BAC Information

Click to search

BAC

Clone NameB6Ng01-116G14
Chromosome12 (Build37)
Map Location 69,377,372 - 69,378,352
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040745, LOC100040681
Downstream geneLOC100040696, LOC665967, LOC665973, Rps29, Ppil5, Rpl36al, Mgat2, 1110034A24Rik, 9330151L19Rik, Pole2, Klhdc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-116G14.bB6Ng01-116G14.g
ACCDH921416DH921417
length980692
definitionDH921416|Mus musculus domesticus DNA, BAC clone: B6Ng01-116G14, 5' end.DH921417|Mus musculus domesticus DNA, BAC clone: B6Ng01-116G14, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatatatattttaattttttaaaaattttatttaatctttttct
tacactccagattttatcccctcccagtccaccttctgagtgttccacat
cccgtactttccccttcccccatcttcacaaggatgtcccctcccttccc
acccccctccctactagacctccctatgccctgggacctccagtctcttg
aggattaggtgcatcttctctgactgaatacagacctgtcagtcctctgc
tgcacgtgtgttgggggcctcacatcagctggtgtgtgctgtctggttgg
tggtccagtgtttgagagatctcggggatccaggttaattgagactgctg
tttattcacttcacattccgattgcagcaaccctctctcctcctctccca
gtgccttccttaattcttatttagtagatcactaactaaaacaaagagaa
attctaatatgaattcttcacacagtaaaaaaaaaaaaaaggaaaacaat
ttcttcaggaatgctgagaaaaagacagaaataaccctggtgacattaaa
aacacaaaaggaatctgttgcctgtttcccaaataccaatgcctaaacag
tggtgagggcttaagttctatcttaagtccatagagagatggagtggatt
ttgagggaggagccctgatctgtttaaatgcataagagtaagcttctatc
cagaggaacttgaggaacagttccctctgaggcttcttcatcatgcaaaa
aagtagcacaagtctcctcatgttcactatgggaggcagaagatgtctaa
ggaggcagtaatgtcaatgcagatgggcctatagaagctgcccaggtatt
tgtaaactgcagatgctgactggagacttctgtgaaaccggagacttcac
tggcacttgctgcatctcagcattacttaactcctccctagcattcagaa
gtcttttttttatttgtttgtttggttttt

gaattccagggaggggtaggtgatctttaccttaattggttgattttata
tctagagacagtccagaaccattgttgggggatggggagactagaaacat
tgttggggaagcctggaaactcttgctgacccattgcccttgcctcaggc
caggtggtggggtaattactaatggtggggcagtttctgattggttacct
aaggcctgggatttttccagtaactgacttgcctagacttgcccagttct
tggaaacagagatctaggcctagtctcctgaattgccaatttgaagctgg
acacagagtcagcctgtctcagtcctattgatagtacataatgttattaa
ctgttgaggtaatttagctttgaaaaagtgtcaaatggttactctgatgc
aaaatttaattcaactcttcagaaataaatgatcgttctaaataaccgtt
caaactgtgagcttacttagagtatgccatttttgttttttgaatcttga
ctgatatatcctctttgttcacaagagaaaagacagcttattatttttat
agtcagcattatgttttcagtaataatttttgaagccactttttcagaat
ctaagcatggataatttctttttcctttgttatttttcatgttatatata
tatatatatatatatatatatatatatatatatatatatata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_69377372_69378352
seq2: B6Ng01-116G14.b_43_1022

seq1  GAATTCCATATATATTTTAATTTTTTAAAAATTTTATTTAATCTTTTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATATATATTTTAATTTTTTAAAAATTTTATTTAATCTTTTTCT  50

seq1  TACACTCCAGATTTTATCCCCTCCCAGTCCACCTTCTGAGTGTTCCACAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACTCCAGATTTTATCCCCTCCCAGTCCACCTTCTGAGTGTTCCACAT  100

seq1  CCCGTACTTTCCCCTTCCCCCATCTTCACAAGGATGTCCCCTCCCTTCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGTACTTTCCCCTTCCCCCATCTTCACAAGGATGTCCCCTCCCTTCCC  150

seq1  ACCCCCCTCCCTACTAGACCTCCCTATGCCCTGGGACCTCCAGTCTCTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCCCTCCCTACTAGACCTCCCTATGCCCTGGGACCTCCAGTCTCTTG  200

seq1  AGGATTAGGTGCATCTTCTCTGACTGAATACAGACCTGTCAGTCCTCTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTAGGTGCATCTTCTCTGACTGAATACAGACCTGTCAGTCCTCTGC  250

seq1  TGCACGTGTGTTGGGGGCCTCACATCAGCTGGTGTGTGCTGTCTGGTTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACGTGTGTTGGGGGCCTCACATCAGCTGGTGTGTGCTGTCTGGTTGG  300

seq1  TGGTCCAGTGTTTGAGAGATCTCGGGGATCCAGGTTAATTGAGACTGCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCCAGTGTTTGAGAGATCTCGGGGATCCAGGTTAATTGAGACTGCTG  350

seq1  TTTATTCACTTCACATTCCGATTGCAGCAACCCTCTCTCCTCCTCTCCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTCACTTCACATTCCGATTGCAGCAACCCTCTCTCCTCCTCTCCCA  400

seq1  GTGCCTTCCTTAATTCTTATTTAGTAGATCACTAACTAAAACAAAGAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCTTCCTTAATTCTTATTTAGTAGATCACTAACTAAAACAAAGAGAA  450

seq1  ATTCTAATATGAATTCTTCACACAGTAAAAAAAAAAAAAAGGAAAACAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTAATATGAATTCTTCACACAGTAAAAAAAAAAAAAAGGAAAACAAT  500

seq1  TTCTTCAGGAATGCTGAGAAAAAGACAGAAATAACCCTGGTGACATTAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCAGGAATGCTGAGAAAAAGACAGAAATAACCCTGGTGACATTAAA  550

seq1  AACACAAAAGGAATCTGTTGCCTGTTTCCCAAATACCAATGCCTAAACAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAAAAGGAATCTGTTGCCTGTTTCCCAAATACCAATGCCTAAACAG  600

seq1  TGGTGAGGGCTTAAGTTCTATCTTAAGTCCATAGAGAGATGGAGTGGATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGAGGGCTTAAGTTCTATCTTAAGTCCATAGAGAGATGGAGTGGATT  650

seq1  TTGAGGGAGGAGCCCTGATCTGTTTAAATGCATAAGAGTAAGCTTCTATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGGAGGAGCCCTGATCTGTTTAAATGCATAAGAGTAAGCTTCTATC  700

seq1  CAGAGGAACTTGAGGAACAGTTCCCTCTGAGGCTTCTTCATCATGCAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGAACTTGAGGAACAGTTCCCTCTGAGGCTTCTTCATCATGCAAAA  750

seq1  AAGTAGCACAAGTCTCCTCATGTTCACTAT-GGAGGCAGAAGATGTCTAA  799
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  AAGTAGCACAAGTCTCCTCATGTTCACTATGGGAGGCAGAAGATGTCTAA  800

seq1  GGAGGCAGTAATGTCAATGCAGATGGGCCTATAGAAGCTGCCCAGGTATT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCAGTAATGTCAATGCAGATGGGCCTATAGAAGCTGCCCAGGTATT  850

seq1  TGTAAACTGCAGATGCTGACTGGAGACTTCTGTGATACCGGAGAC-TCAC  898
      ||||||||||||||||||||||||||||||||||| ||||||||| ||||
seq2  TGTAAACTGCAGATGCTGACTGGAGACTTCTGTGAAACCGGAGACTTCAC  900

seq1  TGGCACCTGCTGCATCTCAGCATTACTTAACTCCTCCCTAGCATTCAGAA  948
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCACTTGCTGCATCTCAGCATTACTTAACTCCTCCCTAGCATTCAGAA  950

seq1  GTTCTTTTTTTTTATTTGTTTTGTTTTGTTTTT  981
      ||   ||||||||||||| ||||||| ||||||
seq2  GT--CTTTTTTTTATTTG-TTTGTTTGGTTTTT  980


| Home | SequenceCutter | Blast | Download |