MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-115M21
Chromosome	12 (Build37)
Map Location	5,416,143 - 5,509,922
singlet/doublet	doublet
Overlap gene	2810032G03Rik
Upstream gene	Ncoa1, LOC100041995, LOC100042005, LOC100042014, Itsn2, 4930417G10Rik, A830093I24Rik, Pfn4, EG626534, 0610009D07Rik, Fkbp1b, BC068281, Gm1964, Ubxd4, Atad2b, LOC668332, Klhl29
Downstream gene	LOC435292, LOC100042095, LOC672098, LOC100043137, LOC238049, LOC100042118
Link	Open Mouse BAC browser

Click to get alignment info.

name	Ncoa1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17977 MGI:1276523
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041995 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041995
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC100042005 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042005
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	LOC100042014 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042014
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs

name	Itsn2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20403 MGI:1338049
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930417G10Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74855 MGI:1922105
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	A830093I24Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:207921 MGI:2442121
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pfn4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:382562 MGI:1920121
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG626534 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:626534 MGI:3647156
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 576 ESTs, 8 Proteins

name	0610009D07Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66055 MGI:1913305
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fkbp1b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14226 MGI:1336205
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	BC068281 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:238037 MGI:3040699
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gm1964 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:432628 MGI:3583946
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ubxd4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:217379 MGI:2442310
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Atad2b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320817 MGI:2444798
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 89 ESTs, 18 Proteins

name	LOC668332 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668332
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Klhl29 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:208439 MGI:2683857
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 43 ESTs, 17 Proteins

name	2810032G03Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72669 MGI:1919919
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 17 ESTs

name	LOC435292 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:435292
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 19 ESTs, 25 Proteins pseudo : _no_value

name	LOC100042095 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042095
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC672098 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:672098
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC100043137 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043137
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC238049 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:238049
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC100042118 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042118
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Ncoa1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6754799 GeneID:17977 MGI:1276523
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nuclear receptor coactivator 1 transcript_id : NM_010881.1

name	LOC100041995 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149262774 GeneID:100041995
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100041995 transcript_id : XM_001477354.1

name	LOC100042005 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149262776 GeneID:100042005
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to Dmn protein transcript_id : XM_001477368.1

name	LOC100042014 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149262778 GeneID:100042014
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs product : hypothetical protein LOC100042014 transcript_id : XM_001477387.1

name	Itsn2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46560562 GeneID:20403 MGI:1338049
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : intersectin 2 transcript_id : NM_011365.2

name	4930417G10Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142378242 GeneID:74855 MGI:1922105
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930417G10 gene transcript_id : NM_029107.2

name	A830093I24Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:139948412 GeneID:207921 MGI:2442121
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA A830093I24 gene transcript_id : NM_175431.3

name	Pfn4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803435 GeneID:382562 MGI:1920121
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : profilin family, member 4 transcript_id : NM_028376.2

name	0610009D07Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981274 GeneID:66055 MGI:1913305
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 0610009D07 gene transcript_id : NM_025323.2

name	Fkbp1b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:123173727 GeneID:14226 MGI:1336205
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : FK506 binding protein 1b transcript_id : NM_016863.3

name	BC068281 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142362297 GeneID:238037 MGI:3040699
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC068281 transcript_id : NM_173416.2

name	Gm1964 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85702024 GeneID:432628 MGI:3583946
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene model 1964, (NCBI) transcript_id : NM_001033488.1

name	Ubxd4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142375695 GeneID:217379 MGI:2442310
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : UBX domain containing 4 transcript_id : NM_145441.3

name	Atad2b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149262840 GeneID:320817 MGI:2444798
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 89 ESTs, 18 Proteins product : ATPase family, AAA domain containing 2B transcript_id : XM_001480129.1

name	Klhl29 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94392376 GeneID:208439 MGI:2683857
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 43 ESTs, 17 Proteins product : kelch-like 29 (Drosophila) transcript_id : XM_906219.2

name	LOC100043137 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149262844 GeneID:100043137
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100043137 transcript_id : XM_001480137.1

name	LOC100041995 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149262775 GeneID:100041995
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477404.1

name	LOC100042005 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149262777 GeneID:100042005
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477418.1

name	LOC100042014 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149262779 GeneID:100042014
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477437.1

name	Itsn2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46560563 GeneID:20403 MGI:1338049
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005089 - Rho guanyl-nucleotide exchange factor activity [Evidence IEA] GO_process : GO:0006897 - endocytosis [Evidence IEA]; GO:0035023 - regulation of Rho protein signal transduction [Evidence IEA] codon_start : 1 note : Eh domain, SH3 domain regulator of endocytosis 2 product : SH3 domain protein 1B protein_id : NP_035495.2

name	4930417G10Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037391 GeneID:74855 MGI:1922105
definition	codon_start : 1 product : hypothetical protein LOC74855 protein_id : NP_083383.1

name	A830093I24Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:139948413 GeneID:207921 MGI:2442121
definition	codon_start : 1 product : hypothetical protein LOC207921 protein_id : NP_780640.2

name	Pfn4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:47058966 CCDS:CCDS25790.1 GeneID:382562 MGI:1920121
definition	GO_component : GO:0015629 - actin cytoskeleton [Evidence IEA]; GO:0005856 - cytoskeleton [Evidence IEA] GO_function : GO:0003779 - actin binding [Evidence IEA] GO_process : GO:0030036 - actin cytoskeleton organization and biogenesis [Evidence IEA]; GO:0007010 - cytoskeleton organization and biogenesis [Evidence IEA] codon_start : 1 note : profilin IV product : profilin family, member 4 protein_id : NP_082652.1

name	0610009D07Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13384692 CCDS:CCDS25791.1 GeneID:66055 MGI:1913305
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0006397 - mRNA processing [Evidence IEA]; GO:0000398 - nuclear mRNA splicing, via spliceosome [Evidence IEA] codon_start : 1 product : splicing factor 3B, 14 kDa subunit protein_id : NP_079599.1

name	Fkbp1b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:123173728 CCDS:CCDS25792.1 GeneID:14226 MGI:1336205
definition	GO_function : GO:0005528 - FK506 binding [Evidence ISS] codon_start : 1 note : FK506 binding protein 1b (12.6 kDa) product : FK506 binding protein 1b protein_id : NP_058559.3

name	BC068281 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27734144 CCDS:CCDS25793.1 GeneID:238037 MGI:3040699
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC238037 protein_id : NP_775592.1

name	Gm1964 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85702025 GeneID:432628 MGI:3583946
definition	codon_start : 1 product : hypothetical protein LOC432628 protein_id : NP_001028660.1

name	Ubxd4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21703880 CCDS:CCDS25795.1 GeneID:217379 MGI:2442310
definition	codon_start : 1 product : UBX domain containing 4 protein_id : NP_663416.1

name	Atad2b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149262841 GeneID:320817 MGI:2444798
definition	codon_start : 1 product : ATPase family, AAA domain containing 2B protein_id : XP_001480179.1

name	Klhl29 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94392377 GeneID:208439 MGI:2683857
definition	codon_start : 1 product : similar to mKIAA1921 protein protein_id : XP_911312.2

name	LOC100043137 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149262845 GeneID:100043137
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480187.1

name	LOC668332 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668332
definition	number : 4 pseudo : _no_value

name	LOC668332 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668332
definition	number : 3 pseudo : _no_value

name	LOC668332 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668332
definition	number : 2 pseudo : _no_value

name	LOC668332 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668332
definition	number : 1 pseudo : _no_value

name	LOC100042095 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042095
definition	number : 2 pseudo : _no_value

name	LOC100042095 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042095
definition	number : 1 pseudo : _no_value

name	LOC672098 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:672098
definition	number : 1 pseudo : _no_value

name	LOC672098 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:672098
definition	number : 2 pseudo : _no_value

name	LOC238049 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:238049
definition	number : 1 pseudo : _no_value

name	LOC100042118 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042118
definition	number : 2 pseudo : _no_value

name	EG626534 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149262838 GeneID:626534 MGI:3647156
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 576 ESTs, 8 Proteins product : predicted gene, EG626534 transcript_id : XR_034533.1

name	2810032G03Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149262842 GeneID:72669 MGI:1919919
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 17 ESTs product : RIKEN cDNA 2810032G03 gene transcript_id : XR_035419.1

name	LOC435292 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149262843 GeneID:435292
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 19 ESTs, 25 Proteins product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) pseudo : _no_value transcript_id : XR_034553.1

clone name	MSMg01-390E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-089B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-071O18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-352C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417G14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-289A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-194F12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-496H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435E19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-390E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392C03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-089L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-268B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-290F14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262B01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-307P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-303C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-327O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-164A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-097F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-163J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-071A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-313O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-210B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-309A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485D16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-073C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-176I02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-329K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-128M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-307D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-406D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-406H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-216P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373C23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-472M21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-189M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-064O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-160G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-431J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-206D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-150L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-150L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-127I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-127L13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404K21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-391L10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-156L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-187P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-290F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-189J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-236D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376J09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-048C09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-046P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-048A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-283O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090J18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138P19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199G17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090J18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-321M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289B21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121E24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212N17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043O22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-255I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163D17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114A20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258J17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-051D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328M05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117H03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-067F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045A10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060A19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015D09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342L12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-106F01
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-115M21.b	B6Ng01-115M21.g
ACC	DH920974	DH920975
length	874	1,097
definition	DH920974\|Mus musculus domesticus DNA, BAC clone: B6Ng01-115M21, 5' end.	DH920975\|Mus musculus domesticus DNA, BAC clone: B6Ng01-115M21, 3' end.
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(5,416,143 - 5,417,016)	(5,508,805 - 5,509,922)
sequence	gaattcacacaatagagtatcatttagcaataaaaaaatgaagtgttgat acatattacaacatcgatggaccctgaaacataccgggaacaaagccagt gatgtaggatgctgggctatgctgcagagtcggaagtagacagaaagtag attactcctagccttgggctgtggagtttggagggaatttggagtgactg ctaatggatgtggcatttctatttggggtaatgaaaatgttctaaaatgg atggtagtgatagatgttcaactttttgcatatactaaaaagtacagaat tatattttcagtgggtggattctaatggtatgtgaattatatttcaataa agctgttcaaattaattaatttattgaattaatgtgaaagcagcctggct ctctgatgacagcatgactgagcagggagtgagtggggctctgtgtcaaa tgccagctttgattagatgtggataattgatcaccccttcctccttccct ctctcctcccttccgccttacatttaaatcttttggaaccttgacccaga tatgagtcaggcgggggtgggaggtaggtgagaatggttatctttcaaga gctgaggtgtggccagcagagtggaaaacgttgcataaggggtagcgaga caggatgctgctcagtgggcattctggaggcccagcaagagaatgtgggc ttagaaaacatcttcagttacagcaagtatgctaaaagaatttgtatgtg acttcagcagacacccactctgtggaatgaatgaggttagagacaaaagg gcctctctagtgcagaggtggggcacacagtagtgatgtcaggtgccaga aatctgggatatggtggggccttt	gaattcactaatggttctcactgccattagtacatatatgtcaaggtaaa tatgcagaaatgtgcccatttgcaagcagctaatctgttcataaatgatc agattatgactcaaattgggctgcatcttaaaagagggcaataagtaaca catctactgagttatctctgatttattaagaaaactataagattatatgc aaaaccacttgctagccatccctaccactttatgttcctggttcaggcaa gaaacacacagcagacagtcacaaagtcatgtggctggtttaagtaccta ctttctagtatgttgggttattacagcaagacacaatgatggttctagta gaggggtacttggatgctggggctacacacaagtaaaaagcatatggcct gcctggggaaacctagaaaatattgcagtttgggttgtttttaaatattt ttaatttgttctttgaaaactcatactttgatcatatctgtcacccttct tataaatgcgacattgactcaggtcttgaaggatgactaaaggttacaaa catacagagaccaaaggtcagagaacaaaaataaagacaaaatgtgcctc atagcttgaaagtgtatctacgtggctacaaagcaagggagtcctgtggg cagggggtactgtgctggagagccagagaaaggccagccatccagagctt cagtgttccactgatattcttaggttggttttgtttatttctaatagaca atgaaaggcattgaagggttgactcgtgtgtaatcagaagaaagacccac cagggctgagagctttagtgctatgcctttataatgggtaaaagtaggct ttatgtgagcaatgtgtttgttatctctgatcataagcaattaccctgaa ggctcaattactgataattttcagagttgggaagtgctgagctggaaact ctatgataaacgcagagattttttttcactaaaggctagctacacttgga tcatagtcagtctatttacatgtatatgatgtttatttgtcttaacataa attataggtatgattcttagagatatgtgggatcatctcttcccttt
quality values	Open. Hide. 61 47 25 30 61 43 28 61 35 61 43 61 61 61 61 61 47 61 40 43 43 61 61 61 61 47 10 17 13 10 17 15 13 18 13 13 41 55 59 59 61 61 59 59 59 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 55 55 35 34 59 59 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 59 61 59 59 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 61 59 59 61 52 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 59 59 61 61 59 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 55 55 61 47 61 61 61 55 50 61 61 61 61 61 61 55 61 61 55 50 61 53 53 61 61 50 61 61 61 61 61 61 53 61 53 61 47 61 61 61 61 45 61 61 47 61 47 43 47 39 39 32 45 45 61 42 50 50 53 61 50 50 61 53 61 35 61 50 61 61 53 47 50 52 45 37 21 31 9 19 20 27 47 45 53 52 47 47 61 39 40 50 34 50 45 53 61 61 35 61 45 37 33 47 34 39 34 47 38 52 43 45 27 57 35 47 31 34 15 19 11 24 28 20 9 28 46 47 53 47 43 47 34 32 35 43 43 50 18 31 19 19 23 24 17 27 17 13 10 32 17 47 45 21 39 30 43 32 29 28 42 32 43 21 32 16 24 14 30 10 26 23 30 37 39 13 10 8 8 8 10 9 17 33 34 45 41 33 35 36 28 17 14 17 27 30 33 15 37 31 26 53 41 26 17 33 33 38 31 30 41 33 36 21 23 16 12 28 28 16 37 24 32 25 42 30 42 38 52 45 41 52 39 12 14 10 15 8 9 20 34 18 31 37 18 47 10 30 38 18 31 14 24 25 17 28 15 19 17 34 15 10 21 14 13 12 19 25 17 14 19 37 35 9 7 22 10 7 18 24 33 20 23 24 17 21 12 13 8 10 11 8 6 37 27 23 10 10 8 8 11 8 37 16 25 14 13 8 8 22 39 44 29 35 16 22 30 23 10 10 13 7 15 15 30 31 23 24 11 11 11 14 10 6	Open. Hide. 61 61 49 49 61 16 14 24 18 12 12 21 28 22 18 44 59 59 61 61 61 61 61 61 59 49 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 44 61 61 61 61 61 61 61 59 59 52 34 35 36 28 28 61 61 61 61 61 61 61 61 61 59 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 52 61 55 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 53 61 61 39 61 61 61 61 61 61 61 61 61 45 53 61 61 50 61 61 61 53 61 53 53 53 53 57 53 47 47 53 52 53 53 53 57 53 53 57 50 57 53 57 53 53 57 57 57 57 53 50 57 57 53 53 53 50 45 57 57 57 52 57 52 53 53 53 53 53 53 53 57 47 53 57 53 57 57 57 57 53 50 57 45 50 53 52 53 52 47 42 53 53 47 47 53 39 47 45 52 57 53 53 53 52 47 46 47 57 38 50 45 53 53 53 50 57 57 47 45 45 43 46 46 57 53 45 33 38 44 53 50 53 47 53 53 57 57 39 52 34 37 46 50 37 57 24 41 57 52 37 46 16 46 37 50 50 38 28 52 37 46 25 50 52 27 53 53 41 38 27 53 57 57 57 38 30 37 36 33 52 52 52 37 44 52 39 40 37 34 36 27 52 21 35 53 45 35 57 57 47 52 18 37 37 40 33 57 41 37 37 33 51 48 41 33 47 33 24 44 32 43 40 57 40 30 57 15 29 17 37 37 32 48 21 46 32 30 38 32 31 24 32 33 34 24 46 39 48 32 32 38 39 36 36 30 46 44 21 47 51 41 30 26 12 39 30 24 30 19 17 29 45 34 20 36 29 47 29 48 27 33 29 46 25 29 28 20 29 24 29 27 29 32 17 37 29 41 43 29 29 32 17 26 30 46 46 28 39 51 51 30 27 28 13 13 16 25 28 51 22 29 29 30 29 28 36 24 29 18 12 15 43 28 38 29 51 28 30 26 21 12 29 33 38 29 29 28 23 16 25 21 28 14 38 24 29 32 9 10 36 23 31 23 19 24 35 27 14 25 17 8 31 24 36 15 19 28 25 28 28 29 36 17 21 21 32 51 51 22 19 32 7 27 15 22 23 21 38 28 12 22 17 18 32 23 35 28 32 13 27 35 15 11 25 35 23 8 5 17 18 14 18 19 29 17 8 33 20 14 18 28 18 15 38 19 26 23 39 44 44 44 44 44 33 25 7 16 12 28 31 11 14 20 18 30 23 3 4 6 16 22 10 13 14 14 28 18 11 14 31 14 10 23 15 13 14 18 3 3 5 5 8 12 31 23 6 17 12 15 24 3 4 2 6 7 12 14 21 14 15 30 16 12 10 29 8 15 6 16 14 22 11 10 8 4 5 24 27 14 10 14 8 9 16 13 23 4 3 9 11 13 5 4 9 10 25 9 5 12 3 14 4 11 4 10 6 5 18 13 21 5 11 13 11 5 9 4 8 6 8 19 10 3 24 14

Alignment Information

BAC End 1

BAC End 2

seq1: chr12_5416143_5417016
seq2: B6Ng01-115M21.b_47_920

seq1  GAATTCACACAATAGAGTATCATTTAGCAATAAAAAAATGAAGTGTTGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACACAATAGAGTATCATTTAGCAATAAAAAAATGAAGTGTTGAT  50

seq1  ACATATTACAACATCGATGGACCCTGAAACATACCGGGAACAAAGCCAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATTACAACATCGATGGACCCTGAAACATACCGGGAACAAAGCCAGT  100

seq1  GATGTAGGATGCTGGGCTATGCTGCAGAGTCGGAAGTAGACAGAAAGTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTAGGATGCTGGGCTATGCTGCAGAGTCGGAAGTAGACAGAAAGTAG  150

seq1  ATTACTCCTAGCCTTGGGCTGTGGAGTTTGGAGGGAATTTGGAGTGACTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTCCTAGCCTTGGGCTGTGGAGTTTGGAGGGAATTTGGAGTGACTG  200

seq1  CTAATGGATGTGGCATTTCTATTTGGGGTAATGAAAATGTTCTAAAATGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGGATGTGGCATTTCTATTTGGGGTAATGAAAATGTTCTAAAATGG  250

seq1  ATGGTAGTGATAGATGTTCAACTTTTTGCATATACTAAAAAGTACAGAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTAGTGATAGATGTTCAACTTTTTGCATATACTAAAAAGTACAGAAT  300

seq1  TATATTTTCAGTGGGTGGATTCTAATGGTATGTGAATTATATTTCAATAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTTCAGTGGGTGGATTCTAATGGTATGTGAATTATATTTCAATAA  350

seq1  AGCTGTTCAAATTAATTAATTTATTGAATTAATGTGAAAGCAGCCTGGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTTCAAATTAATTAATTTATTGAATTAATGTGAAAGCAGCCTGGCT  400

seq1  CTCTGATGACAGCATGACTGAGCAGGGAGTGAGTGGGGCTCTGTGTCAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGATGACAGCATGACTGAGCAGGGAGTGAGTGGGGCTCTGTGTCAAA  450

seq1  TGCCAGCTTTGATTAGATGTGGATAATTGATCACCCCTTCCTCCTTCCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGCTTTGATTAGATGTGGATAATTGATCACCCCTTCCTCCTTCCCT  500

seq1  CTCTCCTCCCTTCCGCCTTACATTTAAATCTTTTGGAACCTTGACCCAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCTCCCTTCCGCCTTACATTTAAATCTTTTGGAACCTTGACCCAGA  550

seq1  TATGAGTCAGGCGGGGGTGGGAGGTAGGTGAGAATGGTTATCTTTCAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGTCAGGCGGGGGTGGGAGGTAGGTGAGAATGGTTATCTTTCAAGA  600

seq1  GCTGAGGTGTGGCCAGCAGAGTGGAAAACGTTGCATAAGGGGTAGCGAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGGTGTGGCCAGCAGAGTGGAAAACGTTGCATAAGGGGTAGCGAGA  650

seq1  CAGGATGCTGCTCAGTGGGCATTCTGGAGGCCCAGCAAGAGAATGTGGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATGCTGCTCAGTGGGCATTCTGGAGGCCCAGCAAGAGAATGTGGGC  700

seq1  TTAG-AAACATCTTCAGTCACAGCAAGTATGCTAAAAGAATTTGTATGTG  749
      |||| ||||||||||||| |||||||||||||||||||||||||||||||
seq2  TTAGAAAACATCTTCAGTTACAGCAAGTATGCTAAAAGAATTTGTATGTG  750

seq1  ACTTCAGCAGACACCCACTCTGTGG-ATGAATGAGGTTAGAGACAAAAGG  798
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  ACTTCAGCAGACACCCACTCTGTGGAATGAATGAGGTTAGAGACAAAAGG  800

seq1  GCCTCTCTAGTGCAGAGGTGGGGCACACAGCAGTGATGTACAGGTGCCAG  848
      |||||||||||||||||||||||||||||| |||||||| ||||||||||
seq2  GCCTCTCTAGTGCAGAGGTGGGGCACACAGTAGTGATGT-CAGGTGCCAG  849

seq1  AAATCTGGGATATGGGTGGGGCCTTT  874
      ||||||||||||| ||||||||||||
seq2  AAATCTGGGATAT-GGTGGGGCCTTT  874

seq1: chr12_5508805_5509922
seq2: B6Ng01-115M21.g_69_1165 (reverse)

seq1  AAAGGGGGAGAGATGATTCCACATTATCTCTAAAGACATCATACCTATAA  50
       || ||| ||||||||| ||||| ||||||| |||| |||||||||||||
seq2  -AAAGGGAAGAGATGATCCCACA-TATCTCT-AAGA-ATCATACCTATAA  46

seq1  ATTTTATGTTAAAGACAAATAAAACAATCATATTTACATGTAAATAGAAC  100
        |||||||| ||||||||||||   ||||||  ||||||||||||| ||
seq2  --TTTATGTT-AAGACAAATAAA--CATCATA--TACATGTAAATAG-AC  88

seq1  TGACTATGATCCAAGTGTAGGCTAGCCTTTAGGTGAAAAAAAATCTCTGC  150
      ||||||||||||||||||| ||||||||||| ||||||||||||||||||
seq2  TGACTATGATCCAAGTGTA-GCTAGCCTTTA-GTGAAAAAAAATCTCTGC  136

seq1  GTTTATCATAGAGGTTTTCCAGCTCAGCACTTCCCAACTCTTGAAAATTA  200
      |||||||||||||  ||||||||||||||||||||||||| |||||||||
seq2  GTTTATCATAGAG--TTTCCAGCTCAGCACTTCCCAACTC-TGAAAATTA  183

seq1  TTCAGTAATTTGAGCCTTCAGGGTAATTGCTTATGATCAGAGATAAACAA  250
       ||||||| ||||||||||||||||||||||||||||||||||| |||||
seq2  -TCAGTAA-TTGAGCCTTCAGGGTAATTGCTTATGATCAGAGAT-AACAA  230

seq1  ACACATTTGCTCACATAAAGCCTACTTTTACCCATTATAAAGGCATAGCA  300
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACA-TTGCTCACATAAAGCCTACTTTTACCCATTATAAAGGCATAGCA  279

seq1  CTAAAGCTCTCAGCCCTGGTGGGTCTTTCTTCTGATTACACACGAGTCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGCTCTCAGCCCTGGTGGGTCTTTCTTCTGATTACACACGAGTCAA  329

seq1  CCCTTCAATGCCTTTCATTGTCTATTAGAAATAAACAAAACCAACCTAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTCAATGCCTTTCATTGTCTATTAGAAATAAACAAAACCAACCTAAG  379

seq1  AATATCAGTGGAACACTGAAGCTCTGGATGGCTGGCCTTTCTCTGGCTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCAGTGGAACACTGAAGCTCTGGATGGCTGGCCTTTCTCTGGCTCT  429

seq1  CCAGCACAGTACCCCCTGCCCACAGGACTCCCTTGCTTTGTAGCCACGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCACAGTACCCCCTGCCCACAGGACTCCCTTGCTTTGTAGCCACGTA  479

seq1  GATACACTTTCAAGCTATGAGGCACATTTTGTCTTTATTTTTGTTCTCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACACTTTCAAGCTATGAGGCACATTTTGTCTTTATTTTTGTTCTCTG  529

seq1  ACCTTTGGTCTCTGTATGTTTGTAACCTTTAGTCATCCTTCAAGACCTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTGGTCTCTGTATGTTTGTAACCTTTAGTCATCCTTCAAGACCTGA  579

seq1  GTCAATGTCGCATTTATAAGAAGGGTGACAGATATGATCAAAGTATGAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAATGTCGCATTTATAAGAAGGGTGACAGATATGATCAAAGTATGAGT  629

seq1  TTTCAAAGAACAAATTAAAAATATTTAAAAACAACCCAAACTGCAATATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAAGAACAAATTAAAAATATTTAAAAACAACCCAAACTGCAATATT  679

seq1  TTCTAGGTTTCCCCAGGCAGGCCATATGCTTTTTACTTGTGTGTAGCCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGGTTTCCCCAGGCAGGCCATATGCTTTTTACTTGTGTGTAGCCCC  729

seq1  AGCATCCAAGTACCCCTCTACTAGAACCATCATTGTGTCTTGCTGTAATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCCAAGTACCCCTCTACTAGAACCATCATTGTGTCTTGCTGTAATA  779

seq1  ACCCAACATACTAGAAAGTAGGTACTTAAACCAGCCACATGACTTTGTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAACATACTAGAAAGTAGGTACTTAAACCAGCCACATGACTTTGTGA  829

seq1  CTGTCTGCTGTGTGTTTCTTGCCTGAACCAGGAACATAAAGTGGTAGGGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTGCTGTGTGTTTCTTGCCTGAACCAGGAACATAAAGTGGTAGGGA  879

seq1  TGGCTAGCAAGTGGTTTTGCATATAATCTTATAGTTTTCTTAATAAATCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTAGCAAGTGGTTTTGCATATAATCTTATAGTTTTCTTAATAAATCA  929

seq1  GAGATAACTCAGTAGATGTGTTACTTATTGCCCTCTTTTAAGATGCAGCC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATAACTCAGTAGATGTGTTACTTATTGCCCTCTTTTAAGATGCAGCC  979

seq1  CAATTTGAGTCATAATCTGATCATTTATGAACAGATTAGCTGCTTGCAAA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTGAGTCATAATCTGATCATTTATGAACAGATTAGCTGCTTGCAAA  1029

seq1  TGGGCACATTTCTGCATATTTACCTTGACATATATGTACTAATGGCAGTG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCACATTTCTGCATATTTACCTTGACATATATGTACTAATGGCAGTG  1079

seq1  AGAACCATTAGTGAATTC  1118
      ||||||||||||||||||
seq2  AGAACCATTAGTGAATTC  1097

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Alignment Information