BAC Information

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BAC

Clone NameB6Ng01-121C10
Chromosome12 (Build37)
Map Location 86,958,366 - 87,087,864
singlet/doubletdoublet
Overlap geneJundm2, LOC100042073, Batf, BC011209
Upstream gene7420416P09Rik, Tmem90a, Npc2, Isca2, Ltbp2, 1110018G07Rik, Fcf1, Ylpm1, Prox2, Dlst, Rps6kl1, LOC100042021, Pgf, Eif2b2, Mlh3, Acyp1, 2810002I04Rik, Nek9, Tmed10, LOC100042549, LOC667119, Fos, EG667124
Downstream gene0610007P14Rik, Ttll5, Tgfb3, 1700019E19Rik, 1700020O03Rik, LOC100042112, Esrrb, LOC667191, Vash1, Angel1, EG627607
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-121C10.bB6Ng01-121C10.g
ACCDH924906DH924907
length9281,128
definitionDH924906|Mus musculus domesticus DNA, BAC clone: B6Ng01-121C10, 5' end.DH924907|Mus musculus domesticus DNA, BAC clone: B6Ng01-121C10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(86,958,366 - 86,959,293)(87,086,732 - 87,087,864)
sequence
gaattcccaggcagggtggaggctgcttgtaatcccagcactggggaggc
agacctgagatcatcagagccaaggagctagctagactatccagagtcgg
tgagctctgtgttcagtgggagactcggcctcaatgaaaggagtggagag
cgattcagaagacgtctaacgtccactttgtgcctcctcacacgcatgca
cactcttgagcaaaccgtaccatgtagcaaaatgccgttggaccacaaaa
aggctgagggcctgtacatcggtgtactgaggagaagcagccagtcacac
agaatcaaatgtcccgtgatgtgtgctgctcagaatagtcaagtagacct
agaactgttctcctggtcaccttagggaggcaggaggaatggggaggagc
tgtggcagggctggggctttggggcgtcacaggaagggagtataaaatgt
ataaaaatgtaaaaatgtataaagttggctatggttatgcaagttacaca
actcaggctgacgagagctactaatcacatcgcttggtgcattagttcta
tatgtgaactttatctcaataatacaaattggaaagcacggtgtctgtct
cacagggttctgcggaggtgtcatataacagttctcccagcatgcagcag
tgtttgggaatccacagccatggctgttaaatcctccgctggggctgggg
agagctaagtggtgcttgttttgcagagggcccaagttcgattcccagca
tctacatggtggctcacagtcgttcctagtccctgttccaggggatccaa
caggcacacacacggtgcatgcaggcaaaacatccgtgcacataataaat
aggtagatagattagatagattagatagattagatagattagatagatta
gatagatagatagatagatagatagata
gaattccgactctggcgcaggtctgtcattgctctcctcctggttgagac
tttcattcaccatgaccacaacgagctcctgaatcccaggcacgtactga
ctcctacagtcttatgggtcagcagccttttgcctgtccccctagagctg
aggcaacacttctccgggagcgcacctctgttagcggagaaatcgagatc
tcaggttcctacgatcactccctagcaaactgttgtcccccaagttggcc
gcagacgccttgccacgcgttccaggctgtccagatgaagcgttgaccgt
cctggaaaaagtttgactcctgaacagcgaactgtggcagggcgagctcg
gtttgctcccgggcaggctggggcctcgccccctcgggcgcacgtgaccg
ccccgccccccggcctgcccggctccccacgcccctcaacccctcccacc
caggatcccctgcctccttgagcggggctcgcaaggcgccgctcttgttt
cgccataggttggggtgtacattcctctccgacgtccccggtgtcatgga
aaccgcccggttagcccccacccctacactttccctaaattcacttgtcc
cccccactcccagaggtcttcgttggtaaatgaggacttcgcctcacgcc
cttccgaggtcagagtcttctcggggccagcgggcgtgcaccgaggctcg
gagtccctaaactgctcagggggatccgagagagatccctaccttcctct
cttttgctgggctctccaggtgacagttcagtgtgcctggtgaaaggaat
gcttgcttttctcagagacctcccagccgacaaagacttattttggtgaa
ctcgtatatgaacttgtttagtgtctgacgggtccctgaggtctcccact
agggaaccccgcgagccaagcatagcctggagggaaagttgtgaaccagt
ctctgcgcaggctctgggagtgaggcacgaagtgactcatacagcctcgt
agccctccgctgccactaccgatccctgagcgttcacctcttagctggaa
gccaggcttcagaagaggaatgctgcctggcgctggttcccacaactcca
tgggtttcacagtgattaaggacccaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_86958366_86959293
seq2: B6Ng01-121C10.b_50_977

seq1  GAATTCCCAGGCAGGGTGGAGGCTGCTTGTAATCCCAGCACTGGGGAGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCAGGCAGGGTGGAGGCTGCTTGTAATCCCAGCACTGGGGAGGC  50

seq1  AGACCTGAGATCATCAGAGCCAAGGAGCTAGCTAGACTATCCAGAGTCGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCTGAGATCATCAGAGCCAAGGAGCTAGCTAGACTATCCAGAGTCGG  100

seq1  TGAGCTCTGTGTTCAGTGGGAGACTCGGCCTCAATGAAAGGAGTGGAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTCTGTGTTCAGTGGGAGACTCGGCCTCAATGAAAGGAGTGGAGAG  150

seq1  CGATTCAGAAGACGTCTAACGTCCACTTTGTGCCTCCTCACACGCATGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATTCAGAAGACGTCTAACGTCCACTTTGTGCCTCCTCACACGCATGCA  200

seq1  CACTCTTGAGCAAACCGTACCATGTAGCAAAATGCCGTTGGACCACAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTTGAGCAAACCGTACCATGTAGCAAAATGCCGTTGGACCACAAAA  250

seq1  AGGCTGAGGGCCTGTACATCGGTGTACTGAGGAGAAGCAGCCAGTCACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGAGGGCCTGTACATCGGTGTACTGAGGAGAAGCAGCCAGTCACAC  300

seq1  AGAATCAAATGTCCCGTGATGTGTGCTGCTCAGAATAGTCAAGTAGACCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCAAATGTCCCGTGATGTGTGCTGCTCAGAATAGTCAAGTAGACCT  350

seq1  AGAACTGTTCTCCTGGTCACCTTAGGGAGGCAGGAGGAATGGGGAGGAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTGTTCTCCTGGTCACCTTAGGGAGGCAGGAGGAATGGGGAGGAGC  400

seq1  TGTGGCAGGGCTGGGGCTTTGGGGCGTCACAGGAAGGGAGTATAAAATGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCAGGGCTGGGGCTTTGGGGCGTCACAGGAAGGGAGTATAAAATGT  450

seq1  ATAAAAATGTAAAAATGTATAAAGTTGGCTATGGTTATGCAAGTTACACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAATGTAAAAATGTATAAAGTTGGCTATGGTTATGCAAGTTACACA  500

seq1  ACTCAGGCTGACGAGAGCTACTAATCACATCGCTTGGTGCATTAGTTCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGGCTGACGAGAGCTACTAATCACATCGCTTGGTGCATTAGTTCTA  550

seq1  TATGTGAACTTTATCTCAATAATACAAATTGGAAAGCACGGTGTCTGTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGAACTTTATCTCAATAATACAAATTGGAAAGCACGGTGTCTGTCT  600

seq1  CACAGGGTTCTGCGGAGGTGTCATATAACAGTTCTCCCAGCATGCAGCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGGTTCTGCGGAGGTGTCATATAACAGTTCTCCCAGCATGCAGCAG  650

seq1  TGTTTGGGAATCCACAGCCATGGCTGTTAAATCCTCCGCTGGGGCTGGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGGGAATCCACAGCCATGGCTGTTAAATCCTCCGCTGGGGCTGGGG  700

seq1  AGAGCTAAGTGGTGCTTGTTTTGCAGAGGGCCCAAGTTCGATTCCCAGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTAAGTGGTGCTTGTTTTGCAGAGGGCCCAAGTTCGATTCCCAGCA  750

seq1  TCTACATGGTGGCTCACAGTCGTTCCTAGTCCCTGTTCCAGGGGATCCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACATGGTGGCTCACAGTCGTTCCTAGTCCCTGTTCCAGGGGATCCAA  800

seq1  CAGGCACACACACGGTGCATGCAGGCAAAACATCCGTGCACATAATAAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCACACACACGGTGCATGCAGGCAAAACATCCGTGCACATAATAAAT  850

seq1  AGGTAGATAGATTAGATAGATTAGATAGATTAGATAGATTAGATAGATTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAGATAGATTAGATAGATTAGATAGATTAGATAGATTAGATAGATTA  900

seq1  GATAGATAGATAGATAGATAGATAGATA  928
      ||||||||||||||||||||||||||||
seq2  GATAGATAGATAGATAGATAGATAGATA  928

seq1: chr12_87086732_87087864
seq2: B6Ng01-121C10.g_69_1196 (reverse)

seq1  TTTGGGTTCTTTATCACTGTG-AACCCATGGAGTTGTAGGGACCAGCGCA  49
      ||||||| ||| ||||||||| ||||||||||||||| || |||||||| 
seq2  TTTGGGTCCTTAATCACTGTGAAACCCATGGAGTTGTGGGAACCAGCGCC  50

seq1  AGCCAGCATTCCTTCTCTGAAAGCCTTGCTTCCAGGCTAAGAGGTG-ACG  98
      || ||||||||||  |||| |||||| ||||||| ||||||||||| |||
seq2  AGGCAGCATTCCTCTTCTG-AAGCCTGGCTTCCA-GCTAAGAGGTGAACG  98

seq1  CTCAGGGGATCGGTAGGTGGCAGCGGAGGGCTACGAGGCTGTATGAGTCA  148
      |||| |||||||||| ||||||||||||||||||||||||||||||||||
seq2  CTCA-GGGATCGGTA-GTGGCAGCGGAGGGCTACGAGGCTGTATGAGTCA  146

seq1  CTTCGTTGCCTCACTCCCAGAGCCTGCGCAGAGACTTGGTTCCACAACTT  198
      ||||| ||||||||||||||||||||||||||||| ||||| ||||||||
seq2  CTTCG-TGCCTCACTCCCAGAGCCTGCGCAGAGAC-TGGTT-CACAACTT  193

seq1  TCCCTCCAGGCTATGCTTGGCTCGCGGGGTTCCCTAGTGGGAGACCTCAG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCCAGGCTATGCTTGGCTCGCGGGGTTCCCTAGTGGGAGACCTCAG  243

seq1  GGACCCGTCAGACACTAAACAAGTTCATATACGAGTTCACCAAAATAAGT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCCGTCAGACACTAAACAAGTTCATATACGAGTTCACCAAAATAAGT  293

seq1  CTTTGTCGGCTGGGAGGTCTCTGAGAAAAGCAAGCATTCCTTTCACCAGG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTCGGCTGGGAGGTCTCTGAGAAAAGCAAGCATTCCTTTCACCAGG  343

seq1  CACACTGAACTGTCACCTGGAGAGCCCAGCAAAAGAGAGGAAGGTAGGGA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTGAACTGTCACCTGGAGAGCCCAGCAAAAGAGAGGAAGGTAGGGA  393

seq1  TCTCTCTCGGATCCCCCTGAGCAGTTTAGGGACTCCGAGCCTCGGTGCAC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCGGATCCCCCTGAGCAGTTTAGGGACTCCGAGCCTCGGTGCAC  443

seq1  GCCCGCTGGCCCCGAGAAGACTCTGACCTCGGAAGGGCGTGAGGCGAAGT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCGCTGGCCCCGAGAAGACTCTGACCTCGGAAGGGCGTGAGGCGAAGT  493

seq1  CCTCATTTACCAACGAAGACCTCTGGGAGTGGGGGGGACAAGTGAATTTA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATTTACCAACGAAGACCTCTGGGAGTGGGGGGGACAAGTGAATTTA  543

seq1  GGGAAAGTGTAGGGGTGGGGGCTAACCGGGCGGTTTCCATGACACCGGGG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAAGTGTAGGGGTGGGGGCTAACCGGGCGGTTTCCATGACACCGGGG  593

seq1  ACGTCGGAGAGGAATGTACACCCCAACCTATGGCGAAACAAGAGCGGCGC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTCGGAGAGGAATGTACACCCCAACCTATGGCGAAACAAGAGCGGCGC  643

seq1  CTTGCGAGCCCCGCTCAAGGAGGCAGGGGATCCTGGGTGGGAGGGGTTGA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCGAGCCCCGCTCAAGGAGGCAGGGGATCCTGGGTGGGAGGGGTTGA  693

seq1  GGGGCGTGGGGAGCCGGGCAGGCCGGGGGGCGGGGCGGTCACGTGCGCCC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCGTGGGGAGCCGGGCAGGCCGGGGGGCGGGGCGGTCACGTGCGCCC  743

seq1  GAGGGGGCGAGGCCCCAGCCTGCCCGGGAGCAAACCGAGCTCGCCCTGCC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGGCGAGGCCCCAGCCTGCCCGGGAGCAAACCGAGCTCGCCCTGCC  793

seq1  ACAGTTCGCTGTTCAGGAGTCAAACTTTTTCCAGGACGGTCAACGCTTCA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTCGCTGTTCAGGAGTCAAACTTTTTCCAGGACGGTCAACGCTTCA  843

seq1  TCTGGACAGCCTGGAACGCGTGGCAAGGCGTCTGCGGCCAACTTGGGGGA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGACAGCCTGGAACGCGTGGCAAGGCGTCTGCGGCCAACTTGGGGGA  893

seq1  CAACAGTTTGCTAGGGAGTGATCGTAGGAACCTGAGATCTCGATTTCTCC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGTTTGCTAGGGAGTGATCGTAGGAACCTGAGATCTCGATTTCTCC  943

seq1  GCTAACAGAGGTGCGCTCCCGGAGAAGTGTTGCCTCAGCTCTAGGGGGAC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAACAGAGGTGCGCTCCCGGAGAAGTGTTGCCTCAGCTCTAGGGGGAC  993

seq1  AGGCAAAAGGCTGCTGACCCATAAGACTGTAGGAGTCAGTACGTGCCTGG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAAAAGGCTGCTGACCCATAAGACTGTAGGAGTCAGTACGTGCCTGG  1043

seq1  GATTCAGGAGCTCGTTGTGGTCATGGTGAATGAAAGTCTCAACCAGGAGG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCAGGAGCTCGTTGTGGTCATGGTGAATGAAAGTCTCAACCAGGAGG  1093

seq1  AGAGCAATGACAGACCTGCGCCAGAGTCGGAATTC  1133
      |||||||||||||||||||||||||||||||||||
seq2  AGAGCAATGACAGACCTGCGCCAGAGTCGGAATTC  1128