BAC Information

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BAC

Clone NameB6Ng01-116P02
Chromosome12 (Build37)
Map Location 95,868,535 - 95,869,746
singlet/doubletsinglet
Overlap genenone
Upstream gene2610022K04Rik-ps, EG633639
Downstream geneLOC217786, LOC100039603
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-116P02.bB6Ng01-116P02.g
ACCDH921813DH921814
length9911,192
definitionDH921813|Mus musculus domesticus DNA, BAC clone: B6Ng01-116P02, 5' end.DH921814|Mus musculus domesticus DNA, BAC clone: B6Ng01-116P02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaacagagatccaattagcagctttgccctactgactatcactc
acggtaatgaaactttccttcatgccaaatgaagaaaaagctaaccacca
ggaaaatcattctatagacaatgttacctacagcagtgaccaccatgaga
gatatgctggtgcattagaggcacagatgttactctagtaagaaacctct
ttttgcttggcttcaaggcctactagatgaaatggagcccatgcctgacg
tgctaaagtggctaaaaatctgaaactagataggctgtgggcccaggggg
aaaatctactactactcttctcctaaaggaacccagcaataaacagactt
ctaatgaaatattgctattccatattctgtccattgattaacccatttca
gagaagcttcttgcaaactatgaaaattaacagacagccccacagcttta
aactgtgcagagtatgagagtctttggagtgttctttctaaagttaatgc
ttcatcaaatccttcacatcaagaatctaggatccatgcagaagaatagc
cagagtgcaatggttaggggtgatggataacttccaggaaacagtgtgtg
tcttctagaaacaacaggactcatgaactcagagtgaatatggcagaatt
tacaaggcctgtacatggtcgagtcatagcacctccccactatgtgagag
acagacatagcacccaaccattaaccaataatttatttactattgatact
ggttagcaaatagaaaatcattttttcccccagtagagtgtcactgagta
tagccaacaaaatatgagaaaaggttacatacctaaagggttgaccaaca
aaaatgaatgaaaactgtgttttttgggtttatttatttatttattattt
agttagtgtgtgtgtgtgtgtgtgcgtgcgcgcgcgtgcgtgtgtctgtc
tagtttctggctttttttcttgtttatttgcttgtctaatt

gaattccaaagtctattgcatttgtactgcttctctttgtataatgtttc
tgggattgttttagggattagaaaacaaaaacattatttttcacatattt
cttgatcagtgttttattacttcaaatgccattatagtattctaacaaat
gacctgtcccactatttctgtgtactttaagaactctgtgagaaaagaga
tttgatttcaacctttaaggaactcagacaattacttgtgctaaataggt
taccctttcatcatccacaagcacttctccagtctctgaagttgaaactt
cattctggaattctcatccattttaagaaattgtctggcagtacttgtag
agtagtattgcccacagtaagttaacttctttcacataatattacattat
ttaacctttatttctgaagtatttgtgtttcaggatattgatttcccaca
ctttaattccacattacacttttttttaactatcatgccatttcgatctg
agttgtgctttctgatgataaaatctggcattcaaatgatatctgccttg
gttctctcatctgaccatatctgccttggttctcttgctgttttaaaggg
aatccccgattgtctatgtttaatcaatttgtttatgatgtggtgagcat
tttatttaaaacattgattaaatattccaacttatgacttacttacttaa
tcctctgtagctattttctgagtggaaagtttcccatttttagtaaaatt
gcaaatacctgaacacaagattaggaacttttttctgcaattcccaggac
acagagcagataattggtaagagaacacccatcagaactagggactgtca
gtacaccaagagaatgtatgtcggcctcggcccagagtacagcaatgata
tacctttaactgaactcccagtggcctggagtaatattttacattaaacc
aggcagccaagtactgatggctggaaagataggcagcttagagagaacca
agctcaagtagacagaaaacattcccatagaatagagcttttttcttgct
ataaacaagattagttttgcttagaccttcaaagaacttcagactgacta
ctgattcaacagactcaactgggccttgggtccatttataagcatggcca
tcagttccctcaggatttccagacactcgcccgtggacacat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_95868535_95869746
seq2: B6Ng01-116P02.g_66_1257 (reverse)

seq1  ATGTGTCCAC-GGCGA-TGTCTGGGAATCACTGAAAGGAAATGGATTGGC  48
      |||||||||| ||||| ||||||| |||| ||| | |||| ||   ||||
seq2  ATGTGTCCACGGGCGAGTGTCTGGAAATC-CTG-AGGGAACTG--ATGGC  46

seq1  CTATTTGCTTTACAAATTGAAACCCAAGTGGCCAGTGTGATGTCTGTTTT  98
      |    ||| ||| |||| |  ||||||| | ||||| ||| |||||  ||
seq2  C---ATGC-TTATAAATGG--ACCCAAG-GCCCAGT-TGA-GTCTG--TT  85

seq1  GTATCTGTAGTCAGTCTTGAAGTCTTTTGAAGTTCTAAGCAAAAACTAAT  148
      | ||| |||||||||| ||||||  ||||||| ||||||| |||||||| 
seq2  GAATCAGTAGTCAGTC-TGAAGTTCTTTGAAGGTCTAAGC-AAAACTAA-  132

seq1  TCTTGTTTAATAGCAAG-AAAAAGCTCTATTCTAATGGGAATGTTCTCTG  197
      |||||||| |||||||| ||||||||||||||| ||||||||||| ||||
seq2  TCTTGTTT-ATAGCAAGAAAAAAGCTCTATTCT-ATGGGAATGTTTTCTG  180

seq1  TCTACTTGAGCTTGGTTCTCTCTTAAGCTGCCCTATCTTTCCAGCCATCA  247
      |||||||||||||||||||||| ||||||| |||||||||||||||||||
seq2  TCTACTTGAGCTTGGTTCTCTC-TAAGCTG-CCTATCTTTCCAGCCATCA  228

seq1  GTACTTGGCTGCCTGGTTTAATGTAAAATATTTACTCCAGGCCACTGGGA  297
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GTACTTGGCTGCCTGGTTTAATGTAAAATA-TTACTCCAGGCCACTGGGA  277

seq1  GTTCAGTTAAAGGTATATCATTGCTGTACTCTGGGCCGAGGCCGACATAC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAGTTAAAGGTATATCATTGCTGTACTCTGGGCCGAGGCCGACATAC  327

seq1  ATTCTCTTGGTGTACTGACAGTCCCTAGTTCTGATGGGTGTTCTCTTACC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCTTGGTGTACTGACAGTCCCTAGTTCTGATGGGTGTTCTCTTACC  377

seq1  AATTATCTGCTCTGTGTCCTGGGAATTGCAGAAAAAAGTTCCTAATCTTG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATCTGCTCTGTGTCCTGGGAATTGCAGAAAAAAGTTCCTAATCTTG  427

seq1  TGTTCAGGTATTTGCAATTTTACTAAAAATGGGAAACTTTCCACTCAGAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCAGGTATTTGCAATTTTACTAAAAATGGGAAACTTTCCACTCAGAA  477

seq1  AATAGCTACAGAGGATTAAGTAAGTAAGTCATAAGTTGGAATATTTAATC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGCTACAGAGGATTAAGTAAGTAAGTCATAAGTTGGAATATTTAATC  527

seq1  AATGTTTTAAATAAAATGCTCACCACATCATAAACAAATTGATTAAACAT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTTTAAATAAAATGCTCACCACATCATAAACAAATTGATTAAACAT  577

seq1  AGACAATCGGGGATTCCCTTTAAAACAGCAAGAGAACCAAGGCAGATATG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAATCGGGGATTCCCTTTAAAACAGCAAGAGAACCAAGGCAGATATG  627

seq1  GTCAGATGAGAGAACCAAGGCAGATATCATTTGAATGCCAGATTTTATCA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGATGAGAGAACCAAGGCAGATATCATTTGAATGCCAGATTTTATCA  677

seq1  TCAGAAAGCACAACTCAGATCGAAATGGCATGATAGTTAAAAAAAAGTGT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAAGCACAACTCAGATCGAAATGGCATGATAGTTAAAAAAAAGTGT  727

seq1  AATGTGGAATTAAAGTGTGGGAAATCAATATCCTGAAACACAAATACTTC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGGAATTAAAGTGTGGGAAATCAATATCCTGAAACACAAATACTTC  777

seq1  AGAAATAAAGGTTAAATAATGTAATATTATGTGAAAGAAGTTAACTTACT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATAAAGGTTAAATAATGTAATATTATGTGAAAGAAGTTAACTTACT  827

seq1  GTGGGCAATACTACTCTACAAGTACTGCCAGACAATTTCTTAAAATGGAT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGCAATACTACTCTACAAGTACTGCCAGACAATTTCTTAAAATGGAT  877

seq1  GAGAATTCCAGAATGAAGTTTCAACTTCAGAGACTGGAGAAGTGCTTGTG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATTCCAGAATGAAGTTTCAACTTCAGAGACTGGAGAAGTGCTTGTG  927

seq1  GATGATGAAAGGGTAACCTATTTAGCACAAGTAATTGTCTGAGTTCCTTA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATGAAAGGGTAACCTATTTAGCACAAGTAATTGTCTGAGTTCCTTA  977

seq1  AAGGTTGAAATCAAATCTCTTTTCTCACAGAGTTCTTAAAGTACACAGAA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTGAAATCAAATCTCTTTTCTCACAGAGTTCTTAAAGTACACAGAA  1027

seq1  ATAGTGGGACAGGTCATTTGTTAGAATACTATAATGGCATTTGAAGTAAT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGGGACAGGTCATTTGTTAGAATACTATAATGGCATTTGAAGTAAT  1077

seq1  AAAACACTGATCAAGAAATATGTGAAAAATAATGTTTTTGTTTTCTAATC  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACACTGATCAAGAAATATGTGAAAAATAATGTTTTTGTTTTCTAATC  1127

seq1  CCTAAAACAATCCCAGAAACATTATACAAAGAGAAGCAGTACAAATGCAA  1197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAAACAATCCCAGAAACATTATACAAAGAGAAGCAGTACAAATGCAA  1177

seq1  TAGACTTTGGAATTC  1212
      |||||||||||||||
seq2  TAGACTTTGGAATTC  1192


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