||||||||||||||||||
seq2  GCAATCTTTGTA--GCACGTCCCC-CATTGGAACCTTTCTTTGTACAACA  1088

seq1  AATGGCTTAAACAAAGTGTC  1119
      ||| |||||||| |||||||
seq2  AAT-GCTTAAAC-AAGTGTC  1106

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information