BAC Information

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BAC

Clone NameB6Ng01-121K24
Chromosome12 (Build37)
Map Location 62,121,261 - 62,122,385
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC665665, Ppia-ps12_475.1
Downstream geneLOC100040300, LOC665677, Nanog-ps2, Lrfn5, LOC665699, LOC665707
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-121K24.bB6Ng01-121K24.g
ACCDH925310DH925311
length1,1761,110
definitionDH925310|Mus musculus domesticus DNA, BAC clone: B6Ng01-121K24, 5' end.DH925311|Mus musculus domesticus DNA, BAC clone: B6Ng01-121K24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttgtttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ctttgtcttattgacggtgtcttttgccttgcagaaattttggagtttca
ttaggtcccatttgtcaattctcaatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttctttga
tccatttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccatttgttgaaaat
gctgtctttcttccactggatggttttagcttccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggttttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttaccacaattgc
tctgtagtaaaactttaggtcaggcatggtgattccaccagaggttcttt
tatccttaagaagaatttttgctatcctaggtttttttgttattccagat
gaatttgcaaattgctccttctaattcgttgaagaattgagttggaattt
tgatggggatttcattgaatctgtagattgcttttggcaagatagccatt
tttacaatattgatcctgccaatccatgagcatgggagatctttccatct
tctgagatcttctttaatttctttcttcagagacttgaagttttatcata
cagatctttcacttccttagttagagtcacgcgagatattttatattatt
tgtgactatgagaacgtgtgtttccctaatttctttctcagctgttattc
tttgtgtagagaagcattgactgttgatattttataattccagctactca
ctgagctgttatcagtttaggagttcctctgtgatttagttcacttatat
actatcaatcatctgcaagggaattggacctccccgtccatggatcctga
attcatagtgtgcgaatgcctctgct
gaattcaccaatttttcccatggttcaaggatatttctcaagccttgctt
gtttctcagccctgctctgtttcctgtgaaatgaaggaagcatcaaggca
gtacccagccctcgttcaacttgactttctttctccatggattgtataat
ggccttaactctataggactgctttgaatttgtgattatgtttttgtctt
ttgttgtcagtaaaacttataaactttcttaacttcgaaccactcactgt
actttctttatccaggcacacatgtgctgacaaaagccttgttaacacag
cagatggcttagatgcccttgtctctgcatatagatgcccttgtctctgc
atatagatgcccttgtctctacatatctctacatactcatcacatttcat
cctcttttctaaaattcttgatagaaaagttattatcacaggatgtacta
tattataaaagaactctactccactgtgcaggtcagtacatgctgtcaat
gtctagtcatagtatttcctttatctttaacatttctgctaagtattata
aatttgcactatgtttaaacatgatgaaatgtagacagttctttcattct
gaatcttgaatgaagactgtaggttacactgaaacccatcagtaatgact
atgtactgtgagaaaggaatagttatatatccatttaaagtgataatatt
gtttaaacctctttactgttatatagaaatcttgccgtcaatgactttga
caaaaattttagccaggagaatcactgaaacaaaaaataacacactaacc
tctagattagtgatcagattgaagggaagataaaaattgttaatggctat
gagaaaaatattaatctaagttgcatagcatgaagatttgtttatatggt
aagtcattatttgaagacttcaattatgtttattgaaattttagtaaata
gctgggaacattgcagttgagtagctgctgagcattatagtgatattgat
tgtattgacaggatataaaatcacttaacatacctatgtgtgtatcgggt
ccatgttatatatgtggctagggccatgtatgggactgccttgtagtgtt
atgaataagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_62121261_62122385
seq2: B6Ng01-121K24.g_67_1176

seq1  GAATTCACCAATTTTTCCCATGGTTCAAGGATATTTCTCAAGCCTTGCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCAATTTTTCCCATGGTTCAAGGATATTTCTCAAGCCTTGCTT  50

seq1  GTTTCTCAGCCCTGCTCTGTTTCCTGTGAAATGAAGGAAGCATCAAGGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTCAGCCCTGCTCTGTTTCCTGTGAAATGAAGGAAGCATCAAGGCA  100

seq1  GTACCCAGCCCTCGTTCAACTTGACTTTCTTTCTCCATGGATTGTATAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCCAGCCCTCGTTCAACTTGACTTTCTTTCTCCATGGATTGTATAAT  150

seq1  GGCCTTAACTCTATAGGACTGCTTTGAATTTGTGATTATGTTTTTGTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTAACTCTATAGGACTGCTTTGAATTTGTGATTATGTTTTTGTCTT  200

seq1  TTGTTGTCAGTAAAACTTATAAACTTTCTTAACTTCGAACCACTCACTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGTCAGTAAAACTTATAAACTTTCTTAACTTCGAACCACTCACTGT  250

seq1  ACTTTCTTTATCCAGGCACACATGTGCTGACAAAAGCCTTGTTAACACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCTTTATCCAGGCACACATGTGCTGACAAAAGCCTTGTTAACACAG  300

seq1  CAGATGGCTTAGATGCCCTTGTCTCTGCATATAGATGCCCTTGTCTCTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGGCTTAGATGCCCTTGTCTCTGCATATAGATGCCCTTGTCTCTGC  350

seq1  ATATAGATGCCCTTGTCTCTACATATCTCTACATACTCATCACATTTCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGATGCCCTTGTCTCTACATATCTCTACATACTCATCACATTTCAT  400

seq1  CCTCTTTTCTAAAATTCTTGATAGAAAAGTTATTATCACAGGATGTACTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTTTCTAAAATTCTTGATAGAAAAGTTATTATCACAGGATGTACTA  450

seq1  TATTATAAAAGAACTCTACTCCACTGTGCAGGTCAGTACATGCTGTCAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATAAAAGAACTCTACTCCACTGTGCAGGTCAGTACATGCTGTCAAT  500

seq1  GTCTAGTCATAGTATTTCCTTTATCTTTAACATTTCTGCTAAGTATTATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAGTCATAGTATTTCCTTTATCTTTAACATTTCTGCTAAGTATTATA  550

seq1  AATTTGCACTATGTTTAAACATGATGAAATGTAGACAGTTCTTTCATTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGCACTATGTTTAAACATGATGAAATGTAGACAGTTCTTTCATTCT  600

seq1  GAATCTTGAATGAAGACTGTAGGTTACACTGAAACCCATCAGTAATGACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTTGAATGAAGACTGTAGGTTACACTGAAACCCATCAGTAATGACT  650

seq1  ATGTACTGTGAGAAAGGAATAGTTATATATCCATTTAAAGTGATAATATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTACTGTGAGAAAGGAATAGTTATATATCCATTTAAAGTGATAATATT  700

seq1  GTTTAAACCTCTTTACTGTTATATAGAAATCTTGCCGTCAATGACTTTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAAACCTCTTTACTGTTATATAGAAATCTTGCCGTCAATGACTTTGA  750

seq1  CAAAAATTTTAGCCAGGAGAATCACTGAAACAAAAAATAACACACTAACC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAATTTTAGCCAGGAGAATCACTGAAACAAAAAATAACACACTAACC  800

seq1  TCTAGATTAGTGATCAGATTGAAGGGAAGAT-AAAATTGTTAATGGCTAT  849
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TCTAGATTAGTGATCAGATTGAAGGGAAGATAAAAATTGTTAATGGCTAT  850

seq1  GAGAAAAATATTAATCTAAGTTGCATAGCATGAAGATTTTGTTTATATGG  899
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GAGAAAAATATTAATCTAAGTTGCATAGCATGAAGA-TTTGTTTATATGG  899

seq1  TAAAGTCATTATTTGAAAGACTTCAATTATGTTTATTGAAATTTTAAGTA  949
      | ||||||||||||| ||||||||||||||||||||||||||||| ||||
seq2  T-AAGTCATTATTTG-AAGACTTCAATTATGTTTATTGAAATTTT-AGTA  946

seq1  AATAAGCT-GGAACATTGCAGTTGAGTTAGGCTGCTGAGCATTATAGTGA  998
      ||| |||| ||||||||||||||||||   ||||||||||||||||||||
seq2  AAT-AGCTGGGAACATTGCAGTTGAGT--AGCTGCTGAGCATTATAGTGA  993

seq1  TAATTGATTGTATTTGACAGGATATTAAAAATCACCTAAACATAACTATT  1048
      | |||||||||| ||||||||||||  ||||||| || |||||| |||| 
seq2  T-ATTGATTGTA-TTGACAGGATAT--AAAATCA-CTTAACATACCTAT-  1037

seq1  TGTTGTGTATCTGTGTACATGTTTATATATGT-GCTAGGGCACATGTATG  1097
         |||||||| | || |||| |||||||||| |||||||| ||||||||
seq2  --GTGTGTATC-GGGTCCATG-TTATATATGTGGCTAGGGC-CATGTATG  1082

seq1  GAGTTGCATTGTA-TGTATATGAATAAGG  1125
      |   ||| ||||| ||| |||||||||||
seq2  GGACTGCCTTGTAGTGT-TATGAATAAGG  1110