BAC Information

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BAC

Clone NameB6Ng01-117O13
Chromosome12 (Build37)11 (Build37)
Map Location 64,954,612 - 64,955,43020,842,134 - 20,842,461
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG665741, EG382606
Downstream geneLOC435302, EG623046, LOC623123, LOC217645
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-117O13.bB6Ng01-117O13.g
ACCDH922525DH922526
length819758
definitionDH922525|Mus musculus domesticus DNA, BAC clone: B6Ng01-117O13, 5' end.DH922526|Mus musculus domesticus DNA, BAC clone: B6Ng01-117O13, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(64,954,612 - 64,955,430)(20,842,134 - 20,842,461)
sequence
gaattccagcagctcagaaaaaaaatgccaagaattcacaaatgaagttt
catgcaattaaagagctccttttctgcattagaagtaaaacttcaaccta
tatagtagggaaaattttccattttccattttccatctcacgcctgagaa
aaaaattaacatttagaataaagaattaaagataaacaaacaaaagacag
tccctaaactccacaacatcccataaattggctaatgaaataaacaaata
attcccaaaagatgaaaacaatatgttatcttcttttatgtgcttattaa
tatatatctgatagacatgtctaataagcatattaaaatttaattattag
ccattatggaaatgcaaattaaaactgtactggctttatatttcatcata
tcaaacaagttatcattaagataataaattactgtttcagaaaaaaggca
tttgtatgctctcctccagggtcagtgacattttagccactggtagttag
ctaggtttacagtaccaggaatgaattcctacatctagagtgggtcttaa
gtccaattagatagctgttggctaccctaaatattatgtgccaatattgc
acatagagatatcttggtattctggccattgcaattcataggctttgaaa
cttggtagtaccccagagctcttgactctagctgcatatggatcaaaaga
tagcctagtcggccatcactggaaaaagaggcccattggacatgcaaact
ttatatgccccagtacaggggaatgccagggccaaaaaaatgggaatggg
tgggtagggaagtgggggg
gaattctttgtttagctctgttctccgtttttaatggagttatttgaatt
tctggaggatagcttcttgagctctttgtatatattggatatttgtcccc
catcagatttaggattggtaaaaatcctttcccaatctgttggtggcctt
tttgtcttattgacagtgtcttttgtcttacagaagctttgcagtttgca
aaataatcaagaagagggaagaccaatgggtggatacttagttcctactt
agaatagggaacaaaatacccatgaaagaagttacagagacaatgtttgg
agccaagaaaaaaggctggactatcaagagactacccaaccctgagatcc
atcccataatcagccaccaaacccagacactattgcatatgccagcaaga
ttttgctgaaaggaccctggtatagctgtctcatatgaggctatgctagt
gtatttgctagtggcaaatacagaagtggatgctcacagtcatctataag
atggaacacagtgctccagtggagaagttagagaaagtacccaaggagct
gaaggggtctgcaaccctataggtggaagaacaatatgaactaaccagta
cccccagagcttgtgtttctagctgcatatgtatcagaagatggcctagt
cggccatcactgggaagagaggccccttggtcttgcaaactttatatgcc
ccagtacaggggaatgccagggccaagaacctggggtgggtgggtagggg
agcagggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_64954612_64955430
seq2: B6Ng01-117O13.b_46_864

seq1  GAATTCCAGCAGCTCAGAAAAAAAATGCCAAGAATTCACAAATGAAGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGCAGCTCAGAAAAAAAATGCCAAGAATTCACAAATGAAGTTT  50

seq1  CATGCAATTAAAGAGCTCCTTTTCTGCATTAGAAGTAAAACTTCAACCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCAATTAAAGAGCTCCTTTTCTGCATTAGAAGTAAAACTTCAACCTA  100

seq1  TATAGTAGGGAAAATTTTCCATTTTCCATTTTCCATCTCACGCCTGAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTAGGGAAAATTTTCCATTTTCCATTTTCCATCTCACGCCTGAGAA  150

seq1  AAAAATTAACATTTAGAATAAAGAATTAAAGATAAACAAACAAAAGACAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTAACATTTAGAATAAAGAATTAAAGATAAACAAACAAAAGACAG  200

seq1  TCCCTAAACTCCACAACATCCCATAAATTGGCTAATGAAATAAACAAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTAAACTCCACAACATCCCATAAATTGGCTAATGAAATAAACAAATA  250

seq1  ATTCCCAAAAGATGAAAACAATATGTTATCTTCTTTTATGTGCTTATTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCAAAAGATGAAAACAATATGTTATCTTCTTTTATGTGCTTATTAA  300

seq1  TATATATCTGATAGACATGTCTAATAAGCATATTAAAATTTAATTATTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATCTGATAGACATGTCTAATAAGCATATTAAAATTTAATTATTAG  350

seq1  CCATTATGGAAATGCAAATTAAAACTGTACTGGCTTTATATTTCATCATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTATGGAAATGCAAATTAAAACTGTACTGGCTTTATATTTCATCATA  400

seq1  TCAAACAAGTTATCATTAAGATAATAAATTACTGTTTCAGAAAAAAGGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACAAGTTATCATTAAGATAATAAATTACTGTTTCAGAAAAAAGGCA  450

seq1  TTTGTATGCTCTCCTCCAGGGTCAGTGACATTTTAGCCACTGGTAGTTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTATGCTCTCCTCCAGGGTCAGTGACATTTTAGCCACTGGTAGTTAG  500

seq1  CTAGGTTTACAGTACCAGGAATGAATTCCTACATCTAGAGTGGGTCTTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGTTTACAGTACCAGGAATGAATTCCTACATCTAGAGTGGGTCTTAA  550

seq1  GTCCAATTAGATAGCTGTTGGCTACCCTAAATATTATGTGCCAATATTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAATTAGATAGCTGTTGGCTACCCTAAATATTATGTGCCAATATTGC  600

seq1  ACATAGAGATATCTTGGTATTCTGGCCATTGCAATTCATAGGCTTTGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGAGATATCTTGGTATTCTGGCCATTGCAATTCATAGGCTTTGAAA  650

seq1  CTTGGTAGTACCCCAGAGCTCTTGACTCTAGCTGCATATGGATCAAAAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTAGTACCCCAGAGCTCTTGACTCTAGCTGCATATGGATCAAAAGA  700

seq1  TAGCCTAGTCGGCCATCACTGGAAAAAGAGGCCCATTGGACATGCAAACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTAGTCGGCCATCACTGGAAAAAGAGGCCCATTGGACATGCAAACT  750

seq1  TTATATGCCCCAGTACAGGGGAATGCCAGGGCCAAAAAAATGGGAATGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATGCCCCAGTACAGGGGAATGCCAGGGCCAAAAAAATGGGAATGGG  800

seq1  TGGGTAGGGAAGTGGGGGG  819
      |||||||||||||||||||
seq2  TGGGTAGGGAAGTGGGGGG  819

seq1: chr11_20842134_20842461
seq2: B6Ng01-117O13.g_491_822 (reverse)

seq1  CCCTGCTCCCCTACCCACCCACTCCTGCTTCTTGGCCCTGGCATTCTCCT  50
      |||||||||||||||||||||| || | |||||||||||||||||| |||
seq2  CCCTGCTCCCCTACCCACCCACCCCAGGTTCTTGGCCCTGGCATTCCCCT  50

seq1  GTACTGGGGCATATAAAGTTTGCAAGACCAAGGGGCCTCTCTTCCCAGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTGGGGCATATAAAGTTTGCAAGACCAAGGGGCCTCTCTTCCCAGTG  100

seq1  ATGGCCGACTAGGACATCTTCTAATACATATGATGCAACTAGAGACACGA  150
      ||||||||||||| |||||||| ||||||   ||||| ||||| |||| |
seq2  ATGGCCGACTAGGCCATCTTCTGATACAT---ATGCAGCTAGAAACACAA  147

seq1  GCTCTGGGGGTACTGGTTAGTTCATATTGTTGTTCCACCTATAGAGTTGC  200
      ||||||||||||||||||||||||||||||| |||||||||||| |||||
seq2  GCTCTGGGGGTACTGGTTAGTTCATATTGTTCTTCCACCTATAGGGTTGC  197

seq1  AGACCCCTTCAGCTCCTTGGGTGCTTTCTCTAGCTTCTCCATTGGGGACC  250
      |||||||||||||||||||||| ||||||||| |||||||| ||| | | 
seq2  AGACCCCTTCAGCTCCTTGGGTACTTTCTCTAACTTCTCCACTGGAG-CA  246

seq1  CTGTGTTCCATCTTATAGATGACTGTGAGCATCCACTTCTGTATTTGCC-  299
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CTGTGTTCCATCTTATAGATGACTGTGAGCATCCACTTCTGTATTTGCCA  296

seq1  -------AGGCACTGGCATAGCCTCATACGAGACAG  328
             |  |||| ||||||||||||| |||||||
seq2  CTAGCAAATACACTAGCATAGCCTCATATGAGACAG  332