BAC Information

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BAC

Clone NameB6Ng01-117P07
Chromosome12 (Build37)
Map Location 7,244,753 - 7,246,007
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC238049, LOC100042118
Downstream geneLOC668380, EG668388, Apob, 1110057K04Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-117P07.bB6Ng01-117P07.g
ACCDH922561DH922562
length1,232818
definitionDH922561|Mus musculus domesticus DNA, BAC clone: B6Ng01-117P07, 5' end.DH922562|Mus musculus domesticus DNA, BAC clone: B6Ng01-117P07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattgtccattcttgagatgtatacagtaagtggacaaggcatgg
ggacaaggcatggggatgaacccaacacctaggtgacagaaagatgatca
ctctgagttcatggccagcctggactacatattaaaaccctatctcaaaa
caacaaaatagcacagggaaagccaaacagtccacttcttcaacaaaagc
tcctgtcttgagaactatcctaaaaccttccttttcctcttgcttcatta
tcatctcaaaagtcagggttttgtctgaacatgtgccctgaatatctgca
ggatctgagtgactaggttattcctaatctcatgacactgacaggttaga
taaaagtcctgggtcctgtaagtgaccttggttcctgatgatctgattca
tggtgaatttaaatacagagaaaacatacttttgggtccatatacccaga
aatttgccaaggcatcttgcttcctctttctaactttgaggatatttttc
tctccatgttcattataattgttgaaagccttaggcagggacagtggttt
tctgggctaagtggtacaccttctagacttccccactgacaacaaaattt
ctctgtcaaacatcccttcatcttgttacaaataagactggtggatggga
cctgcccagggaacaatcagcatgctggtggttgctttgaaagcagtatt
acactaatacagtttctcattagaacacctttgctgggagctagaggttt
ctttccaatccaaatggaagatggtcctgttcattatgtgttcagaagag
ctacttccctgtgctgtaaaacggcctgaggagagagcatcttttgacct
ttgtaattgctacaatattatgtgctgtactttctccatttgtacagggc
agtaaatattgcagatctgtgcttttcttttagcctaaaatgcaattaaa
atacataatttttttctgaagtaatttcagtgatgccccactacctaacg
tcagggagtagtatttgagagagactgtctttcaggtggcatgagtcagg
tcatttgagataatttcagctactagctgggggctaagtgcagatagctc
aaccaggggtctggctctgtcgactcattaagacgtcttgtcaggatggt
atggatacctttggactgcaagcctagccataatgctgaacgttgcctta
agaagttaattacaatctgggtgccatgtggt

gaattctggaaagtcttccttgatccagtgaccgtttagtagagagttgt
ttaattaccataaatatgtaggctttctgttgtataagtccagcttaaat
tcatgatgatctgataagatgcatggggttatttcaatcttcttgtatct
gttgaggcttgctttgtgaccaattaaaaggttaaattagacaaggttcc
atgaagtactgagaagaaagtatattgttttgtttgggtgaaatgttcta
tagatatttgttaggtccattagaatcataacttctcttagttttgttat
tcttctctttagtttgtgtctctgtgaccgtgacctgtccattggtggga
gtggggtgttgaactctcacactattaatgtgtggggttcaatgtgtgtt
ttaaactctagtaatatttcctttacaaatgtgggtgcccttgcatttgg
aacatgggttttcagaattgagatgtccacttggtagaattgtcctttga
tgtgtatgaagtttcctttcctttctcttttgattgcttttagttgaaag
tcctacttgatgagatattagaatggctactccaacttgtttcttgggtc
tatttgcttcaaaaatctattttccatacctttacactgagataatgact
attttggggactgagatgagcaggatgatggattctgtttaacacatcca
ttctgtcagcctatgtgtttttattgggcaattgagtccattaatgtcga
gagatattaacgaccaatgattgtcactttcatgttatttttgatagtag
tggttgggttgtttttgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_7244753_7246007
seq2: B6Ng01-117P07.b_47_1278

seq1  GAATTCATTGTCCATTCTTGAGATGTATACAGTAAGTGGACAAGGCATGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGTCCATTCTTGAGATGTATACAGTAAGTGGACAAGGCATGG  50

seq1  GGACAAGGCATGGGGATGAACCCAACACCTAGGTGACAGAAAGATGATCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAAGGCATGGGGATGAACCCAACACCTAGGTGACAGAAAGATGATCA  100

seq1  CTCTGAGTTCATGGCCAGCCTGGACTACATATTAAAACCCTATCTCAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAGTTCATGGCCAGCCTGGACTACATATTAAAACCCTATCTCAAAA  150

seq1  CAACAAAATAGCACAGGGAAAGCCAAACAGTCCACTTCTTCAACAAAAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAAATAGCACAGGGAAAGCCAAACAGTCCACTTCTTCAACAAAAGC  200

seq1  TCCTGTCTTGAGAACTATCCTAAAACCTTCCTTTTCCTCTTGCTTCATTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTCTTGAGAACTATCCTAAAACCTTCCTTTTCCTCTTGCTTCATTA  250

seq1  TCATCTCAAAAGTCAGGGTTTTGTCTGAACATGTGCCCTGAATATCTGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTCAAAAGTCAGGGTTTTGTCTGAACATGTGCCCTGAATATCTGCA  300

seq1  GGATCTGAGTGACTAGGTTATTCCTAATCTCATGACACTGACAGGTTAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTGAGTGACTAGGTTATTCCTAATCTCATGACACTGACAGGTTAGA  350

seq1  TAAAAGTCCTGGGTCCTGTAAGTGACCTTGGTTCCTGATGATCTGATTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGTCCTGGGTCCTGTAAGTGACCTTGGTTCCTGATGATCTGATTCA  400

seq1  TGGTGAATTTAAATACAGAGAAAACATACTTTTGGGTCCATATACCCAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGAATTTAAATACAGAGAAAACATACTTTTGGGTCCATATACCCAGA  450

seq1  AATTTGCCAAGGCATCTTGCTTCCTCTTTCTAACTTTGAGGATATTTTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGCCAAGGCATCTTGCTTCCTCTTTCTAACTTTGAGGATATTTTTC  500

seq1  TCTCCATGTTCATTATAATTGTTGAAAGCCTTAGGCAGGGACAGTGGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCATGTTCATTATAATTGTTGAAAGCCTTAGGCAGGGACAGTGGTTT  550

seq1  TCTGGGCTAAGTGGTACACCTTCTAGACTTCCCCACTGACAACAAAATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGCTAAGTGGTACACCTTCTAGACTTCCCCACTGACAACAAAATTT  600

seq1  CTCTGTCAAACATCCCTTCATCTTGTTACAAATAAGACTGGTGGATGGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTCAAACATCCCTTCATCTTGTTACAAATAAGACTGGTGGATGGGA  650

seq1  CCTGCCCAGGGAACAATCAGCATGCTGGTGGTTGCTTTGAAAGCAGTATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCCAGGGAACAATCAGCATGCTGGTGGTTGCTTTGAAAGCAGTATT  700

seq1  ACACTAATACAGTTTCTCATTAGAACACCTTTGCTGGGAGCTAGAGGTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTAATACAGTTTCTCATTAGAACACCTTTGCTGGGAGCTAGAGGTTT  750

seq1  CTTTCCAATCCAAATGGAAGATGGTCCTGTTCATTATGTGTTCAGAAGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCAATCCAAATGGAAGATGGTCCTGTTCATTATGTGTTCAGAAGAG  800

seq1  CTACTTCCCTGTGCTGTAAAACGGCCTGAGGAGAGAGCATCTTTTGACCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTCCCTGTGCTGTAAAACGGCCTGAGGAGAGAGCATCTTTTGACCT  850

seq1  TTGTAATTGCTACAATATTATGTGCTGTACTTTCTCCATTTGTACAGGGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAATTGCTACAATATTATGTGCTGTACTTTCTCCATTTGTACAGGGC  900

seq1  AGTAAATATTGCAGATCTGTGCTTTTCTTTTTAGCCTAAAATGCAATTAA  950
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  AGTAAATATTGCAGATCTGTGCTTTTC-TTTTAGCCTAAAATGCAATTAA  949

seq1  AATACATAATTTTTTTCTGAAGTAATTTCAGTGATGCCCCACTACCTAAC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACATAATTTTTTTCTGAAGTAATTTCAGTGATGCCCCACTACCTAAC  999

seq1  GTCAGGAAGTAGTATTTGAAGAGAGACTGTCTTTCAGGTGGCATGAGTCA  1050
      |||||| ||||||||||| |||||||||||||||||||||||||||||||
seq2  GTCAGGGAGTAGTATTTG-AGAGAGACTGTCTTTCAGGTGGCATGAGTCA  1048

seq1  GGGTCCATTTGAGATAATTTCCAGCTACTAGCTGGGGGCCTTAAGTTGCA  1100
      ||   ||||||||||||||| ||||||||||||||||||  |||| ||||
seq2  GG--TCATTTGAGATAATTT-CAGCTACTAGCTGGGGGC--TAAG-TGCA  1092

seq1  GAATTAGCTCAACCAGGGGTCTGGCTCCTGGTTTCAGACTCATTAAGACA  1150
      ||  |||||||||||||||||||||||    | || ||||||||||||| 
seq2  GA--TAGCTCAACCAGGGGTCTGGCTC----TGTC-GACTCATTAAGAC-  1134

seq1  GTCTTGTCAGGGTATGTATATGATCACTTTTGGACTGCAAGCTAAGCCCA  1200
      |||||||||||  |||  ||||   || ||||||||||||||  ||||  
seq2  GTCTTGTCAGG--ATG-GTATGGATACCTTTGGACTGCAAGCCTAGCC--  1179

seq1  ATAAATTGCTGAACTTGGCTTAAAGAAGTTAATTACCAAATCT-GGTG-C  1248
      ||||  |||||||| | || | ||||||||||||||  ||||| |||| |
seq2  ATAA--TGCTGAACGTTGCCTTAAGAAGTTAATTAC--AATCTGGGTGCC  1225

seq1  ATGTGGT  1255
      |||||||
seq2  ATGTGGT  1232


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