BAC Information

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BAC

Clone NameB6Ng01-118P15
Chromosome12 (Build37)
Map Location 67,479,250 - 67,624,063
singlet/doubletdoublet
Overlap geneMdga2
Upstream geneLOC100040700, EG238217
Downstream geneLOC100040745
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-118P15.bB6Ng01-118P15.g
ACCDH923311DH923312
length1,1111,130
definitionDH923311|Mus musculus domesticus DNA, BAC clone: B6Ng01-118P15, 5' end.DH923312|Mus musculus domesticus DNA, BAC clone: B6Ng01-118P15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,622,945 - 67,624,063)(67,479,250 - 67,480,386)
sequence
gaattcacctgttaaaaattgtaactgttttaatgtcatgtgaactttga
ccagtttacatatccaacagggctacatgcttgcaagataaatttttata
gatctgtgcttctgcatgtcatttgtggaaagacacactttgtcatttta
ttatgtccattttaaagttcatatacacagcaaactcccttagagaaaat
ttccctttctgaagtagagggaagatttgatgtccaatgaaataaagata
taaatatgttgggcaagtttggttgctgtcagttatacgacgtaaggatt
ttaaaactcaggatccctcagatgcaccaaggcattgtgctatcaacttg
gtgatttcttatccccttgtgatgtggagctaaaagaaatcaaggctacc
agataacttatcacagatgcctactgcatcataaatcctctacagactga
acatggtccaggctcctgtgtaaatctacaacacctttacggcctcattt
gttagtgaggtgacctcacgctcacttttcttccttgcacataggttctg
acattcttaaagtttcctactcttttatagtggcaccgaactttaatact
gctaaatttttaatgttttattctacctgattatgtgaaataatatgaat
ttaatttctatttcattgactcattgtgaagacttagcttaccctaatta
attagttattggagtttcttcatctgtgaaatagctattatctgagtcat
ttttctactcaactctgtttcttgtttacttataggcatttttaatatat
tcaggttatctctgtgtggaacagttattaaaagttcaggcttacacatc
cctctcaaatgggggatgataatgacagcaaacttttaaaatgtattatt
ttgttaattctttttagagttttgatcacattgtctgctactgctcccac
tatgtgctaaaaaaaaatcactcctacacccaacgcctcccaatgtctta
ccatttttaaaaataatcaacagagtccagtggtctgctatattattaat
gggtgtggtgttgacctacagaactacacctgacaacatcagactctctc
catcactgggt
gaattcttggtagaattctgaacgaaaatcatctggccctgggttttatt
tggttgggagattttttttttctttttcttaattttctttattatttaaa
tgcattttatatatcaaacatattaataatattgagtgttttgagaatca
aataatacataaaaatttgttcagctttgatattcatatcctttcatacc
ttaaaaacattattaatgaatatttaatactacccataacagaagatcct
atagctaattttgaatactaaattgcttcaaaacattaaaaaaattctat
gggagttaagaatagtaaaagagcataaaatattaaaaacgaatactacc
tgacatagtgagaaaatatttaaaacgcattatatatctgtgtacattgt
ctaacaatcagtttacttaaaaaattatcagtgtttctaggaaagaaatt
attttaccagtaagtatattttaaaaatttcaaaatagcaaaaactttga
tgttaaacattaagaaaattctaatttcaagcacaatgagaaaaattatc
aataatatttccatgatgtttgtagaacatgatcttaatattttcaactg
ttgatattcaacaaacagaatagttgttttaagatatatttcgttgttat
gtctctattttcatttctgattttatttatttgggtactgtctctgtgcc
ctctagttagtctgactaagggtttatatatcttgttgattttctcaaag
aactagatcctgattttgttgatttttttttgtatagttctttttgtttc
tatttggtttatttcttgccatctactcttgggtgtattttcttcttttt
gttctagagctttcgtgtgctgtaaagctgttagtgtaagctttcttcag
ttttctttgtggaggcacatagagctatgagttttcctcctaccattgct
ttcataaattttggtatgatgtgtcttcagagggcagcatgctgatgatc
tgtcctggagtaggagtgtagttctaatggaatgggtgggtcctgggtta
ctgggcttctaggagtcccaatttgctgcagttatttgggaggatccctc
acttgttcacctgggtgcagagatgtcttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_67622945_67624063
seq2: B6Ng01-118P15.b_46_1156 (reverse)

seq1  ACCCAGTGATGGGAAGAGAGTCTGATGTTGTTTAAGGTTGTAGTTCCTGG  50
      ||||||||||||  ||||||||||||||||  | ||| ||||||||   |
seq2  ACCCAGTGATGG--AGAGAGTCTGATGTTG--TCAGG-TGTAGTTC--TG  43

seq1  TAGGTCAACACCACACCCATTAAT-ATATAGCCAAGACCAACTGGACTCT  99
      |||||||||||||||||||||||| |||||||  ||||| ||||||||||
seq2  TAGGTCAACACCACACCCATTAATAATATAGC--AGACC-ACTGGACTCT  90

seq1  GTTGATTATTTTT-AAAATGGTAAGACATTGGGAGGCGTTGGGTGTAGGA  148
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GTTGATTATTTTTAAAAATGGTAAGACATTGGGAGGCGTTGGGTGTAGGA  140

seq1  GTGATTTTTTTTTAGCACATAGTGGGAGCAGTAGCAGACAATGTGATCAA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTTTTTTTTAGCACATAGTGGGAGCAGTAGCAGACAATGTGATCAA  190

seq1  AACTCTAAAAAGAATTAACAAAATAATACATTTTAAAAGTTTGCTGTCAT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTAAAAAGAATTAACAAAATAATACATTTTAAAAGTTTGCTGTCAT  240

seq1  TATCATCCCCCATTTGAGAGGGATGTGTAAGCCTGAACTTTTAATAACTG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATCCCCCATTTGAGAGGGATGTGTAAGCCTGAACTTTTAATAACTG  290

seq1  TTCCACACAGAGATAACCTGAATATATTAAAAATGCCTATAAGTAAACAA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACACAGAGATAACCTGAATATATTAAAAATGCCTATAAGTAAACAA  340

seq1  GAAACAGAGTTGAGTAGAAAAATGACTCAGATAATAGCTATTTCACAGAT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAGAGTTGAGTAGAAAAATGACTCAGATAATAGCTATTTCACAGAT  390

seq1  GAAGAAACTCCAATAACTAATTAATTAGGGTAAGCTAAGTCTTCACAATG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAACTCCAATAACTAATTAATTAGGGTAAGCTAAGTCTTCACAATG  440

seq1  AGTCAATGAAATAGAAATTAAATTCATATTATTTCACATAATCAGGTAGA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAATGAAATAGAAATTAAATTCATATTATTTCACATAATCAGGTAGA  490

seq1  ATAAAACATTAAAAATTTAGCAGTATTAAAGTTCGGTGCCACTATAAAAG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAACATTAAAAATTTAGCAGTATTAAAGTTCGGTGCCACTATAAAAG  540

seq1  AGTAGGAAACTTTAAGAATGTCAGAACCTATGTGCAAGGAAGAAAAGTGA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGGAAACTTTAAGAATGTCAGAACCTATGTGCAAGGAAGAAAAGTGA  590

seq1  GCGTGAGGTCACCTCACTAACAAATGAGGCCGTAAAGGTGTTGTAGATTT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTGAGGTCACCTCACTAACAAATGAGGCCGTAAAGGTGTTGTAGATTT  640

seq1  ACACAGGAGCCTGGACCATGTTCAGTCTGTAGAGGATTTATGATGCAGTA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGGAGCCTGGACCATGTTCAGTCTGTAGAGGATTTATGATGCAGTA  690

seq1  GGCATCTGTGATAAGTTATCTGGTAGCCTTGATTTCTTTTAGCTCCACAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATCTGTGATAAGTTATCTGGTAGCCTTGATTTCTTTTAGCTCCACAT  740

seq1  CACAAGGGGATAAGAAATCACCAAGTTGATAGCACAATGCCTTGGTGCAT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGGGGATAAGAAATCACCAAGTTGATAGCACAATGCCTTGGTGCAT  790

seq1  CTGAGGGATCCTGAGTTTTAAAATCCTTACGTCGTATAACTGACAGCAAC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGGATCCTGAGTTTTAAAATCCTTACGTCGTATAACTGACAGCAAC  840

seq1  CAAACTTGCCCAACATATTTATATCTTTATTTCATTGGACATCAAATCTT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTTGCCCAACATATTTATATCTTTATTTCATTGGACATCAAATCTT  890

seq1  CCCTCTACTTCAGAAAGGGAAATTTTCTCTAAGGGAGTTTGCTGTGTATA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTACTTCAGAAAGGGAAATTTTCTCTAAGGGAGTTTGCTGTGTATA  940

seq1  TGAACTTTAAAATGGACATAATAAAATGACAAAGTGTGTCTTTCCACAAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTTTAAAATGGACATAATAAAATGACAAAGTGTGTCTTTCCACAAA  990

seq1  TGACATGCAGAAGCACAGATCTATAAAAATTTATCTTGCAAGCATGTAGC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATGCAGAAGCACAGATCTATAAAAATTTATCTTGCAAGCATGTAGC  1040

seq1  CCTGTTGGATATGTAAACTGGTCAAAGTTCACATGACATTAAAACAGTTA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTGGATATGTAAACTGGTCAAAGTTCACATGACATTAAAACAGTTA  1090

seq1  CAATTTTTAACAGGTGAATTC  1119
      |||||||||||||||||||||
seq2  CAATTTTTAACAGGTGAATTC  1111

seq1: chr12_67479250_67480386
seq2: B6Ng01-118P15.g_69_1198

seq1  GAATTCTTGGTAGAATTCTGAACGAAAATCATCTGGCCCTGGGTTTTATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGGTAGAATTCTGAACGAAAATCATCTGGCCCTGGGTTTTATT  50

seq1  TGGTTGGGAGATTTTTTTTTTCTTTTTCTTAATTTTCTTTATTATTTAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGGGAGATTTTTTTTTTCTTTTTCTTAATTTTCTTTATTATTTAAA  100

seq1  TGCATTTTATATATCAAACATATTAATAATATTGAGTGTTTTGAGAATCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTTTATATATCAAACATATTAATAATATTGAGTGTTTTGAGAATCA  150

seq1  AATAATACATAAAAATTTGTTCAGCTTTGATATTCATATCCTTTCATACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATACATAAAAATTTGTTCAGCTTTGATATTCATATCCTTTCATACC  200

seq1  TTAAAAACATTATTAATGAATATTTAATACTACCCATAACAGAAGATCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAACATTATTAATGAATATTTAATACTACCCATAACAGAAGATCCT  250

seq1  ATAGCTAATTTTGAATACTAAATTGCTTCAAAACATTAAAAAAATTCTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCTAATTTTGAATACTAAATTGCTTCAAAACATTAAAAAAATTCTAT  300

seq1  GGGAGTTAAGAATAGTAAAAGAGCATAAAATATTAAAAACGAATACTACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGTTAAGAATAGTAAAAGAGCATAAAATATTAAAAACGAATACTACC  350

seq1  TGACATAGTGAGAAAATATTTAAAACGCATTATATATCTGTGTACATTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATAGTGAGAAAATATTTAAAACGCATTATATATCTGTGTACATTGT  400

seq1  CTAACAATCAGTTTACTTAAAAAATTATCAGTGTTTCTAGGAAAGAAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACAATCAGTTTACTTAAAAAATTATCAGTGTTTCTAGGAAAGAAATT  450

seq1  ATTTTACCAGTAAGTATATTTTAAAAATTTCAAAATAGCAAAAACTTTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTACCAGTAAGTATATTTTAAAAATTTCAAAATAGCAAAAACTTTGA  500

seq1  TGTTAAACATTAAGAAAATTCTAATTTCAAGCACAATGAGAAAAATTATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAAACATTAAGAAAATTCTAATTTCAAGCACAATGAGAAAAATTATC  550

seq1  AATAATATTTCCATGATGTTTGTAGAACATGATCTTAATATTTTCAACTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATATTTCCATGATGTTTGTAGAACATGATCTTAATATTTTCAACTG  600

seq1  TTGATATTCAACAAACAGAATAGTTGTTTTAAGATATATTTCGTTGTTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATATTCAACAAACAGAATAGTTGTTTTAAGATATATTTCGTTGTTAT  650

seq1  GTCTCTATTTTCATTTCTGATTTTATTTATTTGGGTACTGTCTCTGTGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTATTTTCATTTCTGATTTTATTTATTTGGGTACTGTCTCTGTGCC  700

seq1  CTCTAGTTAGTCTGACTAAGGGTTTATATATCTTGTTGATTTTCTCAAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAGTTAGTCTGACTAAGGGTTTATATATCTTGTTGATTTTCTCAAAG  750

seq1  AACTAGATCCTGATTTTGTTGATTTTTTTTTGTATAGTTCTTTTTGTTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAGATCCTGATTTTGTTGATTTTTTTTTGTATAGTTCTTTTTGTTTC  800

seq1  TATTTGGTTTATTTCTTGCCATCTACTCTTGGGTGTATTTTCTTCTTTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGGTTTATTTCTTGCCATCTACTCTTGGGTGTATTTTCTTCTTTTT  850

seq1  GTTCTAGAGCTTTCGTGTGCTGTAAAGCTGTTAGTGTAAGCTTTCTTCAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTAGAGCTTTCGTGTGCTGTAAAGCTGTTAGTGTAAGCTTTCTTCAG  900

seq1  -TTTCTTTGTGGAGGCACATAGAGCTATGAGTTTTCCTCCTACCATTGCT  949
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTGTGGAGGCACATAGAGCTATGAGTTTTCCTCCTACCATTGCT  950

seq1  TTCATAAATTTTGGTATGATGTGTCTTCAGAGGGGCAGGCATGCTGATGA  999
      ||||||||||||||||||||||||||||||| ||||| ||||||||||||
seq2  TTCATAAATTTTGGTATGATGTGTCTTCAGA-GGGCA-GCATGCTGATGA  998

seq1  TCTGCCCTGGAGGTAAGGGAGGTGTAGTTCTAATGGAATGGGTGGGTCCT  1049
      |||| |||||| |||  ||| |||||||||||||||||||||||||||||
seq2  TCTGTCCTGGA-GTA--GGA-GTGTAGTTCTAATGGAATGGGTGGGTCCT  1044

seq1  GTGTCCACTGGGCTCCTAGGGAGTCCCAA-TTGCTGCAGTTATTTGGGAG  1098
      | ||  |||||||| ||| |||||||||| ||||||||||||||||||||
seq2  GGGT-TACTGGGCTTCTA-GGAGTCCCAATTTGCTGCAGTTATTTGGGAG  1092

seq1  GGTCCCTCACCTGTTCACCTGGGTGCAGAAGATGTCCTG  1137
      | |||||||| ||||||||||||||||| ||||||| ||
seq2  GATCCCTCACTTGTTCACCTGGGTGCAG-AGATGTCTTG  1130