BAC Information

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BAC

Clone NameB6Ng01-120L14
Chromosome12 (Build37)
Map Location 12,994,653 - 13,101,684
singlet/doubletdoublet
Overlap geneEG668473
Upstream geneLOC100043209, D12Ertd553e, LOC100043215, Mycn
Downstream geneLOC628449, Ddx1, LOC627199, LOC627189, LOC100043243, LOC100042396, LOC238091, EG633789, LOC668481
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-120L14.bB6Ng01-120L14.g
ACCDH924593DH924594
length1,027671
definitionDH924593|Mus musculus domesticus DNA, BAC clone: B6Ng01-120L14, 5' end.DH924594|Mus musculus domesticus DNA, BAC clone: B6Ng01-120L14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(13,100,652 - 13,101,684)(12,994,653 - 12,995,323)
sequence
gaattccaacctccacagtcaatgtttgtcttggggcaatgtggagcgat
taagaatgatggagtgggggtgatggagaggggacagcagtgtcacaggg
tttcacagtttggatatacttttgaggtgtcagactgaaggaggagcggc
ccaggagagaggctcttatgatagaaccgatgtgatagtgagaatagaag
gaactagggaggcgtgggtggctggctcacttccaagtatatccacgggt
agaggaatgggtacaaaatattccttccctgatcaggcagtggccagggg
ggaatgtccctcgcccagaactatgtttattgttctctgtcacagtatat
gttcagttacacagtgcatcaaactgcacccaccccaaagtctgctctag
aggccaatgtctgcctgtgactgcagagcctgagaccctcggccctcagc
cctcagcttgctagcagaatagacccagctagcttgcagggctcagctgc
aacacaggcatgactattgtggaggagaggcacaaagcagagaagccaac
acatggtaggaagtgggaaaatgtagctgcacacctccactttatctccg
tgtagcctgctggctatatccaccctctgggtctgaaacactgaagttag
tgagactcggataacatgcaagatgccagaaggaggttcttcaaggttga
agaccttgatgaaaactgaaccatggcctctaagatttgggttacagtct
tttcctagccctttaagattggacacaggaaatgagagaaaggtgacagg
ggtggccatgaaactcgggctaggtgctggtagggccccatggaagcctc
ccttggaagttgagtcattcctagaagcacatccaggctccaaactggtc
acacgatgctcagcagctctgtgcctatgttgctgcctggtatcctggtc
tgtgtgaagtgtgaatttgtagatcagcttctaatggtcagaaaaagtgc
cctgttctctgagtattggggaggggt
gaattctagccttccacatgtagctaccttccacatgtagctaccaccga
gcttcagaacacagaagaactaagtgttaaaggacaggtgttctgtaagt
ggccagattcgtgaagcctacatcaggatcagaagctaggtagacgtctc
atctcctggtatggtgttccctttagaacataactttctcaaagcaccgc
agttaccattgttgaggtctccctttggatcaagagacattgagaaagtg
ggatatggggaaatgtgtctcgaaattgaagatcactcctcaagttttct
tcttttatgtttaatttgaagcccccccccccttctaattgcattgattt
atattgtatgcaaatacatgtgggtactcctgaggaggtctgaaggggtc
agaggacagcttgggaaggttggttctgggtagagctcaagttctcaggt
gtggcagcaagcacctgatcagctgagccatctcatcagtgggatcctgg
gattaaactcaggtcttcaggtttctgtggcaagtgattttatccactga
gcctcctcatgagcccttataagatccatatttaatgaaatgggataggg
gactagaaagtgtgatataaatgaaagaagaggaggaggaagaagaagag
gaggaggaagaggaggaaaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_13100652_13101684
seq2: B6Ng01-120L14.b_48_1074 (reverse)

seq1  ACCCCT-CCCAATACCCCAGAGACAGGGGCACTTTTTTCTGACCATTAGA  49
      |||||| ||||||| | ||||||   |||||| |||||||||||||||||
seq2  ACCCCTCCCCAATA-CTCAGAGAACAGGGCAC-TTTTTCTGACCATTAGA  48

seq1  AGCTGATCTTACAAATTTCACACCTCACACAGACCCAGGGATACCAGGCA  99
      |||||||| |||||| ||||||| |||||||||||   ||||||||||||
seq2  AGCTGATC-TACAAA-TTCACACTTCACACAGACC--AGGATACCAGGCA  94

seq1  GC-ACATAGGCACAGAGCTGCCTGAGCATCGTGTGGACCAGTTTGGAGCC  148
      || ||||||||||||||||| ||||||||||||| |||||||||||||||
seq2  GCAACATAGGCACAGAGCTG-CTGAGCATCGTGT-GACCAGTTTGGAGCC  142

seq1  TGGATGTGGCTTCTAGGATTGACTCAACTTCCAAGGGAGGCTTCCATGGG  198
      ||||||| |||||||||| |||||||||||||||||||||||||||||||
seq2  TGGATGT-GCTTCTAGGAATGACTCAACTTCCAAGGGAGGCTTCCATGGG  191

seq1  GCCCTACCAGCACCTAGCCCGAGTTTCATGGCCACCCCTGTCACCTTTCT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTACCAGCACCTAGCCCGAGTTTCATGGCCACCCCTGTCACCTTTCT  241

seq1  CTCATTTCCTGTGTCCAATCTTAAAGGGCTAGG-AAAGACTGTAACCCAA  297
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CTCATTTCCTGTGTCCAATCTTAAAGGGCTAGGAAAAGACTGTAACCCAA  291

seq1  ATCTTAGAGGCCATGGTTCAGTTTTCATCAAGGTCTTCAACCTTGAAGAA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTAGAGGCCATGGTTCAGTTTTCATCAAGGTCTTCAACCTTGAAGAA  341

seq1  CCTCCTTCTGGCATCTTGCATGTTATCCGAGTCTCACTAACTTCAGTGTT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTTCTGGCATCTTGCATGTTATCCGAGTCTCACTAACTTCAGTGTT  391

seq1  TCAGACCCAGAGGGTGGATATAGCCAGCAGGCTACACGGAGATAAAGTGG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGACCCAGAGGGTGGATATAGCCAGCAGGCTACACGGAGATAAAGTGG  441

seq1  AGGTGTGCAGCTACATTTTCCCACTTCCTACCATGTGTTGGCTTCTCTGC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTGCAGCTACATTTTCCCACTTCCTACCATGTGTTGGCTTCTCTGC  491

seq1  TTTGTGCCTCTCCTCCACAATAGTCATGCCTGTGTTGCAGCTGAGCCCTG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGCCTCTCCTCCACAATAGTCATGCCTGTGTTGCAGCTGAGCCCTG  541

seq1  CAAGCTAGCTGGGTCTATTCTGCTAGCAAGCTGAGGGCTGAGGGCCGAGG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTAGCTGGGTCTATTCTGCTAGCAAGCTGAGGGCTGAGGGCCGAGG  591

seq1  GTCTCAGGCTCTGCAGTCACAGGCAGACATTGGCCTCTAGAGCAGACTTT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCAGGCTCTGCAGTCACAGGCAGACATTGGCCTCTAGAGCAGACTTT  641

seq1  GGGGTGGGTGCAGTTTGATGCACTGTGTAACTGAACATATACTGTGACAG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTGGGTGCAGTTTGATGCACTGTGTAACTGAACATATACTGTGACAG  691

seq1  AGAACAATAAACATAGTTCTGGGCGAGGGACATTCCCCCCTGGCCACTGC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAATAAACATAGTTCTGGGCGAGGGACATTCCCCCCTGGCCACTGC  741

seq1  CTGATCAGGGAAGGAATATTTTGTACCCATTCCTCTACCCGTGGATATAC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATCAGGGAAGGAATATTTTGTACCCATTCCTCTACCCGTGGATATAC  791

seq1  TTGGAAGTGAGCCAGCCACCCACGCCTCCCTAGTTCCTTCTATTCTCACT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAGTGAGCCAGCCACCCACGCCTCCCTAGTTCCTTCTATTCTCACT  841

seq1  ATCACATCGGTTCTATCATAAGAGCCTCTCTCCTGGGCCGCTCCTCCTTC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACATCGGTTCTATCATAAGAGCCTCTCTCCTGGGCCGCTCCTCCTTC  891

seq1  AGTCTGACACCTCAAAAGTATATCCAAACTGTGAAACCCTGTGACACTGC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGACACCTCAAAAGTATATCCAAACTGTGAAACCCTGTGACACTGC  941

seq1  TGTCCCCTCTCCATCACCCCCACTCCATCATTCTTAATCGCTCCACATTG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCCTCTCCATCACCCCCACTCCATCATTCTTAATCGCTCCACATTG  991

seq1  CCCCAAGACAAACATTGACTGTGGAGGTTGGAATTC  1033
      ||||||||||||||||||||||||||||||||||||
seq2  CCCCAAGACAAACATTGACTGTGGAGGTTGGAATTC  1027

seq1: chr12_12994653_12995323
seq2: B6Ng01-120L14.g_66_736

seq1  GAATTCTAGCCTTCCACATGTAGCTACCTTCCACATGTAGCTACCACCGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGCCTTCCACATGTAGCTACCTTCCACATGTAGCTACCACCGA  50

seq1  GCTTCAGAACACAGAAGAACTAAGTGTTAAAGGACAGGTGTTCTGTAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCAGAACACAGAAGAACTAAGTGTTAAAGGACAGGTGTTCTGTAAGT  100

seq1  GGCCAGATTCGTGAAGCCTACATCAGGATCAGAAGCTAGGTAGACGTCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGATTCGTGAAGCCTACATCAGGATCAGAAGCTAGGTAGACGTCTC  150

seq1  ATCTCCTGGTATGGTGTTCCCTTTAGAACATAACTTTCTCAAAGCACCGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCTGGTATGGTGTTCCCTTTAGAACATAACTTTCTCAAAGCACCGC  200

seq1  AGTTACCATTGTTGAGGTCTCCCTTTGGATCAAGAGACATTGAGAAAGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACCATTGTTGAGGTCTCCCTTTGGATCAAGAGACATTGAGAAAGTG  250

seq1  GGATATGGGGAAATGTGTCTCGAAATTGAAGATCACTCCTCAAGTTTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATGGGGAAATGTGTCTCGAAATTGAAGATCACTCCTCAAGTTTTCT  300

seq1  TCTTTTATGTTTAATTTGAAGCCCCCCCCCCCTTCTAATTGCATTGATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTATGTTTAATTTGAAGCCCCCCCCCCCTTCTAATTGCATTGATTT  350

seq1  ATATTGTATGCAAATACATGTGGGTACTCCTGAGGAGGTCTGAAGGGGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGTATGCAAATACATGTGGGTACTCCTGAGGAGGTCTGAAGGGGTC  400

seq1  AGAGGACAGCTTGGGAAGGTTGGTTCTGGGTAGAGCTCAAGTTCTCAGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGACAGCTTGGGAAGGTTGGTTCTGGGTAGAGCTCAAGTTCTCAGGT  450

seq1  GTGGCAGCAAGCACCTGATCAGCTGAGCCATCTCATCAGTGGGATCCTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCAGCAAGCACCTGATCAGCTGAGCCATCTCATCAGTGGGATCCTGG  500

seq1  GATTAAACTCAGGTCTTCAGGTTTCTGTGGCAAGTGATTTTATCCACTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAAACTCAGGTCTTCAGGTTTCTGTGGCAAGTGATTTTATCCACTGA  550

seq1  GCCTCCTCATGAGCCCTTATAAGATCCATATTTAATGAAATGGGATAGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCCTCATGAGCCCTTATAAGATCCATATTTAATGAAATGGGATAGGG  600

seq1  GACTAGAAAGTGTGATATAAATGAAAGAAGAGGAGGAGGAAGAAGAAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAGAAAGTGTGATATAAATGAAAGAAGAGGAGGAGGAAGAAGAAGAG  650

seq1  GAGGAGGAAGAGGAGGAAAGA  671
      |||||||||||||||||||||
seq2  GAGGAGGAAGAGGAGGAAAGA  671