BAC Information

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BAC

Clone NameB6Ng01-116K12
Chromosome12 (Build37)
Map Location 40,050,201 - 40,051,283
singlet/doubletsinglet
Overlap genenone
Upstream geneDgkb, LOC668824, LOC100043142, Etv1, LOC100043145
Downstream geneLOC100043148, Arl4a, LOC100043606, Scin, Gm889, Ifrd1, EG629820, Zfp277
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-116K12.bB6Ng01-116K12.g
ACCDH921601DH921602
length1,1601,082
definitionDH921601|Mus musculus domesticus DNA, BAC clone: B6Ng01-116K12, 5' end.DH921602|Mus musculus domesticus DNA, BAC clone: B6Ng01-116K12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcacagaagcacctgaaaaaatg
ttcaatatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatccgtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatcgatacagaaaatgtggtgcatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaattgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccacaatc
agcatccaaacactgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgtcggggcctagcaaac
ccagaagtggatgcccacagtcagctaatggatggatcacagggctccca
atggaggagctagaggaagtacccaagagctaaaggatctgcaaccctat
aggtggaacacattatgactaccagtaccccggagctctgactctagctg
catatgtatcaaagatggcctagtcgccatcactgcaagagagccatgaa
cgcaactttatatgctcagtacaggacccaggccaaaaggggagtgtggt
ggtagggaat
gaattcctcagttgctttcaagaaactgagacatgtgatatttcttttct
taaacagcaagaacaaaacatttattttatcccattatttattaagaatt
ttatacaagaatattctgtttacacaatttgtgctcctttctcaaaaaca
aacaaacaaacaaacaaacaaacaaaaagaaagaaaaaaaacaaagcaga
taaaggtgagattcacatgcacagaagtttagaatctaatttaagttgta
agcaagaatataacttgtagtttctagttttacttctatcaggttgcctt
aaaattcccttttagagtcacaaattttaataatatagctttttttccaa
caaggaacaatttaaatgactatacatgagtgaattttatttaaatagct
atttaatgtatcattaaaagtaactctgttaatcttataatgacctttgg
gggaatatcttaaatattaattacatattacataattataaactaattaa
catattagagaaagacaaggaaccaggaaatgaaggggaaaaaaagagga
agaaaaaacccccaagatttgaacagaatgtaggtgatttatagatgcca
tgaggagttattttgtctaatttgtctccactaatctattcatgttcatt
aataatggattgttaaaattccattttgaaataagtagatataattttat
agcctaaaggcatgtatatatgtgcacatatataatatttacgtgtatat
atgtatattcataatattaccataaaacaccttgaaatgtgaatggacat
agtagatatttatacacatatatgtgattgttcatatatatgatatacaa
atatatgggcatcacacgcaaacaaatgtatacacaggaatgctcacaca
cacatggttccatgcgtttgaaagtggagtaaattctcaataaagtggag
tacattctcaataaagaattcttcaggattcaaccatagaatggagacac
gatgcacaggcgatctggagcagtgcaatttcattcttgggatcagttgt
agaagcaaaccctgtggccatgagccttcagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_40050201_40051283
seq2: B6Ng01-116K12.g_70_1151

seq1  GAATTCCTCAGTTGCTTTCAAGAAACTGAGACATGTGATATTTCTTTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCAGTTGCTTTCAAGAAACTGAGACATGTGATATTTCTTTTCT  50

seq1  TAAACAGCAAGAACAAAACATTTATTTTATCCCATTATTTATTAAGAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACAGCAAGAACAAAACATTTATTTTATCCCATTATTTATTAAGAATT  100

seq1  TTATACAAGAATATTCTGTTTACACAATTTGTGCTCCTTTCTCAAAAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATACAAGAATATTCTGTTTACACAATTTGTGCTCCTTTCTCAAAAACA  150

seq1  AACAAACAAACAAACAAACAAACAAAAAGAAAGAAAAAAAACAAAGCAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAACAAACAAACAAACAAACAAAAAGAAAGAAAAAAAACAAAGCAGA  200

seq1  TAAAGGTGAGATTCACATGCACAGAAGTTTAGAATCTAATTTAAGTTGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGTGAGATTCACATGCACAGAAGTTTAGAATCTAATTTAAGTTGTA  250

seq1  AGCAAGAATATAACTTGTAGTTTCTAGTTTTACTTCTATCAGGTTGCCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGAATATAACTTGTAGTTTCTAGTTTTACTTCTATCAGGTTGCCTT  300

seq1  AAAATTCCCTTTTAGAGTCACAAATTTTAATAATATAGCTTTTTTTCCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTCCCTTTTAGAGTCACAAATTTTAATAATATAGCTTTTTTTCCAA  350

seq1  CAAGGAACAATTTAAATGACTATACATGAGTGAATTTTATTTAAATAGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGAACAATTTAAATGACTATACATGAGTGAATTTTATTTAAATAGCT  400

seq1  ATTTAATGTATCATTAAAAGTAACTCTGTTAATCTTATAATGACCTTTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAATGTATCATTAAAAGTAACTCTGTTAATCTTATAATGACCTTTGG  450

seq1  GGGAATATCTTAAATATTAATTACATATTACATAATTATAAACTAATTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAATATCTTAAATATTAATTACATATTACATAATTATAAACTAATTAA  500

seq1  CATATTAGAGAAAGACAAGGAACCAGGAAATGAAGGGGAAAAAAAGAGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTAGAGAAAGACAAGGAACCAGGAAATGAAGGGGAAAAAAAGAGGA  550

seq1  AGAAAAAACCCCCAAGATTTGAACAGAATGTAGGTGATTTATAGATGCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAAACCCCCAAGATTTGAACAGAATGTAGGTGATTTATAGATGCCA  600

seq1  TGAGGAGTTATTTTGTCTAATTTGTCTCCACTAATCTATTCATGTTCATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGAGTTATTTTGTCTAATTTGTCTCCACTAATCTATTCATGTTCATT  650

seq1  AATAATGGATTGTTAAAATTCCATTTTGAAATAAGTAGATATAATTTTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATGGATTGTTAAAATTCCATTTTGAAATAAGTAGATATAATTTTAT  700

seq1  AGCCTAAAGGCATGTATATATGTGCACATATATAATATTTACGTGTATAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTAAAGGCATGTATATATGTGCACATATATAATATTTACGTGTATAT  750

seq1  ATGTATATTCATAATATTACCATAAAACACCTTGAAATGTGAATGGACAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATATTCATAATATTACCATAAAACACCTTGAAATGTGAATGGACAT  800

seq1  AGTAGATATTTATACACATATATGTGATTGTTCATATATATGATATACAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGATATTTATACACATATATGTGATTGTTCATATATATGATATACAA  850

seq1  ATATATGGGCATCACACGCAAACAAATGTATACACAGGAATGCTCACACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATGGGCATCACACGCAAACAAATGTATACACAGGAATGCTCACACA  900

seq1  CACATGGTTCCATGCGTTTGAAAGTGGAGTAAATTCTCAATAAAGTGGAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGGTTCCATGCGTTTGAAAGTGGAGTAAATTCTCAATAAAGTGGAG  950

seq1  TACATTCTCAATAAAGAATTCTTCAGGATTCAACCATAGAATGGAGACAC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTCTCAATAAAGAATTCTTCAGGATTCAACCATAGAATGGAGACAC  1000

seq1  GATGCACA-GCGATCTGGAGCAGTGCAATCTCATTC-TGGGATCCAGGTT  1048
      |||||||| |||||||||||||||||||| |||||| |||||||   |||
seq2  GATGCACAGGCGATCTGGAGCAGTGCAATTTCATTCTTGGGATC--AGTT  1048

seq1  GTAGAAGGCAAACCCTGTGGCCATGAGCCTTCAGT  1083
      |||||| ||||||||||||||||||||||||||||
seq2  GTAGAA-GCAAACCCTGTGGCCATGAGCCTTCAGT  1082