BAC Information

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BAC

Clone NameB6Ng01-123P16
Chromosome12 (Build37)
Map Location 50,754,699 - 50,755,783
singlet/doubletsinglet
Overlap genenone
Upstream geneGA_x5J8B7W54VK-284379-285078, Olfr1399-ps1, EG665036, LOC100039366, Foxg1, ENSMUSG00000045946, LOC100039424
Downstream geneLOC665071, LOC665077, LOC100039455, Prkcm
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-123P16.bB6Ng01-123P16.g
ACCDH927006DH927007
length1,0691,178
definitionDH927006|Mus musculus domesticus DNA, BAC clone: B6Ng01-123P16, 5' end.DH927007|Mus musculus domesticus DNA, BAC clone: B6Ng01-123P16, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgcttaaagcattaacatggtactgttgccacaacaaaccact
gcaaagaacagaagtatactttagaagtccagctaagaatccacagcttc
agaatgtgacactttgcgacattcctagttgttggaggtggtaaaaggtc
ataaaactgagaatttatctcacagattgaacttaacacagttcactaaa
aactggatgcgaagtgaaaattcaggaaaaaaagccgaacatctctaatg
atttggatctgagaaacttctaagaatcagtcttcatttatccacatcgc
aatactagggaagttcaagaagaaagagtttttgagtattactgaattcc
aggcagcatccatggtatgctgctatggctcttgatcttgatcatgtcac
taaatttacactctaatgcaaggcttccaaagcatgtccctcagcagtgt
caacgtgatttctacttatgctaaatttctttattaacgacatatttttg
actgtttcatgcatgtgcatggtgtaatcaatttttcatcccattctttt
tcacctctctctgaactctgttggccatctctttctccaacaaatctctt
ttcacattcatgattttgttttgttgaccactgaattcagctatccatta
gagcagtaattctcaatctgtgggttttgaaatttggggcgggggtcaca
tatcagatatcctgcataccaatatttacacttcaattcataacagtagc
aaaattacagttgtgaggtaacaaaaaaataatttttatggctgtggaac
accataacactataacactgaacctataagccagccccaattaaatgttg
tcttttataagacttgctttggtcatcatgactgttcacagcagtcaaac
cctaactagacagtaagaactgaatctggctcttctgtgagacaggtact
cttaaccactttacatccctatccctcctggtcaaccccccccatctcct
cccctctctcagagtgggtcaggagtgcctggtatccccacctgtcattc
agtctcaaagctaggcagg
gaattcataacaactaaacatcaagctcacatatagaaaattctttaaat
acttaacttggaagagaaagaaagacatctttcttcataagagtacacaa
aatgtatcctccatgaaagaattagatggacaaacaagacccaggaaata
actatctgtatctatcacaacaaataagcaggttcccaaaataaatatgg
gatttaaaaaaggaataccagcaattcagcaaaacacaccatcatccaac
aaatttaaaagaagcattaattctttagtaaccttaaatataaatgacct
caactaatgacaaacatgaagcagattagataacaaaacacatctatatg
ttgtctccaagaaacacatttagcttgcaaagatatcaaatagactcatt
atataaaagagaaaaaacaaattaccaaagaaatgggagccatagatcag
cagacatggctatgtctggtatagaatattccaaaccaaaactaagaagt
ggtaaacatgaatgaataaatactaatatatgttaattatgttaattaac
aaagagatcaatttctcaagaagataaaacatttgtaaatttttccatca
aagatgggattcctcagtttcatactggaaacactaaatatcataaactg
ccttatacaacaaaagacgggacttcatccttagataagtttttcaaact
aaaataaaccaagacagttcaaaatacaccattagtcaatgtggcttaag
ctacactgaatgtcctaaccaacctaggaaatacaaaccaagcttcagaa
aataaaaacaaataaattttcttgtgtgccatcagatcataatataataa
aagtgaaattagaaaagaaatttacagaaacttaaaaggaaatacttaca
gggtaaacaatacatttttggatgaatagtgggttatgcagacatcagag
atttaaaacttcctgagtcaatgagacgcatcttatcaaactacgagaat
acagcagggtagtactagaggaaatatttagctatactatcatatggacc
atctgagtatctcaatgacactaatgatgaatgtcactctcaggaaaaga
ggaagtagtagtaggagaatgaggatgagagctcacatacgagcaggaac
tgatccttaatatatgtgtaagcctcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_50754699_50755783
seq2: B6Ng01-123P16.b_50_1118

seq1  GAATTCCTGCTTAAAGCATTAACATGGTACTGTTGCCACAACAAACCACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGCTTAAAGCATTAACATGGTACTGTTGCCACAACAAACCACT  50

seq1  GCAAAGAACAGAAGTATACTTTAGAAGTCCAGCTAAGAATCCACAGCTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGAACAGAAGTATACTTTAGAAGTCCAGCTAAGAATCCACAGCTTC  100

seq1  AGAATGTGACACTTTGCGACATTCCTAGTTGTTGGAGGTGGTAAAAGGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGTGACACTTTGCGACATTCCTAGTTGTTGGAGGTGGTAAAAGGTC  150

seq1  ATAAAACTGAGAATTTATCTCACAGATTGAACTTAACACAGTTCACTAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAACTGAGAATTTATCTCACAGATTGAACTTAACACAGTTCACTAAA  200

seq1  AACTGGATGCGAAGTGAAAATTCAGGAAAAAAAGCCGAACATCTCTAATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGATGCGAAGTGAAAATTCAGGAAAAAAAGCCGAACATCTCTAATG  250

seq1  ATTTGGATCTGAGAAACTTCTAAGAATCAGTCTTCATTTATCCACATCGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGATCTGAGAAACTTCTAAGAATCAGTCTTCATTTATCCACATCGC  300

seq1  AATACTAGGGAAGTTCAAGAAGAAAGAGTTTTTGAGTATTACTGAATTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTAGGGAAGTTCAAGAAGAAAGAGTTTTTGAGTATTACTGAATTCC  350

seq1  AGGCAGCATCCATGGTATGCTGCTATGGCTCTTGATCTTGATCATGTCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGCATCCATGGTATGCTGCTATGGCTCTTGATCTTGATCATGTCAC  400

seq1  TAAATTTACACTCTAATGCAAGGCTTCCAAAGCATGTCCCTCAGCAGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTACACTCTAATGCAAGGCTTCCAAAGCATGTCCCTCAGCAGTGT  450

seq1  CAACGTGATTTCTACTTATGCTAAATTTCTTTATTAACGACATATTTTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACGTGATTTCTACTTATGCTAAATTTCTTTATTAACGACATATTTTTG  500

seq1  ACTGTTTCATGCATGTGCATGGTGTAATCAATTTTTCATCCCATTCTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTTCATGCATGTGCATGGTGTAATCAATTTTTCATCCCATTCTTTT  550

seq1  TCACCTCTCTCTGAACTCTGTTGGCCATCTCTTTCTCCAACAAATCTCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTCTCTCTGAACTCTGTTGGCCATCTCTTTCTCCAACAAATCTCTT  600

seq1  TTCACATTCATGATTTTGTTTTGTTGACCACTGAATTCAGCTATCCATTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACATTCATGATTTTGTTTTGTTGACCACTGAATTCAGCTATCCATTA  650

seq1  GAGCAGTAATTCTCAATCTGTGGGTTTTGAAATTTGGGGCGGGGGTCACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGTAATTCTCAATCTGTGGGTTTTGAAATTTGGGGCGGGGGTCACA  700

seq1  TATCAGATATCCTGCATACCAATATTTACACTTCAATTCATAACAGTAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGATATCCTGCATACCAATATTTACACTTCAATTCATAACAGTAGC  750

seq1  AAAATTACAGTTGTGAGGTAACAAAAAAATAATTTTTATGGCTGTGGAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTACAGTTGTGAGGTAACAAAAAAATAATTTTTATGGCTGTGGAAC  800

seq1  ACCATAACACTATAACACTGAACCTATAAGCCAGCCCCAATTAAATGTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATAACACTATAACACTGAACCTATAAGCCAGCCCCAATTAAATGTTG  850

seq1  TCTTTTATAAGACTTGCTTTGGTCATCATGACTGTTCACAGCAGTCAAAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTATAAGACTTGCTTTGGTCATCATGACTGTTCACAGCAGTCAAAC  900

seq1  CCTAACTAGACAGTAAGAACTGAATCTGGCTCTTCTGTGAGAACAGGTAC  950
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CCTAACTAGACAGTAAGAACTGAATCTGGCTCTTCTGTGAG-ACAGGTAC  949

seq1  TCTTAACCACTTTACATCCCTATCCCCTCCTGGTCAACCCCCCCCATCCT  1000
      ||||||||||||||||||||||| ||||||||||||||||||||||||  
seq2  TCTTAACCACTTTACATCCCTAT-CCCTCCTGGTCAACCCCCCCCATC--  996

seq1  CCCTCCCCTTCTCCTCAGAGTGGGTCAGGGAGGTGCCTGGGTATCCCCCA  1050
       ||||||| ||| ||||||||||||||||   |||||| |||||||||  
seq2  TCCTCCCC-TCT-CTCAGAGTGGGTCAGG--AGTGCCT-GGTATCCCC--  1039

seq1  CCCTGTCATTTCAAGTCTCCACAAGGCTAGGCAGG  1085
       |||||||||   |||||   ||| ||||||||||
seq2  ACCTGTCATT--CAGTCT---CAAAGCTAGGCAGG  1069