BAC Information

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BAC

Clone NameB6Ng01-121P08
Chromosome12 (Build37)
Map Location 10,113,505 - 10,114,558
singlet/doubletsinglet
Overlap geneLOC382567
Upstream geneLOC633030, LOC100042238, Osr1
Downstream geneNt5c1b, Rdh14, LOC238074, LOC100042308, EG668435, Kcns3, LOC628276
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-121P08.bB6Ng01-121P08.g
ACCDH925509DH925510
length1,1091,047
definitionDH925509|Mus musculus domesticus DNA, BAC clone: B6Ng01-121P08, 5' end.DH925510|Mus musculus domesticus DNA, BAC clone: B6Ng01-121P08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccaagacttttatcatgattgggtggtggattttg
tcaaatgatttcgccacatctaacaagatgatcatgtggtttttgtcttt
cagtttgttcatatagtgaattatgttgatggatttctgtatattaaaca
gtccctgcatccctggaatgaaacctacttggttaggatagacgattgtt
ttgatgtgttcttggattcggttagtgagaattttattgaggatttttgc
attgatattcatgagggaaattgggtctttctgtgatttaggtatcagag
taattgtggcttcatagaatgaattggatagagtccttctgcttctattt
tggggaatagtttgtgaagtactggaattagatcttatttgaaggtctga
tagaactctgcactaaatccatctggtcctgggctttttttggttgggag
acaattaatgactgcttctatttctttaggggttataggactgtttagat
cattaacctgatcctgatttaactttggtacctggtatctgtctaggaat
ttgtccatttcatccaggttttccagttttgttgagtatagccttttgta
gaaggatctgatggtgttttggatttcttcagtatcatttgttatgtctc
ccttttcattcctgattttgttaattaggattctgtccctgtgccctcta
gtaagtctggttaatggtttatctatcttgttgattttctcaaagaacca
gctcctcctttggttgattctttgaatagttcttatttccagttggttga
tttcacccctgagtttgattatttcctgccgtctactcctcttgagtgaa
tttgctttcttaggttctaaagctttaggtgtgttgtcaagctgctagtg
tgtgctctctctagtttctttttggaggcactcagagctatgagttttcc
tctagaaatgcttcattggtgtcccataagtttgggtatgtggggcttca
tttcataaccttgaaagtcttatttctttccttattctccttgaccaggt
atcatgtaaagaggttgttcatttccactgaatatggcatccttatataa
ggtgtaata
gaattccattccctttggttaaaacatttctgtgtcttttggtatatttt
tatagataagaagtggcagtttatatttttggcatccaggtagtttaagt
ttctacaaccactctgctgaaatacatctaacatttccagataaggatgc
tcatttttgttattttgtgacaactgctgctctaagtgaaactctggaac
tctaagtgaattttgtgagtgttgcttcttcatgttttctgactctttgg
actctatatattgaacataaactatgtgtatcctagcagttgttctaaat
cctgagggggagattttgacattaagaagtttaaaggaaagaaaatccac
aaatgggcaattttgttttgcaagctcagggtatagtggcaagtccttaa
ggaaaggtagaaactgtaggagaatatttccacaagagagacttgtcact
ctgacacaggaaaccctgtgatactgtctgaaatagaaagtgagaatgaa
tgaatgataaaatgaaaggctatgatgtccattatttagtgatggataat
gtgagaattaggtgccaaggagaagctttggcctaaagaggcggtctgag
gaaggggtgtttgggagcagtggaagatgactcaaagtcgatcatgagta
caactgacagctttgtagtatgttcaagatggctccctagacaatcctct
gtagatagctcttagctttgtagtctgctcaagctagatttctgcttgag
acagttctctctgcttggaaatctcatgctagaaaaaaaattctaaaagc
tctctggctaactcattgggttttccaacaaatgtcagaaaagctgcttt
aaaaaattcgtgggatttctgaacaggtaaaaaatatatgtctctctctc
tctccctctctctctctacagcagttctcactgggttgctctctcttata
gccaaagtgttttatttacatattattcagtcattactcaggtcccttta
agttatcccatttatcagcattttatgaccctagccacttgattctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_10113505_10114558
seq2: B6Ng01-121P08.g_67_1113

seq1  GAATTCCATTCCCTTTGGTTAAAACATTTCTGTGTCTTTTGGTATATTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTCCCTTTGGTTAAAACATTTCTGTGTCTTTTGGTATATTTT  50

seq1  TATAGATAAGAAGTGGCAGTTTATATTTTTGGCATCCAGGTAGTTTAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGATAAGAAGTGGCAGTTTATATTTTTGGCATCCAGGTAGTTTAAGT  100

seq1  TTCTACAACCACTCTGCTGAAATACATCTAACATTTCCAGATAAGGATGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACAACCACTCTGCTGAAATACATCTAACATTTCCAGATAAGGATGC  150

seq1  TCATTTTTGTTATTTTGTGACAACTGCTGCTCTAAGTGAAACTCTGGAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTTGTTATTTTGTGACAACTGCTGCTCTAAGTGAAACTCTGGAAC  200

seq1  TCTAAGTGAATTTTGTGAGTGTTGCTTCTTCATGTTTTCTGACTCTTTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGTGAATTTTGTGAGTGTTGCTTCTTCATGTTTTCTGACTCTTTGG  250

seq1  ACTCTATATATTGAACATAAACTATGTGTATCCTAGCAGTTGTTCTAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTATATATTGAACATAAACTATGTGTATCCTAGCAGTTGTTCTAAAT  300

seq1  CCTGAGGGGGAGATTTTGACATTAAGAAGTTTAAAGGAAAGAAAATCCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGGGGGAGATTTTGACATTAAGAAGTTTAAAGGAAAGAAAATCCAC  350

seq1  AAATGGGCAATTTTGTTTTGCAAGCTCAGGGTATAGTGGCAAGTCCTTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGGCAATTTTGTTTTGCAAGCTCAGGGTATAGTGGCAAGTCCTTAA  400

seq1  GGAAAGGTAGAAACTGTAGGAGAATATTTCCACAAGAGAGACTTGTCACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGGTAGAAACTGTAGGAGAATATTTCCACAAGAGAGACTTGTCACT  450

seq1  CTGACACAGGAAACCCTGTGATACTGTCTGAAATAGAAAGTGAGAATGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACACAGGAAACCCTGTGATACTGTCTGAAATAGAAAGTGAGAATGAA  500

seq1  TGAATGATAAAATGAAAGGCTATGATGTCCATTATTTAGTGATGGATAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGATAAAATGAAAGGCTATGATGTCCATTATTTAGTGATGGATAAT  550

seq1  GTGAGAATTAGGTGCCAAGGAGAAGCTTTGGCCTAAAGAGGCGGTCTGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGAATTAGGTGCCAAGGAGAAGCTTTGGCCTAAAGAGGCGGTCTGAG  600

seq1  GAAGGGGTGTTTGGGAGCAGTGGAAGATGACTCAAAGTCGATCATGAGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGGTGTTTGGGAGCAGTGGAAGATGACTCAAAGTCGATCATGAGTA  650

seq1  CAACTGACAGCTTTGTAGTATGTTCAAGATGGCTCCCTAGACAATCCTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTGACAGCTTTGTAGTATGTTCAAGATGGCTCCCTAGACAATCCTCT  700

seq1  GTAGATAGCTCTTAGCTTTGTAGTCTGCTCAAGCTAGATTTCTGCTTGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGATAGCTCTTAGCTTTGTAGTCTGCTCAAGCTAGATTTCTGCTTGAG  750

seq1  ACAGTTCTCTCTGCTTGAAAATCTCATGCTAGAAAAAAAATTCTAAAAGC  800
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  ACAGTTCTCTCTGCTTGGAAATCTCATGCTAGAAAAAAAATTCTAAAAGC  800

seq1  TCTCTGGCTAACTCA-TGGGTTTTCCAACAAATGTCAGAAAAGCTGCTTT  849
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TCTCTGGCTAACTCATTGGGTTTTCCAACAAATGTCAGAAAAGCTGCTTT  850

seq1  AAAAAATTCGTGGATTTTCTGAACAAGTAAAAAATATATGTCTCTCTCTC  899
      |||||||||||||  |||||||||| ||||||||||||||||||||||||
seq2  AAAAAATTCGTGGGATTTCTGAACAGGTAAAAAATATATGTCTCTCTCTC  900

seq1  TCTCCCTCTCTCTCTCTACAAGCAGTTCTCACTGGGTTGCTCTCTCTTAT  949
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TCTCCCTCTCTCTCTCTAC-AGCAGTTCTCACTGGGTTGCTCTCTCTTAT  949

seq1  AAGCCAAAGGTGTTTTATTTACATATTAATTCAGTCATTTACTCCAGGTT  999
       ||||||| |||||||||||||||||| ||||||||| ||||| ||||| 
seq2  -AGCCAAA-GTGTTTTATTTACATATT-ATTCAGTCA-TTACT-CAGGT-  993

seq1  CCCTTTTAAATTATCCCATTAATCAGCATTTTATGACCCTAGCCACTTGA  1049
       || ||||| |||||||||| |||||||||||||||||||||||||||||
seq2  -CCCTTTAAGTTATCCCATTTATCAGCATTTTATGACCCTAGCCACTTGA  1042

seq1  TTCTT  1054
      |||||
seq2  TTCTT  1047