BAC Information

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BAC

Clone NameB6Ng01-120G03
Chromosome12 (Build37)
Map Location 90,136,876 - 90,328,845
singlet/doubletdoublet
Overlap geneNrxn3
Upstream geneLOC100039076, LOC100039087, LOC100039100, LOC100039191, LOC100039203, LOC627873, LOC100039162, LOC627881, LOC100039129, LOC636517, LOC544884, LOC100039226, LOC432715, EG667350, LOC546543, EG667388, LOC627971, LOC667395, LOC100039315, EG638008, EG666862, EG435337, LOC100039154, LOC633093, LOC667440, LOC100039383, EG266459, LOC667475, LOC620915, LOC435314, Adck1, LOC100039261, EG666915
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-120G03.bB6Ng01-120G03.g
ACCDH924341DH924342
length1,121211
definitionDH924341|Mus musculus domesticus DNA, BAC clone: B6Ng01-120G03, 5' end.DH924342|Mus musculus domesticus DNA, BAC clone: B6Ng01-120G03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(90,136,876 - 90,137,995)(90,328,635 - 90,328,845)
sequence
gaattccactgaaggttgagaacatgcctttaaactctccagaaatccct
tgggtaggaatgcttggctttagatgcatgttagagtcctccaggggtct
cagagaattgcctacacctgacctcatcaaagatcccagaatgggcaagt
ctaggttggttaattattatggttttctcagataatcctactccttggcc
aggggtgggaaccatatcgtctcctggttctagtttcatcactcattact
caatacttcttactcctatatacttctagtcttgtcaccaggaaaagaag
tactagttagaaacacagacaccactgactcagtctacccataggcccct
ctttattgttttcagggattttatgaggattattccctgccacagtacac
atcagagcctctcaatcagtgtgtgtagacaagtgtatctgtgtttactt
ctagcaagctgcattaaggattcttttacaggacaaagagaaggagatgc
tgcatttattcaaattccttagggcatatctacctactcatagctcatta
atgcattccaaccagcaccctcccttctccctacattcaagagacattca
cagacatcagctgatacggccattgagagtagagcaagatgctgctgcta
tgtgcttgctttgagtagaggtcttttggggcacttcaaacaccagttct
ttagtgtggactgagccaagcttcttcttttgtgatagctaatattcagt
ggatggtggttcaaagacaagacactgcttgtcacccagtccatgaacct
gctgtgccagtagtttcctctaaagtttgtcttagtgtgctctcaactat
cctttatgactgtggttaactgaggtctaagaacaataaatagaaaattc
cagaaataatactttaaatgacttactctaatatgttattgttgttcagt
tctagtgttagttatcatgtcatctcttactgtgccaaaatgataaattc
taatatgcatattcattttgcatacctggtatgatggaaggaaatttaaa
ttgtattctttaggcatctcagcattgggttgaattatcacaagattgct
agcaaattacctgccatggga
tggcataagaaatatgttaactatcactctaattttcttctaaaacataa
tgaccaccaatgcatattcaccttagcttccttaataatggatatatata
tgtatatatagtgtgtgtgtgtgtgtgtgtgtgagtgtgtgtgtgtgtgt
gtgtgttcaagtgttaagctgcataatagatgcacaggtaggagctacag
gggagaaaata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_90136876_90137995
seq2: B6Ng01-120G03.b_48_1168

seq1  GAATTCCACTGAAGGTTGAGAACATGCCTTTAAACTCTCCAGAAATCCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACTGAAGGTTGAGAACATGCCTTTAAACTCTCCAGAAATCCCT  50

seq1  TGGGTAGGAATGCTTGGCTTTAGATGCATGTTAGAGTCCTCCAGGGGTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTAGGAATGCTTGGCTTTAGATGCATGTTAGAGTCCTCCAGGGGTCT  100

seq1  CAGAGAATTGCCTACACCTGACCTCATCAAAGATCCCAGAATGGGCAAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAATTGCCTACACCTGACCTCATCAAAGATCCCAGAATGGGCAAGT  150

seq1  CTAGGTTGGTTAATTATTATGGTTTTCTCAGATAATCCTACTCCTTGGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGTTGGTTAATTATTATGGTTTTCTCAGATAATCCTACTCCTTGGCC  200

seq1  AGGGGTGGGAACCATATCGTCTCCTGGTTCTAGTTTCATCACTCATTACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGTGGGAACCATATCGTCTCCTGGTTCTAGTTTCATCACTCATTACT  250

seq1  CAATACTTCTTACTCCTATATACTTCTAGTCTTGTCACCAGGAAAAGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATACTTCTTACTCCTATATACTTCTAGTCTTGTCACCAGGAAAAGAAG  300

seq1  TACTAGTTAGAAACACAGACACCACTGACTCAGTCTACCCATAGGCCCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAGTTAGAAACACAGACACCACTGACTCAGTCTACCCATAGGCCCCT  350

seq1  CTTTATTGTTTTCAGGGATTTTATGAGGATTATTCCCTGCCACAGTACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATTGTTTTCAGGGATTTTATGAGGATTATTCCCTGCCACAGTACAC  400

seq1  ATCAGAGCCTCTCAATCAGTGTGTGTAGACAAGTGTATCTGTGTTTACTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAGCCTCTCAATCAGTGTGTGTAGACAAGTGTATCTGTGTTTACTT  450

seq1  CTAGCAAGCTGCATTAAGGATTCTTTTACAGGACAAAGAGAAGGAGATGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCAAGCTGCATTAAGGATTCTTTTACAGGACAAAGAGAAGGAGATGC  500

seq1  TGCATTTATTCAAATTCCTTAGGGCATATCTACCTACTCATAGCTCATTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTTATTCAAATTCCTTAGGGCATATCTACCTACTCATAGCTCATTA  550

seq1  ATGCATTCCAACCAGCACCCTCCCTTCTCCCTACATTCAAGAGACATTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATTCCAACCAGCACCCTCCCTTCTCCCTACATTCAAGAGACATTCA  600

seq1  CAGACATCAGCTGATACGGCCATTGAGAGTAGAGCAAGATGCTGCTGCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACATCAGCTGATACGGCCATTGAGAGTAGAGCAAGATGCTGCTGCTA  650

seq1  TGTGCTTGCTTTGAGTAGAGGTCTTTTGGGGCACTTCAAACACCAGTTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTTGCTTTGAGTAGAGGTCTTTTGGGGCACTTCAAACACCAGTTCT  700

seq1  TTAGTGTGGACTGAGCCAAGCTTCTTCTTTTGTGATAGCTAATATTCAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGTGGACTGAGCCAAGCTTCTTCTTTTGTGATAGCTAATATTCAGT  750

seq1  GGATGGTGGTTCAAAGACAAGACACTGCTTGTCACCCAGTCCATGAACCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGTGGTTCAAAGACAAGACACTGCTTGTCACCCAGTCCATGAACCT  800

seq1  GCTGTGCCAGTAGTTTCCTCTAAGGTTTGTCTTAGTGTGCTCTCAACTAT  850
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GCTGTGCCAGTAGTTTCCTCTAAAGTTTGTCTTAGTGTGCTCTCAACTAT  850

seq1  CCTTTATGACTGTGGTTAACTGAGGTCTAAGAACAATAAATAGAAAATTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTATGACTGTGGTTAACTGAGGTCTAAGAACAATAAATAGAAAATTC  900

seq1  CAGAAATAATACTTTAAATGACTTACTCTAATATGTTATTGTTGTTCAGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAATAATACTTTAAATGACTTACTCTAATATGTTATTGTTGTTCAGT  950

seq1  TCTAGTGTTAGTTATCATGTCAATCTCTTACTGTGCCAAAATGATAAATT  1000
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TCTAGTGTTAGTTATCATGTC-ATCTCTTACTGTGCCAAAATGATAAATT  999

seq1  CTAATATGCATATTCAATTATGCATACCTGTAATGATGGAAGGAAATTTA  1050
      ||||||||||||||| ||| ||||||||||  ||||||||||||||||||
seq2  CTAATATGCATATTC-ATTTTGCATACCTGGTATGATGGAAGGAAATTTA  1048

seq1  AATTGTA-TCTTTAGGCAATCTCAGCATTGTGT--GAGTATCACAAGATT  1097
      ||||||| ||||||||| |||||||||||| ||   | |||||||||| |
seq2  AATTGTATTCTTTAGGC-ATCTCAGCATTGGGTTGAATTATCACAAGA-T  1096

seq1  TGCTAGCACA-TACCTG-CATGGGA  1120
      |||||||| | |||||| |||||||
seq2  TGCTAGCAAATTACCTGCCATGGGA  1121

seq1: chr12_90328635_90328845
seq2: B6Ng01-120G03.g_73_283 (reverse)

seq1  TATTTTCTCCCCTGTAGCTCCTACCTGTGCATCTATTATGCAGCTTAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTCTCCCCTGTAGCTCCTACCTGTGCATCTATTATGCAGCTTAACA  50

seq1  CTTGAACACACACACACACACACACACTCACACACACACACACACACACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAACACACACACACACACACACACTCACACACACACACACACACACA  100

seq1  CTATATATACATATATATATCCATTATTAAGGAAGCTAAGGTGAATATGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATATACATATATATATCCATTATTAAGGAAGCTAAGGTGAATATGC  150

seq1  ATTGGTGGTCATTATGTTTTAGAAGAAAATTAGAGTGATAGTTAACATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGTGGTCATTATGTTTTAGAAGAAAATTAGAGTGATAGTTAACATAT  200

seq1  TTCTTATGCCA  211
      |||||||||||
seq2  TTCTTATGCCA  211