BAC Information

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BAC

Clone NameB6Ng01-120G18
Chromosome12 (Build37)
Map Location 95,369,497 - 95,370,635
singlet/doubletsinglet
Overlap genenone
Upstream gene2610022K04Rik-ps, EG633639
Downstream geneLOC217786, LOC100039603
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-120G18.bB6Ng01-120G18.g
ACCDH924371DH924372
length1,2521,075
definitionDH924371|Mus musculus domesticus DNA, BAC clone: B6Ng01-120G18, 5' end.DH924372|Mus musculus domesticus DNA, BAC clone: B6Ng01-120G18, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtgaagctctgagccccattttttaatggggttatttgttt
ttctggagtccaccttcttgagttctttatatatattggatattagtccc
ctatctgactgaggataggtaaaaatcctttcccaatctgttggtggcct
ttttgtcttattgatggtgtcttttgccttaaagaagctttgcagtttca
tgaggtctcatttgtcaattctcgatcttacatcacaagccattgctatt
atattcaggaatttttcccctgtgcatatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgcagaattccttga
tccacttacatttgaccttactacaactagatagaaatggatcaattcgt
atttttctacctgataaccaccagttgtgccagcaacatttgttgaaaat
gctgtcttttttccactggagggttttagctcccttgttgaagatcaagt
gaccataggcgtgtgggttcatttctgggtcttcaattttattccattgg
actatttgtctgtcactataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttagatcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggtttttttgttattccagat
gaatttggagattgcactttctaattcgttgaagaattgagttggaattt
tgatggagattgcattgaatctgtagatttgcttttggcaagatagccat
ttttacaatgttgatcctgccaatccatgagcatgggagatctttccatc
ttctgagatcttctttaatttctttcttcagagacttgaagttcttatca
tacagatctttacttccttacttagcgtcactgcaaggtatttatattat
ttgtgactattgagaagggtgtgtttccctaatttccttctcagcctgtt
tattcttgtgtagaagaaggccattgacttggttgagttaatttatattc
agctacttcgccgaagctgttatcaggtttagggagtctctggatggaat
ttttaagggtacttatgataatcatacctatcatcctgccaaaggtgaat
ttgactcttcttttccacttggaatccctgaattcctttggtgtgaatgt
tctgggctaagaactcaagcctacaaaggtggataagaatagtgtgaggc
tg
gaattcaaaacataatacataacagccactatgattatgtcactgatggt
aaagttcctgttgctaatatataatgttcacataaactataaggcacaaa
aaatagttgagaatagcaacacaacaaatgaaaaatctaagacaaaaaac
caatgtgtattttcatcaaaaattttttttgtgatcatagtagatctgaa
gaaggaattaaaaggtcatgggaatgaacaaattaaaatttaaaatttgc
tgattttaatgttgacataatggaagtcactataataataataataataa
taataataataataataataataatatctccaatgagattgttacctatg
agatgcaaagtaatggataagatcataataacaagaatatgttatgtagc
ttacagaattgtggaattacctattgttggaccatgaaaaaataaacata
ctcaggaatgattagaaactcagtaattcttttctgtgaagttgtccaga
gactattgaatggaaatacttaaatgtcattatgaacttatctactccat
aattgctttggtagtaatatacctgtaccttgcaacttgacttagtgagt
atgcatgctggttattttactaatcactaggcattattactcttattata
taactttttgaggcatcttctttttttaaagatttatttatttgctatat
gtaagtacactgtacctgtattcagacacttcagaagagtgttgctggga
tttgaactcaggacctttggaagagaagtcagtgctcttaaccgctgagc
catctctccagcccttgaagcatcttcaaagtcaccaactgtgttcaaaa
catccacttctatattgcatgatgcacatttgtacctttggagcatttta
gggaagtaaagacatgaagtgctttgctgctttcttcttcctctcttctc
tcttctctcttcttctcttctctctctctctctctctctctctctttttt
cacgagaagaactttggttacagacttcagtgacatggtgtgctagtatg
aacctatcggctaagaatgaggtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_95369497_95370635
seq2: B6Ng01-120G18.g_66_1140 (reverse)

seq1  CCACATCATTCCTTAGCCGATAAGTTCATACTATGGCAACATTTGTCAAC  50
      |||| ||||| ||||||||||| ||||||||||   || ||  |||| ||
seq2  CCACCTCATT-CTTAGCCGATAGGTTCATACTAGCACACCA--TGTC-AC  46

seq1  TGAGAGTCTGTTATACCAAAAGATACTGTCTCAGTTGAAAAAAAAAAAGA  100
      ||| |||||||   ||||||   | || ||||   |||||          
seq2  TGA-AGTCTGT--AACCAAA--GTTCT-TCTC--GTGAAA----------  78

seq1  AAGAAAGAAAGAAAGAAAGAAAGGAAGAAAGAAAGAAAGAAAGAAAGAAA  150
                                         ||||| ||| ||| |
seq2  -----------------------------------AAAGAGAGAGAGAGA  93

seq1  GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAGGAAAGA  200
      || ||| ||| || |||| |  |||| || |||| |||||  |||||   
seq2  GAGAGAGAGAGAG-AAGAGAAGAAGAGAG-AAGAGAGAAGAGAGGAA--G  139

seq1  AAGAAAGCAAGCAAAGCACTTCATTGTCTTTTACTTCCCTAAAATGCTCC  250
      |||||||| |||||||||||||| |||| |||||||||||||||||||||
seq2  AAGAAAGC-AGCAAAGCACTTCA-TGTC-TTTACTTCCCTAAAATGCTCC  186

seq1  AAAGGTACAAATGTGCATCATGCAATATAGAAGTGGATGTTTTGAACACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTACAAATGTGCATCATGCAATATAGAAGTGGATGTTTTGAACACA  236

seq1  GTTGGTGACTTTGAAGATGCTTCAAGGGCTGGAGAGATGGCTCAGCGGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGTGACTTTGAAGATGCTTCAAGGGCTGGAGAGATGGCTCAGCGGTT  286

seq1  AAGAGCACTGACTTCTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCACTGACTTCTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAACA  336

seq1  CTCTTCTGAAGTGTCTGAATACAGGTACAGTGTACTTACATATAGCAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCTGAAGTGTCTGAATACAGGTACAGTGTACTTACATATAGCAAAT  386

seq1  AAATAAATCTTTAAAAAAAGAAGATGCCTCAAAAAGTTATATAATAAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAATCTTTAAAAAAAGAAGATGCCTCAAAAAGTTATATAATAAGAG  436

seq1  TAATAATGCCTAGTGATTAGTAAAATAACCAGCATGCATACTCACTAAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAATGCCTAGTGATTAGTAAAATAACCAGCATGCATACTCACTAAGT  486

seq1  CAAGTTGCAAGGTACAGGTATATTACTACCAAAGCAATTATGGAGTAGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTGCAAGGTACAGGTATATTACTACCAAAGCAATTATGGAGTAGAT  536

seq1  AAGTTCATAATGACATTTAAGTATTTCCATTCAATAGTCTCTGGACAACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCATAATGACATTTAAGTATTTCCATTCAATAGTCTCTGGACAACT  586

seq1  TCACAGAAAAGAATTACTGAGTTTCTAATCATTCCTGAGTATGTTTATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGAAAAGAATTACTGAGTTTCTAATCATTCCTGAGTATGTTTATTT  636

seq1  TTTCATGGTCCAACAATAGGTAATTCCACAATTCTGTAAGCTACATAACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATGGTCCAACAATAGGTAATTCCACAATTCTGTAAGCTACATAACA  686

seq1  TATTCTTGTTATTATGATCTTATCCATTACTTTGCATCTCATAGGTAACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTTGTTATTATGATCTTATCCATTACTTTGCATCTCATAGGTAACA  736

seq1  ATCTCATTGGAGATATTATTATTATTATTATTATTATTATTATTATTATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCATTGGAGATATTATTATTATTATTATTATTATTATTATTATTATT  786

seq1  ATTATTATAGTGACTTCCATTATGTCAACATTAAAATCAGCAAATTTTAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTATAGTGACTTCCATTATGTCAACATTAAAATCAGCAAATTTTAA  836

seq1  ATTTTAATTTGTTCATTCCCATGACCTTTTAATTCCTTCTTCAGATCTAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAATTTGTTCATTCCCATGACCTTTTAATTCCTTCTTCAGATCTAC  886

seq1  TATGATCACAAAAAAAATTTTTGATGAAAATACACATTGGTTTTTTGTCT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATCACAAAAAAAATTTTTGATGAAAATACACATTGGTTTTTTGTCT  936

seq1  TAGATTTTTCATTTGTTGTGTTGCTATTCTCAACTATTTTTTGTGCCTTA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTTTTCATTTGTTGTGTTGCTATTCTCAACTATTTTTTGTGCCTTA  986

seq1  TAGTTTATGTGAACATTATATATTAGCAACAGGAACTTTACCATCAGTGA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTATGTGAACATTATATATTAGCAACAGGAACTTTACCATCAGTGA  1036

seq1  CATAATCATAGTGGCTGTTATGTATTATGTTTTGAATTC  1139
      |||||||||||||||||||||||||||||||||||||||
seq2  CATAATCATAGTGGCTGTTATGTATTATGTTTTGAATTC  1075