BAC Information

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BAC

Clone NameB6Ng01-123E14
Chromosome12 (Build37)
Map Location 75,553,857 - 75,650,615
singlet/doubletdoublet
Overlap genenone
Upstream geneTmem30b, 2210039B01Rik, Prkch, EG666385, LOC100041489, Hif1a, EG277089, Snapc1, Syt16, 1700086L19Rik, Dbpht2, LOC671971
Downstream geneKcnh5, Rhoj, Gphb5, Ppp2r5e
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-123E14.bB6Ng01-123E14.g
ACCDH926493DH926494
length708783
definitionDH926493|Mus musculus domesticus DNA, BAC clone: B6Ng01-123E14, 5' end.DH926494|Mus musculus domesticus DNA, BAC clone: B6Ng01-123E14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(75,553,857 - 75,554,564)(75,649,936 - 75,650,615)
sequence
gaattcacttctttcaaaaagtaactactcactgtacagagcattcagag
taccctatcacctagcctagacaggaacagggcagggcccatctactgca
ggggtttcagatcccctggggccgtggtcctcaacttgtgggctacaaca
tctttggcgaacctctacctccaaaaatatttacataatgattcacaaca
gtagcaaaattgcagttatggggtagccacaaaaataattttatggttgg
ggtaagagtcatggatgagaaccactgctgtagaggtgcctccagaggca
gaggtgagtggagagcagggctggacagcgccggggtgggagagacccag
tcacttgtattgtgttgttggggtttccactcaggggcaagaaagcaaaa
tactagcagtgcagtgaagctgggtttttaaagctgagtttctgtaagtc
tgtgattgcttccccactgctgttagcgttcttgccctatgtcagcatca
gatttacaaaactggtcctgggaagtatggggcggctgaagacctcctcc
gtaccattagagacgttgggtctccacagttagcacatggaggaacagga
cacctcgaaagacggaaaagggaatggtagctaaactgagcaggcctggt
gccatctcctgcatttctgatgagtttctccttttggagagagaggtggg
gtggggta
gaattccaaatgcatatttttggaagtttcctttcatgctgcctatgttt
agatttgaggttaaaaattaaatgtatttttatatttaaaattgtaatca
atcttttaatttggatgagtcagagctcaatgatatttccatttaaaaat
ttaagaatttcttaaacacagaaaccgcacattttaaagtgacaatctac
acataatgggggatatgtagtgtttgaatttctgagtctgagttacctta
ctcactgtaatatttccagttccatccattttcctacaactttaataata
ttttttatttgtagctaaaaagcatcctatgtgtatatgaaccacagttt
aaaaatatccttgcatcagttgatggacatctagactgcttccatttcta
agctattgtgattggaaaatcaatgagcatgggaaggcttctccatcaga
gattatggagaatatgcctaggggtaacactgatgggttacatggtatat
atttgcttccacactgatttgcatagtgatacttctggtttatactctca
ccaacagtgaataagtattcaccattccccacatctgtagatctctagag
gccaagaatggagtcatgagatggggagaaaaagtccttaagtgactgag
acctaaaataataaaaggagacatacaggtagagtggtgggatacatagc
atggaaagggttaaccagtgacagagtaggaagatgggaggaaaatggtt
atctggggtgtgagggggaacaagaaaaatata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_75553857_75554564
seq2: B6Ng01-123E14.b_46_753

seq1  GAATTCACTTCTTTCAAAAAGTAACTACTCACTGTACAGAGCATTCAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTCTTTCAAAAAGTAACTACTCACTGTACAGAGCATTCAGAG  50

seq1  TACCCTATCACCTAGCCTAGACAGGAACAGGGCAGGGCCCATCTACTGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCTATCACCTAGCCTAGACAGGAACAGGGCAGGGCCCATCTACTGCA  100

seq1  GGGGTTTCAGATCCCCTGGGGCCGTGGTCCTCAACTTGTGGGCTACAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTTTCAGATCCCCTGGGGCCGTGGTCCTCAACTTGTGGGCTACAACA  150

seq1  TCTTTGGCGAACCTCTACCTCCAAAAATATTTACATAATGATTCACAACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGGCGAACCTCTACCTCCAAAAATATTTACATAATGATTCACAACA  200

seq1  GTAGCAAAATTGCAGTTATGGGGTAGCCACAAAAATAATTTTATGGTTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCAAAATTGCAGTTATGGGGTAGCCACAAAAATAATTTTATGGTTGG  250

seq1  GGTAAGAGTCATGGATGAGAACCACTGCTGTAGAGGTGCCTCCAGAGGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAGAGTCATGGATGAGAACCACTGCTGTAGAGGTGCCTCCAGAGGCA  300

seq1  GAGGTGAGTGGAGAGCAGGGCTGGACAGCGCCGGGGTGGGAGAGACCCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTGAGTGGAGAGCAGGGCTGGACAGCGCCGGGGTGGGAGAGACCCAG  350

seq1  TCACTTGTATTGTGTTGTTGGGGTTTCCACTCAGGGGCAAGAAAGCAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTGTATTGTGTTGTTGGGGTTTCCACTCAGGGGCAAGAAAGCAAAA  400

seq1  TACTAGCAGTGCAGTGAAGCTGGGTTTTTAAAGCTGAGTTTCTGTAAGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAGCAGTGCAGTGAAGCTGGGTTTTTAAAGCTGAGTTTCTGTAAGTC  450

seq1  TGTGATTGCTTCCCCACTGCTGTTAGCGTTCTTGCCCTATGTCAGCATCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATTGCTTCCCCACTGCTGTTAGCGTTCTTGCCCTATGTCAGCATCA  500

seq1  GATTTACAAAACTGGTCCTGGGAAGTATGGGGCGGCTGAAGACCTCCTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTACAAAACTGGTCCTGGGAAGTATGGGGCGGCTGAAGACCTCCTCC  550

seq1  GTACCATTAGAGACGTTGGGTCTCCACAGTTAGCACATGGAGGAACAGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCATTAGAGACGTTGGGTCTCCACAGTTAGCACATGGAGGAACAGGA  600

seq1  CACCTCGAAAGACGGAAAAGGGAATGGTAGCTAAACTGAGCAGGCCTGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTCGAAAGACGGAAAAGGGAATGGTAGCTAAACTGAGCAGGCCTGGT  650

seq1  GCCATCTCCTGCATTTCTGATGAGTTTCTCCTTTTGGAGAGAGAGGTGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATCTCCTGCATTTCTGATGAGTTTCTCCTTTTGGAGAGAGAGGTGGG  700

seq1  GTGGGGTA  708
      ||||||||
seq2  GTGGGGTA  708

seq1: chr12_75649936_75650615
seq2: B6Ng01-123E14.g_67_746 (reverse)

seq1  ACCTGTATGTCTCCTTTTATTATTTTAGGTCTCAGTCACTTAAGGACTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTATGTCTCCTTTTATTATTTTAGGTCTCAGTCACTTAAGGACTTT  50

seq1  TTCTCCCCATCTCATGACTCCATTCTTGGCCTCTAGAGATCTACAGATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCCCATCTCATGACTCCATTCTTGGCCTCTAGAGATCTACAGATGT  100

seq1  GGGGAATGGTGAATACTTATTCACTGTTGGTGAGAGTATAAACCAGAAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAATGGTGAATACTTATTCACTGTTGGTGAGAGTATAAACCAGAAGT  150

seq1  ATCACTATGCAAATCAGTGTGGAAGCAAATATATACCATGTAACCCATCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTATGCAAATCAGTGTGGAAGCAAATATATACCATGTAACCCATCA  200

seq1  GTGTTACCCCTAGGCATATTCTCCATAATCTCTGATGGAGAAGCCTTCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTACCCCTAGGCATATTCTCCATAATCTCTGATGGAGAAGCCTTCCC  250

seq1  ATGCTCATTGATTTTCCAATCACAATAGCTTAGAAATGGAAGCAGTCTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTCATTGATTTTCCAATCACAATAGCTTAGAAATGGAAGCAGTCTAG  300

seq1  ATGTCCATCAACTGATGCAAGGATATTTTTAAACTGTGGTTCATATACAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCATCAACTGATGCAAGGATATTTTTAAACTGTGGTTCATATACAC  350

seq1  ATAGGATGCTTTTTAGCTACAAATAAAAAATATTATTAAAGTTGTAGGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGATGCTTTTTAGCTACAAATAAAAAATATTATTAAAGTTGTAGGAA  400

seq1  AATGGATGGAACTGGAAATATTACAGTGAGTAAGGTAACTCAGACTCAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGATGGAACTGGAAATATTACAGTGAGTAAGGTAACTCAGACTCAGA  450

seq1  AATTCAAACACTACATATCCCCCATTATGTGTAGATTGTCACTTTAAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCAAACACTACATATCCCCCATTATGTGTAGATTGTCACTTTAAAAT  500

seq1  GTGCGGTTTCTGTGTTTAAGAAATTCTTAAATTTTTAAATGGAAATATCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCGGTTTCTGTGTTTAAGAAATTCTTAAATTTTTAAATGGAAATATCA  550

seq1  TTGAGCTCTGACTCATCCAAATTAAAAGATTGATTACAATTTTAAATATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGCTCTGACTCATCCAAATTAAAAGATTGATTACAATTTTAAATATA  600

seq1  AAAATACATTTAATTTTTAACCTCAAATCTAAACATAGGCAGCATGAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATACATTTAATTTTTAACCTCAAATCTAAACATAGGCAGCATGAAAG  650

seq1  GAAACTTCCAAAAATATGCATTTGGAATTC  680
      ||||||||||||||||||||||||||||||
seq2  GAAACTTCCAAAAATATGCATTTGGAATTC  680