BAC Information

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BAC

Clone NameB6Ng01-117E02
Chromosome12 (Build37)
Map Location 19,444,565 - 19,445,587
singlet/doubletsinglet
Overlap genenone
Upstream gene5730507C01Rik, EG668553, LOC668558, LOC100042641, LOC668568, LOC668570, EG668413, LOC671401, EG546524, EG668584, EG544848
Downstream geneEG627871, LOC100042698, LOC629055, EG668588, LOC100042706, EG668594, EG668600, LOC100042727, LOC673301, EG668605, LOC668614, LOC100042751, LOC100043371, EG668455
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-117E02.bB6Ng01-117E02.g
ACCDH922040DH922041
length1,0231,191
definitionDH922040|Mus musculus domesticus DNA, BAC clone: B6Ng01-117E02, 5' end.DH922041|Mus musculus domesticus DNA, BAC clone: B6Ng01-117E02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccagggccactccatgttagaaactggggtcctccttagcatctc
cttctatgtccacttagaacaatgattctcaatcttcctaatgctgccac
cctttaatacagttcctcatgttgtggtgacctccagccaaaaaattatt
taacttgctacttcataactgtaattttgctgctattatgaattctaata
taaatatttttggagatagaggtgtgccaaaaagtcataaccctcaggat
gagaactgataaatctgccttgctccagttggggcttgtttctccatctt
tagacctggcaagagttcaggctcttgacaattgtcatcttgagcaattg
acactgagaatagacccaaagtccagatctatcatcctggccaggagcct
ttcccggcagaaaaatcacctggcattgcaccctgtgggccgggcacctg
ccttacagggtagccctatggtggatacagggtttgtcttcgtaggtaat
gtcctcctcttttgtggaaattttagataaactcagtgtctgaagacatg
aagatttaaggagagcttcagaatgacagacaatcagtctctagagagac
caggttctatctggtcagaaccaactagccaaacccgatcctctggttcc
agagccagggctggctccaaaagtccactcagaacctctcaggcattagg
caccagataagaggcctggagcaagcttccaaggaagcaggtggctatgt
gataggggagtttggagttttaaggacattttgtacctcagctgttcttc
tcaaccacgactaggacctgtgtgagcccacaagtcacacaacttcccaa
acctctgctcttcctttgtgaagtgagactaactaaacacatgcagtact
aaaatgcctcctctgggggagacaaaatagtatagttccctccaggtctc
catgtcaaatggaaacaagatttgccgaagtcattctgtaagccaatgag
tttattgagcttccatagagaac
gaattcaccgccataaatcaaaccatggattccacctgcacctctcagag
ccctcccccagctgctcccatgcaagtgagtgggtcagcacagtgccctt
gctttttgccctaagaagcagtcgctgcaccggctctgagattgctaaag
gcacagcctgaggactgaggacctgcagttgggacccggagccaacaagc
ccagagtcccccagcagatgaaactcctgacaccacttctgccttttcct
ttgcgagctgtgggcaacctgcccacagacaggcagtctctgcagaccct
ccaatattggcctttctcatcggctgatctgtacaattggaacgctgggt
tccctctggaccggccagattagaactacaacacggctcaaggaaaggag
aggttgactgtttaccggccgggctctagtctaaagggagcgatgagaca
ccccaccaatttggttaaggtaagagaagtgatgcagggccctacagagc
ccccatttgtttttctagaaagcaaaaagcaaacggagatgccagaccta
aaagattggttgactgctttccccagagcatgggcagagactggaggcat
gggaatggctttcagagttcccctgtggtcgtgggactgaaaacggatgc
aacccctataggagtgcgacaatacccaatgagccatgaagcaagagatg
gaatcaggccacatattcagagactattacaattaggtattttggtaact
tgccagtcaccctggaatactcctttactgccggtaaagaaacctggcac
gagtgactactgaccagtccaagacccgagagaggtcaataagagggttc
aagatattcaccaactgttcctaatccctataacctcctcagctcactcc
tccggagcgaaaatggtacatagtatttggatgaaaagatgcttttcttt
ttcctgaagtaacatccctccagccagcccatctctcagcttttgagtgg
agagatcttgacactggacaaatggacatgactgaccgtacttcaggtca
aactcccacccttttgatgagcttaatgggattagctcttcacgaaactt
ccggaatactctgcttcaaatggtgatgacattctgtccacccaggaagg
atatgctgcaggtaacaaatattgtctagacgaacctgatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_19444565_19445587
seq2: B6Ng01-117E02.b_46_1068

seq1  GAATTCCAGGGCCACTCCATGTTAGAAACTGGGGTCCTCCTTAGCATCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGGCCACTCCATGTTAGAAACTGGGGTCCTCCTTAGCATCTC  50

seq1  CTTCTATGTCCACTTAGAACAATGATTCTCAATCTTCCTAATGCTGCCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTATGTCCACTTAGAACAATGATTCTCAATCTTCCTAATGCTGCCAC  100

seq1  CCTTTAATACAGTTCCTCATGTTGTGGTGACCTCCAGCCAAAAAATTATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAATACAGTTCCTCATGTTGTGGTGACCTCCAGCCAAAAAATTATT  150

seq1  TAACTTGCTACTTCATAACTGTAATTTTGCTGCTATTATGAATTCTAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTGCTACTTCATAACTGTAATTTTGCTGCTATTATGAATTCTAATA  200

seq1  TAAATATTTTTGGAGATAGAGGTGTGCCAAAAAGTCATAACCCTCAGGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATATTTTTGGAGATAGAGGTGTGCCAAAAAGTCATAACCCTCAGGAT  250

seq1  GAGAACTGATAAATCTGCCTTGCTCCAGTTGGGGCTTGTTTCTCCATCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACTGATAAATCTGCCTTGCTCCAGTTGGGGCTTGTTTCTCCATCTT  300

seq1  TAGACCTGGCAAGAGTTCAGGCTCTTGACAATTGTCATCTTGAGCAATTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACCTGGCAAGAGTTCAGGCTCTTGACAATTGTCATCTTGAGCAATTG  350

seq1  ACACTGAGAATAGACCCAAAGTCCAGATCTATCATCCTGGCCAGGAGCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGAGAATAGACCCAAAGTCCAGATCTATCATCCTGGCCAGGAGCCT  400

seq1  TTCCCGGCAGAAAAATCACCTGGCATTGCACCCTGTGGGCCGGGCACCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCGGCAGAAAAATCACCTGGCATTGCACCCTGTGGGCCGGGCACCTG  450

seq1  CCTTACAGGGTAGCCCTATGGTGGATACAGGGTTTGTCTTCGTAGGTAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTACAGGGTAGCCCTATGGTGGATACAGGGTTTGTCTTCGTAGGTAAT  500

seq1  GTCCTCCTCTTTTGTGGAAATTTTAGATAAACTCAGTGTCTGAAGACATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTCCTCTTTTGTGGAAATTTTAGATAAACTCAGTGTCTGAAGACATG  550

seq1  AAGATTTAAGGAGAGCTTCAGAATGACAGACAATCAGTCTCTAGAGAGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTTAAGGAGAGCTTCAGAATGACAGACAATCAGTCTCTAGAGAGAC  600

seq1  CAGGTTCTATCTGGTCAGAACCAACTAGCCAAACCCGATCCTCTGGTTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTCTATCTGGTCAGAACCAACTAGCCAAACCCGATCCTCTGGTTCC  650

seq1  AGAGCCAGGGCTGGCTCCAAAAGTCCACTCAGAACCTCTCAGGCATTAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCAGGGCTGGCTCCAAAAGTCCACTCAGAACCTCTCAGGCATTAGG  700

seq1  CACCAGATAAGAGGCCTGGAGCAAGCTTCCAAGGAAGCAGGTGGCTATGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGATAAGAGGCCTGGAGCAAGCTTCCAAGGAAGCAGGTGGCTATGT  750

seq1  GATAGGGGAGTTTGGAG-TTTAAGGACATTTTGTACCTCAGCTGTTCTTC  799
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GATAGGGGAGTTTGGAGTTTTAAGGACATTTTGTACCTCAGCTGTTCTTC  800

seq1  TCAACCACGACTAGGACCTGTGTGAGCCCACAAGTCACACAACTTCCCAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACCACGACTAGGACCTGTGTGAGCCCACAAGTCACACAACTTCCCAA  850

seq1  ACCTCTGCTCTTCCTTTGTGAAGTGAGACTAACTAAACACATGCAGTACT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCTGCTCTTCCTTTGTGAAGTGAGACTAACTAAACACATGCAGTACT  900

seq1  AAAATGCCTCCTCT-GGGGAGACAAAATAGTATAGTTCCCTCCAGGTCTC  948
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AAAATGCCTCCTCTGGGGGAGACAAAATAGTATAGTTCCCTCCAGGTCTC  950

seq1  CATGTCAAATGGAAACAAGATTTGCCGAAGTTCATTCTGTAAAGCCAATG  998
      |||||||||||||||||||||||||||||| ||||||||| |||||||||
seq2  CATGTCAAATGGAAACAAGATTTGCCGAAG-TCATTCTGT-AAGCCAATG  998

seq1  AGTTTATTGAGCTTCCATAGAGAAC  1023
      |||||||||||||||||||||||||
seq2  AGTTTATTGAGCTTCCATAGAGAAC  1023