BAC Information

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BAC

Clone NameB6Ng01-123A12
Chromosome12 (Build37)
Map Location 9,847,369 - 9,972,933
singlet/doubletdoublet
Overlap genenone
Upstream geneLaptm4a, Matn3, Wdr35, Ttc32, LOC633030, LOC100042238, Osr1
Downstream geneLOC382567, Nt5c1b, Rdh14, LOC238074, LOC100042308, EG668435
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-123A12.bB6Ng01-123A12.g
ACCDH926307DH926308
length952688
definitionDH926307|Mus musculus domesticus DNA, BAC clone: B6Ng01-123A12, 5' end.DH926308|Mus musculus domesticus DNA, BAC clone: B6Ng01-123A12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(9,972,241 - 9,972,933)(9,847,369 - 9,848,057)
sequence
gaattccgttggttagaaagggaacaggaaaagaaaaaaagacacagaga
aaagggctcatcacaggcattcaatattgctttaagatagggaaaaagaa
tataaaggaaacagtcagtattgccaaattctattgtaaaaagttacaat
gaaaggtttagtaactgtgaaggcaagatgagcaccatacaaggggaggc
agttctatgttagccctctttatttcactgacatagaaatatacttgact
aaaacaagggttgccttcagcttagactttgagggtgcaatccaccatag
caaggaaggcatggtgttggcaagacttgactgatcacattgcatttgta
gtgagggagctgaaaaactgtgctggtactcagctccctttctcccttct
actcctgggatgacaggctgtggaatagcgctgtccacatttagggtggg
acttttaagtcaaacctttttaaaagtatccttggacatacactcaaagg
tatgttgccagtgggggttcatttttggtttttggttttttttttcctca
ttgctatcgtcatcatcatcattgcttatttcctttaatccttctcactg
cccccctcatgctcatcttcttccatagtacttccctccattcccttctt
ctctgagtggtgggggaggtccccaggggtatactcccaccctggcacat
taagcctctgtgaaactaggtaaatcctcttccctttaagccagacaaga
aagctgagatagaagaacatattccatagacaggcaacagttttggggat
agtcccttctccagttgtttgagacccatataaagaccaagctacacatc
cgctacatatgatcaggaaggcctaggtccagcctgtgtatgttcttggg
ttggtggtttatatctgagagctccaacagtccagtttagttgactttgt
tt

gaattctccaaaaaggcgattttaaaaatgcattttcagaggaataaaga
ctgccagggaatatcaagcatcctctggggtttggctgagagagaaacac
tgagaatgataaaacagaagtgaggaatagatagatccttccatgtccaa
ggacaaacagaaaacttctctgtaaagaagtctcctggggagtcttccca
ctgtgaaattactgaccttagtgtcatggttatagttcgaaagttatatt
ttttccttacagaaaattaaacttaagtttcacagaactaggatatgtaa
aaggattaaattctcagaacagtcagtgcatgtctaagatctaattccag
tagtaaatattataattctatatactgctgctgctgctgctgctgctgat
actactactattttcagaataaagctggatatttatgcattggtttactg
ttctcttttgtgaataataagcaacgtctacaaggtatatttaatgtctt
gacattgaaacgtttcatcttcacttaaatgttcatgaacaagaattata
caatgaaagtataaaaatagatggatctttgaatttaaggccagcatggt
ctatggagtgagttccaggccagcgagggctacaaagaggaaaccctgtc
ttgaaaaaccaataatatatatgtgtgtgttgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_9972241_9972933
seq2: B6Ng01-123A12.b_46_738 (reverse)

seq1  AGGGTGGGAGTATACCCCTGGGGACCTCCCCCACCACTCAGAGAAGAAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTGGGAGTATACCCCTGGGGACCTCCCCCACCACTCAGAGAAGAAGG  50

seq1  GAATGGAGGGAAGTACTATGGAAGAAGATGAGCATGAGGGGGGCAGTGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGAGGGAAGTACTATGGAAGAAGATGAGCATGAGGGGGGCAGTGAG  100

seq1  AAGGATTAAAGGAAATAAGCAATGATGATGATGACGATAGCAATGAGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATTAAAGGAAATAAGCAATGATGATGATGACGATAGCAATGAGGAA  150

seq1  AAAAAAAACCAAAAACCAAAAATGAACCCCCACTGGCAACATACCTTTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAACCAAAAACCAAAAATGAACCCCCACTGGCAACATACCTTTGA  200

seq1  GTGTATGTCCAAGGATACTTTTAAAAAGGTTTGACTTAAAAGTCCCACCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATGTCCAAGGATACTTTTAAAAAGGTTTGACTTAAAAGTCCCACCC  250

seq1  TAAATGTGGACAGCGCTATTCCACAGCCTGTCATCCCAGGAGTAGAAGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGTGGACAGCGCTATTCCACAGCCTGTCATCCCAGGAGTAGAAGGG  300

seq1  AGAAAGGGAGCTGAGTACCAGCACAGTTTTTCAGCTCCCTCACTACAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGGGAGCTGAGTACCAGCACAGTTTTTCAGCTCCCTCACTACAAAT  350

seq1  GCAATGTGATCAGTCAAGTCTTGCCAACACCATGCCTTCCTTGCTATGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATGTGATCAGTCAAGTCTTGCCAACACCATGCCTTCCTTGCTATGGT  400

seq1  GGATTGCACCCTCAAAGTCTAAGCTGAAGGCAACCCTTGTTTTAGTCAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTGCACCCTCAAAGTCTAAGCTGAAGGCAACCCTTGTTTTAGTCAAG  450

seq1  TATATTTCTATGTCAGTGAAATAAAGAGGGCTAACATAGAACTGCCTCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTCTATGTCAGTGAAATAAAGAGGGCTAACATAGAACTGCCTCCC  500

seq1  CTTGTATGGTGCTCATCTTGCCTTCACAGTTACTAAACCTTTCATTGTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTATGGTGCTCATCTTGCCTTCACAGTTACTAAACCTTTCATTGTAA  550

seq1  CTTTTTACAATAGAATTTGGCAATACTGACTGTTTCCTTTATATTCTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTACAATAGAATTTGGCAATACTGACTGTTTCCTTTATATTCTTTT  600

seq1  TCCCTATCTTAAAGCAATATTGAATGCCTGTGATGAGCCCTTTTCTCTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTATCTTAAAGCAATATTGAATGCCTGTGATGAGCCCTTTTCTCTGT  650

seq1  GTCTTTTTTTCTTTTCCTGTTCCCTTTCTAACCAACGGAATTC  693
      |||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTTTTTCTTTTCCTGTTCCCTTTCTAACCAACGGAATTC  693


seq1: chr12_9847369_9848057
seq2: B6Ng01-123A12.g_67_754

seq1  GAATTCTCCAAAAAGGCGATTTTAAAAATGCATTTTCAGAGGAATAAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCAAAAAGGCGATTTTAAAAATGCATTTTCAGAGGAATAAAGA  50

seq1  CTGCCAGGGAATATCAAGCATCCTCTGGGGTTTGGCTGAGAGAGAAACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCAGGGAATATCAAGCATCCTCTGGGGTTTGGCTGAGAGAGAAACAC  100

seq1  TGAGAATGATAAAACAGAAGTGAGGAATAGATAGATCCTTCCATGTCCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAATGATAAAACAGAAGTGAGGAATAGATAGATCCTTCCATGTCCAA  150

seq1  GGACAAACAGAAAACTTCTCTGTAAAGAAGTCTCCTGGGGAGTCTTCCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAAACAGAAAACTTCTCTGTAAAGAAGTCTCCTGGGGAGTCTTCCCA  200

seq1  CTGTGAAATTACTGACCTTAGTGTCATGGTTATAGTTCGAAAGTTATATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGAAATTACTGACCTTAGTGTCATGGTTATAGTTCGAAAGTTATATT  250

seq1  TTTTCCTTACAGAAAATTAAACTTAAGTTTCACAGAACTAGGATATGTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTTACAGAAAATTAAACTTAAGTTTCACAGAACTAGGATATGTAA  300

seq1  AAGGATTAAATTCTCAGAACAGTCAGTGCATGTCTAAGATCTAATTCCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATTAAATTCTCAGAACAGTCAGTGCATGTCTAAGATCTAATTCCAG  350

seq1  TAGTAAATATTATAATTCTATATACTGCTGCTGCTGCTGCTGCTGCTGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAAATATTATAATTCTATATACTGCTGCTGCTGCTGCTGCTGCTGAT  400

seq1  ACTACTACTATTTTCAGAATAAAGCTGGATATTTATGCATTGGTTTACTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACTACTATTTTCAGAATAAAGCTGGATATTTATGCATTGGTTTACTG  450

seq1  TTCTCTTTTGTGAATAATAAGCAACGTCTACAAGGTATATTTAATGTCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTTTTGTGAATAATAAGCAACGTCTACAAGGTATATTTAATGTCTT  500

seq1  GACATTGAAACGTTTCATCTTCACTTAAATGTTCATGAACAAGAATTATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTGAAACGTTTCATCTTCACTTAAATGTTCATGAACAAGAATTATA  550

seq1  CAATGAAAGTATAAAAATAGATGGATCTTTGAATTTAAGGCCAGCATGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGAAAGTATAAAAATAGATGGATCTTTGAATTTAAGGCCAGCATGGT  600

seq1  CTATGGAGTGAGTTCCAGGCCAGCGAGGGCTACAAAGAGGAAACCCTGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGGAGTGAGTTCCAGGCCAGCGAGGGCTACAAAGAGGAAACCCTGTC  650

seq1  TTGAAAAACCAATAATATATATGTGTGTGTGTGTGTGTG  689
      |||||||||||||||||||||||||||||| ||||||||
seq2  TTGAAAAACCAATAATATATATGTGTGTGT-TGTGTGTG  688


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