BAC Information

Click to search

BAC

Clone NameB6Ng01-115D24
Chromosome12 (Build37)
Map Location 65,037,375 - 65,038,456
singlet/doubletsinglet
Overlap genenone
Upstream geneEG382606
Downstream geneLOC435302, EG623046, LOC623123, LOC217645, LOC217647, Gm527
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-115D24.bB6Ng01-115D24.g
ACCDH920564DH920565
length9821,073
definitionDH920564|Mus musculus domesticus DNA, BAC clone: B6Ng01-115D24, 5' end.DH920565|Mus musculus domesticus DNA, BAC clone: B6Ng01-115D24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgagccccattttttaatggggttatttgatt
ttctggagtccaccttcttgagttctttatatatattggatattagtccc
ctatctgatttaggaaagggaaagatactttcccaatctgttggtggcct
ttttctctttttgacggtgtcttttgtctttcagaagctttgcaatttta
tgaggtcccttttgttgattcttgatcttacagcacaagccattgctttt
ctattcaggaattttccccctgtacccatatcttcaaggcttttccctac
tttctcctctataagtttcagtgtctctggttttatgtggagttccttaa
tccacttagatttgagcttagtacaaggagataggaatggatcaattcgc
attcttctacatgataaccgccagttgtgccagcaccattttttgaaaat
gctatcttttttacactggatggttttgctcccttgtcaaagatcaactg
accataattgtaggagttaaagagacacagtttggagctgagatgaaagg
atggaccatctagagagtgccatatccggggatccatcccataatcagct
tccaaacgctgacaccattacatacactagcaagattttgctgaaaggac
ccagatatagctgtctcttgtgagactatgctggggcctagcaaacacag
aagtggatgctcacagtcagctattggatagatcacagggccccccaatg
gaggagatagagaaagtaaccaaggagctaaagggatctgcaaccctata
ggtggaacaaaaatatgaactacccagtactccccagagcccttgtctct
agctgcatatatatcagaagatggcttagttggccatcagtggaaagaga
ggcccattggttgtgcaaactttatctgctcagtacaggggaatgccagg
gccaagaagtggagtggtggatgggggagtgt
gaattcttggccatatacaagcattttaatcactgtaatgtgagcatttc
gctgatgtttgcatgggaggaaattctggtttaatttcagaaaagtattt
tagttatgtattaaaaattaggagatatttataaatcagaaaataatgtt
taaatagttaagaatactatgatcgcagctagcattcaaaaaaagagtcc
aaagactcacgtattgaaggcttagttggggctttagagaagtgattaga
taataagaattcttacttccttcattactagattaatccacccatgcatt
cataatcccctggtatttttgttacagtgattaaaactagaagacaactc
ctggtagaagtacttagctcatggaggcatgtctttgctgggtatatctc
accccacagctccttctggtctctgattactggccactattggatgagta
aacttctgtggataactgttgtgtgcctcacttcacacttgagacaatag
aactggacaataatggcatcaaatctctaaaagtgtgagtctaaataaat
atttttaaactcatagttttctctttcagagaatttgttataatacacaa
agttgactaatgcaacaactaaaaacacttacaaaagttaaagctcccat
cctttgactagaccatgaatggttcttagtctgagaattttgttttgcta
atcaaatgaatttttattaaaaagtaatcaagaaccaaaaaggaatctag
aaactgaaagtaaagtttacagatttgattcaatcaagttaacaaagatt
ttagggacaacaattcttacattaaaaataatattttgtataacaattta
aacagaatgacttctggtttcaatagatttggcaacataaaagacactaa
ttttccaaaaatattttactgtaggattatatttgtgtgtactaatattc
tacatacaagtcttgcagtgagtggttctagaaactcatatccgttcact
aaaacccatataaaataagtaaagtggagagtcaagactatgaagattct
caggaaactaaagtgctcaaagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_65037375_65038456
seq2: B6Ng01-115D24.g_68_1140

seq1  GAATTCTTGGCCATATACAAGCATTTTAATCACTGTAATGTGAGCATTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGGCCATATACAAGCATTTTAATCACTGTAATGTGAGCATTTC  50

seq1  GCTGATGTTTGCATGGGAGGAAATTCTGGTTTAATTTCAGAAAAGTATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGATGTTTGCATGGGAGGAAATTCTGGTTTAATTTCAGAAAAGTATTT  100

seq1  TAGTTATGTATTAAAAATTAGGAGATATTTATAAATCAGAAAATAATGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTATGTATTAAAAATTAGGAGATATTTATAAATCAGAAAATAATGTT  150

seq1  TAAATAGTTAAGAATACTATGATCGCAGCTAGCATTCAAAAAAAGAGTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAGTTAAGAATACTATGATCGCAGCTAGCATTCAAAAAAAGAGTCC  200

seq1  AAAGACTCACGTATTGAAGGCTTAGTTGGGGCTTTAGAGAAGTGATTAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACTCACGTATTGAAGGCTTAGTTGGGGCTTTAGAGAAGTGATTAGA  250

seq1  TAATAAGAATTCTTACTTCCTTCATTACTAGATTAATCCACCCATGCATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAGAATTCTTACTTCCTTCATTACTAGATTAATCCACCCATGCATT  300

seq1  CATAATCCCCTGGTATTTTTGTTACAGTGATTAAAACTAGAAGACAACTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATCCCCTGGTATTTTTGTTACAGTGATTAAAACTAGAAGACAACTC  350

seq1  CTGGTAGAAGTACTTAGCTCATGGAGGCATGTCTTTGCTGGGTATATCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTAGAAGTACTTAGCTCATGGAGGCATGTCTTTGCTGGGTATATCTC  400

seq1  ACCCCACAGCTCCTTCTGGTCTCTGATTACTGGCCACTATTGGATGAGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCACAGCTCCTTCTGGTCTCTGATTACTGGCCACTATTGGATGAGTA  450

seq1  AACTTCTGTGGATAACTGTTGTGTGCCTCACTTCACACTTGAGACAATAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCTGTGGATAACTGTTGTGTGCCTCACTTCACACTTGAGACAATAG  500

seq1  AACTGGACAATAATGGCATCAAATCTCTAAAAGTGTGAGTCTAAATAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGACAATAATGGCATCAAATCTCTAAAAGTGTGAGTCTAAATAAAT  550

seq1  ATTTTTAAACTCATAGTTTTCTCTTTCAGAGAATTTGTTATAATACACAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTAAACTCATAGTTTTCTCTTTCAGAGAATTTGTTATAATACACAA  600

seq1  AGTTGACTAATGCAACAACTAAAAACACTTACAAAAGTTAAAGCTCCCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGACTAATGCAACAACTAAAAACACTTACAAAAGTTAAAGCTCCCAT  650

seq1  CCTTTGACTAGACCATGAATGGTTCTTAGTCTGAGAATTTTGTTTTGCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGACTAGACCATGAATGGTTCTTAGTCTGAGAATTTTGTTTTGCTA  700

seq1  ATCAAATGAATTTTTATTAAAAAGTAATCAAGAACCAAAAAGGAATCTAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAATGAATTTTTATTAAAAAGTAATCAAGAACCAAAAAGGAATCTAG  750

seq1  AAACTGAAAGTAAAGTTTACAGATTTGATTCAATCAAGTTAACAAAGATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGAAAGTAAAGTTTACAGATTTGATTCAATCAAGTTAACAAAGATT  800

seq1  TTAGGGACAACAATTCTTACATTAAAAATAATATTTTGTATAACAATTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGGACAACAATTCTTACATTAAAAATAATATTTTGTATAACAATTTA  850

seq1  AACAGAATGACTTCTGGTTTCAATAGATTTGGCAACATAAAAGACACTAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAATGACTTCTGGTTTCAATAGATTTGGCAACATAAAAGACACTAA  900

seq1  TTTTCCAAAAATATTTTACTGTAGGATTATATTTGTGTGTACTAATATTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCAAAAATATTTTACTGTAGGATTATATTTGTGTGTACTAATATTC  950

seq1  TACATACAAGTCTTGCAGTGAGTGGTTTCTAGAAACTCATATCCGTTTCA  1000
      ||||||||||||||||||||||||| ||||||||||||||||||| ||||
seq2  TACATACAAGTCTTGCAGTGAGTGG-TTCTAGAAACTCATATCCG-TTCA  998

seq1  CTAAAACCCATATTAAAATAAGTAAAGTTGGAGAGTCAAAGACTATGAAA  1050
      |||||||||||| |||||||||||||| ||||||||| ||||||||| ||
seq2  CTAAAACCCATA-TAAAATAAGTAAAG-TGGAGAGTC-AAGACTATG-AA  1044

seq1  GATTTCTCCAGGAAACTAAAGTGCTTCAAAGT  1082
      || |||| |||||||||||||||| |||||||
seq2  GA-TTCT-CAGGAAACTAAAGTGC-TCAAAGT  1073