BAC Information

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BAC

Clone NameB6Ng01-122D20
Chromosome12 (Build37)
Map Location 8,697,732 - 8,698,842
singlet/doubletsinglet
Overlap genePum2
Upstream geneEG668388, Apob, 1110057K04Rik, Gdf7, Hs1bp3, BC106175, Rhob, Slc7a15, LOC100043154
Downstream geneF730043H23, Sdc1, Laptm4a, Matn3, Wdr35, Ttc32, LOC633030, LOC100042238, Osr1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-122D20.bB6Ng01-122D20.g
ACCDH925715DH925716
length1,0861,024
definitionDH925715|Mus musculus domesticus DNA, BAC clone: B6Ng01-122D20, 5' end.DH925716|Mus musculus domesticus DNA, BAC clone: B6Ng01-122D20, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttggatatctatcctttgtattcagcattgtatgaaatatctat
tttacttttattcttataataatgagaatgtgtaaagctatcttaccagt
atcacgcctaacaaaatttgttttcacaaagcattttgtatttggttgtg
agaatcaaaattcaaacacagcttacccactttagaattttcactttgta
gatgtattagtgaaatcagttgatgtctaccttacctgcacattctggat
ttgttagtttcttaatgtatctattttttttttattctcaagttcctgct
aaagtttaggcttgggctcttttgattttagtcatgattctttataatgg
gtggcactatttcaaactacattaattatacagtgaggcttatgtcttgt
tctgctttttggggtggtgagattttaatttattttaaaacatttgtttt
gatgtgggtgcatatctgccatgagagcatgtagaggttggggcaacttg
tagtgattggttccctctctctcatgtgggtcctggagatcttgaactca
ggtcttcagggttctatttctgagccattatgccagattgatgcggtttt
aaattagaaaacaacagcagcttagaaatactgttattttgatggaaaaa
tatatcttgtatctgacaagattttgatcacctttttgtggtatcccagt
agttatctgaagtaggccatcctcattaccgtctcaatgatctgacttca
cagactattggcatattggaagctagcattaacctccatcgaagtatgtt
ggttctgtagtatttttttccaaatgaatgtttcatgagcattattttgt
ttttcaaataaagcaatggaagaatgaatgccttgtaatatgaaagactt
tgtaatgacagtttactggttttttcccagatgggtttaatggagacata
tttccatatgtagaagaatatctactttactcctgaggtatcttcagaag
attaatctaggagctaacgatcttaatagaaatatttgataggttttatc
aggcagggtgggctgaaataaaatttagtagatgat
gaattcaaagcagctaaagaacctgagggcaggccgtgcctgaagtcata
aaggagcagagacgcgtcccacaattccacaggctatgctgactcgttcc
aacatgtgggggaaatacgatagcacctagatcaaaagcagaggcttttt
agccaatttaagctccttaaagcaaatttaggcctgtcccttctccctac
tgccttcttaaaaatgcaactgccccctaaaagtgatagattacatacat
cctctgcctgatggctgacctatgaaacccactgtctgggtctgatatgg
aaatgccaccagcacataggtagatgggagaacccccagtatatgccagt
gacacagaaccaaaggatgtgtatatataaagagatgtcttcaaaaatac
ttacttgcccgcgccattatgaagactgatgtaaaggttaatgctatcaa
cttgacaagacctactaacagataaagcctctgggcatgtctgtgcagag
taggggtgagggtgttatattcctagatcacgttaattgaattgggaaga
ccttccctaaagagtgggcaacaccattccccaggccacaatctcagatt
gcattaaaaagcagaaagtctggcttgctcagccgtttaagatatagttc
tgctcttctggaggacctgggtttggtctcaacacctaacatcagatggc
tcacaatcagctgtaactctagctacagggggatctaaaggacctcatct
ggcttcctcaggcactctcactaacacacagaaatgtgcacatacaccta
cactaataataaaaatcaatttttcttttaaaaagaaaaagcaacgagtt
accattttcttcctcctcctgacttaggtggaccatggccgcccagctgt
cttgcttctgcattgtgactccgcctgctgtagcagactgtgtcctctct
aactagggagcccaaataggcctggtgtggttgctcctactggggtattg
gtcaaagcgaggagaaaagcaaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_8697732_8698842
seq2: B6Ng01-122D20.b_44_1129

seq1  GAATTCTTGGATATCTATCCTTTGTATTCAGCATTGTATGAAATATCTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGGATATCTATCCTTTGTATTCAGCATTGTATGAAATATCTAT  50

seq1  TTTACTTTTATTCTTATAATAATGAGAATGTGTAAAGCTATCTTACCAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTTTTATTCTTATAATAATGAGAATGTGTAAAGCTATCTTACCAGT  100

seq1  ATCACGCCTAACAAAATTTGTTTTCACAAAGCATTTTGTATTTGGTTGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACGCCTAACAAAATTTGTTTTCACAAAGCATTTTGTATTTGGTTGTG  150

seq1  AGAATCAAAATTCAAACACAGCTTACCCACTTTAGAATTTTCACTTTGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCAAAATTCAAACACAGCTTACCCACTTTAGAATTTTCACTTTGTA  200

seq1  GATGTATTAGTGAAATCAGTTGATGTCTACCTTACCTGCACATTCTGGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTATTAGTGAAATCAGTTGATGTCTACCTTACCTGCACATTCTGGAT  250

seq1  TTGTTAGTTTCTTAATGTATCTATTTTTTTTTTATTCTCAAGTTCCTGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTAGTTTCTTAATGTATCTATTTTTTTTTTATTCTCAAGTTCCTGCT  300

seq1  AAAGTTTAGGCTTGGGCTCTTTTGATTTTAGTCATGATTCTTTATAATGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTTAGGCTTGGGCTCTTTTGATTTTAGTCATGATTCTTTATAATGG  350

seq1  GTGGCACTATTTCAAACTACATTAATTATACAGTGAGGCTTATGTCTTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCACTATTTCAAACTACATTAATTATACAGTGAGGCTTATGTCTTGT  400

seq1  TCTGCTTTTTGGGGTGGTGAGATTTTAATTTATTTTAAAACATTTGTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTTTTTGGGGTGGTGAGATTTTAATTTATTTTAAAACATTTGTTTT  450

seq1  GATGTGGGTGCATATCTGCCATGAGAGCATGTAGAGGTTGGGGCAACTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGGGTGCATATCTGCCATGAGAGCATGTAGAGGTTGGGGCAACTTG  500

seq1  TAGTGATTGGTTCCCTCTCTCTCATGTGGGTCCTGGAGATCTTGAACTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGATTGGTTCCCTCTCTCTCATGTGGGTCCTGGAGATCTTGAACTCA  550

seq1  GGTCTTCAGGGTTCTATTTCTGAGCCATTATGCCAGATTGATGCGGTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTTCAGGGTTCTATTTCTGAGCCATTATGCCAGATTGATGCGGTTTT  600

seq1  AAATTAGAAAACAACAGCAGCTTAGAAATACTGTTATTTTGATGGAAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAGAAAACAACAGCAGCTTAGAAATACTGTTATTTTGATGGAAAAA  650

seq1  TATATCTTGTATCTGACAAGATTTTGATCACCTTTTTGTGGTATCCCAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCTTGTATCTGACAAGATTTTGATCACCTTTTTGTGGTATCCCAGT  700

seq1  AGTTATCTGAAGTAGGCCATCCTCATTACCGTCTCAATGATCTGACTTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATCTGAAGTAGGCCATCCTCATTACCGTCTCAATGATCTGACTTCA  750

seq1  CAGACTATTGGCATATTGGAAGCTAGCATTAACCTCCATCGAAGTATGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTATTGGCATATTGGAAGCTAGCATTAACCTCCATCGAAGTATGTT  800

seq1  GGTTCTGTAGTATTTTTTTCCAAAATGAATGTTTCATGAGCATTATTTTG  850
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GGTTCTGTAGTATTTTTTTCC-AAATGAATGTTTCATGAGCATTATTTTG  849

seq1  TTTTTCAAATAAAGCAATGGAAAGAATGAATGCCTTGTAATATGAAAGAC  900
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TTTTTCAAATAAAGCAATGG-AAGAATGAATGCCTTGTAATATGAAAGAC  898

seq1  TTTGTAATGACAGTTTACTGGTTTTTTTCCCAAGATGGGTTTTAGTGGAA  950
      |||||||||||||||||||||||||||  || ||||||| |||| ||| |
seq2  TTTGTAATGACAGTTTACTGGTTTTTT--CCCAGATGGG-TTTAATGG-A  944

seq1  GACATATTTCCATATGTAGAAGAATATCTTACTTTACCTCCTTGAGGTAA  1000
      |||||||||||||||||||||||||||| ||||||| |||| |||||| |
seq2  GACATATTTCCATATGTAGAAGAATATC-TACTTTA-CTCC-TGAGGT-A  990

seq1  TCTTCAAGAAGATTTAATCTTAAGGAGCTAAAACGATCTTATATAGAAAT  1050
      ||||| |||||| |||||||  |||||||  |||||||||| ||||||||
seq2  TCTTC-AGAAGA-TTAATCT--AGGAGCT--AACGATCTTA-ATAGAAAT  1033

seq1  ATTTGATAGGTTTTTATTCAGTGACAGTGGTGGGCTGGAATAAAATATTT  1100
      ||||||||||||||   |||  | ||| ||||||||| |||||||   ||
seq2  ATTTGATAGGTTTT--ATCA--GGCAG-GGTGGGCTGAAATAAAA---TT  1075

seq1  AATTAGATGAT  1111
       | ||||||||
seq2  TAGTAGATGAT  1086