BAC Information

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BAC

Clone NameB6Ng01-121G21
Chromosome12 (Build37)
Map Location 13,401,207 - 13,402,387
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043215, Mycn, EG668473, LOC628449, Ddx1
Downstream geneLOC627199, LOC627189, LOC100043243, LOC100042396, LOC238091, EG633789, LOC668481, AW125753
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-121G21.bB6Ng01-121G21.g
ACCDH925116DH925117
length1,1791,203
definitionDH925116|Mus musculus domesticus DNA, BAC clone: B6Ng01-121G21, 5' end.DH925117|Mus musculus domesticus DNA, BAC clone: B6Ng01-121G21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgatgtaaatatctgatatgcaacctctgcgaaaggttcctttg
actcctaaaaagatcatatcccacaggttgacaactgatggtttagatag
tactttcctgggaacaagctaagctactaagtcatgaaccatagagagac
acagtttcattctttgtaaactgtgccttaggtgtgcttctgtttgcatt
tctctgccatctgactgtaactctgttgagcatcttttagacctaaagga
ctttggaagtcccagtctgccctggttttcttggagttctcccttttaga
ccatcctaagctttttatcctccattctagaaacacattttaaaatttgc
ttcctattatgaggacaataggcattatttctgacttgagcatttcttgt
aacatctgaagtattgttttttggtcaaaaaaaacaaggaaagctgagaa
tctccttagtatcctatgaccctgactttccaattctatccaaatcttat
cctatcagtctataagaaattctgcactttgtttcattaaattattcact
ctttattttaagatgatgaaatattcaagcttaatcatttgggcttcact
tactttgtaaatacacttgtaattttataaaatggagacattatccattt
ttgttatgactttttttttttattaatgtatgtcagtgtgtgacctgaag
cattactgtgcttcacagcattgaatggttgcacttgattttttcctcct
ccttctgtctgaatttagttgatgtgatggtttgtatattcttggacaag
ggagtggcaccatctggaggtggggccttgatggaataggtgtgacctgg
ttggaataggtgcgccactgtgggtgtgggcttaagacactcaccccagt
tgcctggaagtcagtcttccactagcagcctttggatgaagatgtagaac
tctcagctctgcctgtgccatgcctgcctggttactgccatgcctccacc
tgataataataactgaaccttctgaacctgtaagccgtccccattaaatt
tttttttgttttgttttggtttggtttttaataagaacttgcctgtggtc
aatggtgtctgtctatagcagtaaaccttaacataagacagagttgttta
ccaggactagaatgcgtgtggtaggcctg
gaattctcacctgaggaataccgagtggctaagaagcaccaaaaaatgtt
caaaatccttaatcctcagggaaatgcaaatcaaaacaaccctgagattc
cacctcacaccagtcagaatggctaagatcaaaaatcagatgacagtaga
tgctggcgtggatgtggagaaagaggaacactccttgattgttggtggga
ttgcaagcttgtacaaccactctggaaatcagtctggtggttcctcagaa
aactggacatagtactacaggaggatcctgcaatacctcttctgggcata
tatccagaagatgccccaactggtaagaaggacacatgctccactatctt
catagcagccttatttataatagccagaagctggaaagaaaccagatgtc
cctcaacagaggaatggatacagaaaatatggtacatttacacaatggag
tactactcagctattaaaaagaatgaatttatgaaattcctagccaaatg
gatggacctggagggcatcatcctgagtgaggtaacccaatcacaaaaga
actcgcacaatatgtactcactgataagtggatattagcccagaaactta
ggatatccaagatataagatacaatttgctaaacgcatgaaactcaaaga
agaaagaagaccaaagtgtggacactttgccccttcatagaattgggaac
aaaacacccatggaaggagttacagagacaaagtttggagctgagatgaa
aggatggactatctagagactgccatatcccggggatccatcccataatc
agcttccaaacgctgacaccatttcatacactagcaagattttgctgaat
ggacccagatatggctgtctctgtgagactatgccggggcctggcaacac
agaagtagatgctcacagtcagctatgggatggatcacagggccccaatg
gaaggagctagaagaagtactgaaggatctgaaggatctgcaatcctatt
agggtggaagaccaatatgaactaacaatacgctccctcctcccccaacc
ctggtgtctctagctgcaatagaatcagaaaaaggctcatagtctggcca
tggagtgaaaatgaggactccatggttcgtgctaactcaatatgcctcaa
tccagagagaatgccagggctcaaagatagtggaagtgcggcgtcgcggc
gat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_13401207_13402387
seq2: B6Ng01-121G21.b_46_1224

seq1  GAATTCTGATGTAAATATCTGATATGCAACCTCTGCGAAAGGTTCCTTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGATGTAAATATCTGATATGCAACCTCTGCGAAAGGTTCCTTTG  50

seq1  ACTCCTAAAAAGATCATATCCCACAGGTTGACAACTGATGGTTTAGATAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTAAAAAGATCATATCCCACAGGTTGACAACTGATGGTTTAGATAG  100

seq1  TACTTTCCTGGGAACAAGCTAAGCTACTAAGTCATGAACCATAGAGAGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTCCTGGGAACAAGCTAAGCTACTAAGTCATGAACCATAGAGAGAC  150

seq1  ACAGTTTCATTCTTTGTAAACTGTGCCTTAGGTGTGCTTCTGTTTGCATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTTCATTCTTTGTAAACTGTGCCTTAGGTGTGCTTCTGTTTGCATT  200

seq1  TCTCTGCCATCTGACTGTAACTCTGTTGAGCATCTTTTAGACCTAAAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGCCATCTGACTGTAACTCTGTTGAGCATCTTTTAGACCTAAAGGA  250

seq1  CTTTGGAAGTCCCAGTCTGCCCTGGTTTTCTTGGAGTTCTCCCTTTTAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGAAGTCCCAGTCTGCCCTGGTTTTCTTGGAGTTCTCCCTTTTAGA  300

seq1  CCATCCTAAGCTTTTTATCCTCCATTCTAGAAACACATTTTAAAATTTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCCTAAGCTTTTTATCCTCCATTCTAGAAACACATTTTAAAATTTGC  350

seq1  TTCCTATTATGAGGACAATAGGCATTATTTCTGACTTGAGCATTTCTTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTATTATGAGGACAATAGGCATTATTTCTGACTTGAGCATTTCTTGT  400

seq1  AACATCTGAAGTATTGTTTTTTGGTCAAAAAAAACAAGGAAAGCTGAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCTGAAGTATTGTTTTTTGGTCAAAAAAAACAAGGAAAGCTGAGAA  450

seq1  TCTCCTTAGTATCCTATGACCCTGACTTTCCAATTCTATCCAAATCTTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTTAGTATCCTATGACCCTGACTTTCCAATTCTATCCAAATCTTAT  500

seq1  CCTATCAGTCTATAAGAAATTCTGCACTTTGTTTCATTAAATTATTCACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATCAGTCTATAAGAAATTCTGCACTTTGTTTCATTAAATTATTCACT  550

seq1  CTTTATTTTAAGATGATGAAATATTCAAGCTTAATCATTTGGGCTTCACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATTTTAAGATGATGAAATATTCAAGCTTAATCATTTGGGCTTCACT  600

seq1  TACTTTGTAAATACACTTGTAATTTTATAAAATGGAGACATTATCCATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTGTAAATACACTTGTAATTTTATAAAATGGAGACATTATCCATTT  650

seq1  TTGTTATGACTTTTTTTTTTTATTAATGTATGTCAGTGTGTGACCTGAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTATGACTTTTTTTTTTTATTAATGTATGTCAGTGTGTGACCTGAAG  700

seq1  CATTACTGTGCTTCACAGCATTGAATGGTTGCACTTGATTTTTTCCTCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTACTGTGCTTCACAGCATTGAATGGTTGCACTTGATTTTTTCCTCCT  750

seq1  CCTTCTGTCTGAATTTAGTTGATGTGATGGTTTGTATATTCTTGGACAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTGTCTGAATTTAGTTGATGTGATGGTTTGTATATTCTTGGACAAG  800

seq1  GGAGTGGCACCATCTGGAGGTGGGGCCTTGATGGAATAGGTGTGACCTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTGGCACCATCTGGAGGTGGGGCCTTGATGGAATAGGTGTGACCTGG  850

seq1  TTGGAATAGGTGCGCCACTGTGGGTGTGGGCTTAAGACACTCACCCCAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAATAGGTGCGCCACTGTGGGTGTGGGCTTAAGACACTCACCCCAGT  900

seq1  TGCCTGGAAGTCAGTCTTCCACTAGCAGCCTTTGGATGAAGATGTAGAAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGGAAGTCAGTCTTCCACTAGCAGCCTTTGGATGAAGATGTAGAAC  950

seq1  TCTCAGCTCTGCCTGTGCCATGCCTGCCTGGTTACTGCCATGCTCCCACC  1000
      |||||||||||||||||||||||||||||||||||||||||||  |||||
seq2  TCTCAGCTCTGCCTGTGCCATGCCTGCCTGGTTACTGCCATGCCTCCACC  1000

seq1  TTGATAATAATAAACTGAACC-TCTGAACCTGTAAGCCGTCCCCAATTAA  1049
       |||||||||| ||||||||| |||||||||||||||||||||| |||||
seq2  -TGATAATAAT-AACTGAACCTTCTGAACCTGTAAGCCGTCCCC-ATTAA  1047

seq1  ATTTTTTTTTGTTTTGTTTTGTTTTGTTTTTTAATAAG-ACTTG-CTGTG  1097
      ||||||||||||||||||||| |||| ||||||||||| ||||| |||||
seq2  ATTTTTTTTTGTTTTGTTTTGGTTTGGTTTTTAATAAGAACTTGCCTGTG  1097

seq1  GTC-ATGGTGTCTGTTCATAGCAGTAAAACCCTAAC-TAAGACAGAAGTT  1145
      ||| |||||||||||  |||||||| ||||| |||| |||||||| ||||
seq2  GTCAATGGTGTCTGTCTATAGCAGT-AAACCTTAACATAAGACAG-AGTT  1145

seq1  G-ATACCAGGGACTCAGGTATTGC-TGTGGTAGGCCTG  1181
      |  ||||| ||||| ||  | ||| |||||||||||||
seq2  GTTTACCA-GGACT-AG--AATGCGTGTGGTAGGCCTG  1179