BAC Information

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BAC

Clone NameB6Ng01-124P05
Chromosome12 (Build37)
Map Location 36,989,984 - 36,991,073
singlet/doubletsinglet
Overlap genenone
Upstream geneAhr, LOC100043575, LOC629758, LOC100043579, LOC669866, Agr3, Agr2, Tspan13, EG432649, Bzw2, Ankmy2, 1700108M19Rik
Downstream geneSostdc1, 4930579E17Rik, LOC638858, Meox2, A530016O06Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-124P05.bB6Ng01-124P05.g
ACCDH927722DH927723
length1,0771,192
definitionDH927722|Mus musculus domesticus DNA, BAC clone: B6Ng01-124P05, 5' end.DH927723|Mus musculus domesticus DNA, BAC clone: B6Ng01-124P05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttcatccaaaaaccaaatcaaccaaccaaacaaacagaaaacaa
aacaaaacaacccagttttgtcaggctttggtgagggccttttttgggtt
tcagaggatgtcctttctgcttcatcctcacagagcacagagcaaattca
gcaatcttcctttttttctatactctctttcctaatttatttattcttct
ttcttatactaaatcctgactgcagtttcccccccgccctttcctgctca
tctcccctccaccttcccatcctccagatctcctcctcctctacctccct
tcagaaaagagcaggcctccaagggacatcaaccaaatatggtagtagtc
ttacatcaaggatgaacaaggcaacccagtagaagaaaaagggtcccaaa
ggctcatggatgaaatagacattgtcagaataaacccctggcatagatgt
ggtcaatctcatgtgtaatactacaagtgaatgggcctttaccaacaaag
atgcatgtaattatattcttttccaaacagtatcattttcgagtcataga
aacagacacgaaaaatgtgagttggcaggaaaactctcagaactccaccg
tgataccaattagaaacatgaaaaacaagaattggttgttcttttgacag
acaaattgaaaatagactgtgtgctttttagaagctgatgctatggtact
tctaatatttgatgcaactgcactgttcttgccagccgaaggctctcggt
gtggcagtactttttttttttttttttttaaagatttactttatgtatat
gagtacactgtcactgtcttcagacacaccagaagaaggcatcagatcct
attatagatggttgtgagccaccatgtgatttctgggaattgaactcagg
acttttggagagcagttggtgctcttaaccactgagcacaaggcatgctt
cttttatcctgctttgtcactacagatgtcacagtgggttcatagtagtc
actttgcatattattacacacgggaagttgaattttttttttttatagaa
aacagttaatttcaccatggttctgga
gaattcatcttcaagagagtgtcagagcatggctaaaatgtgtgcgcttt
cacaaaatgtaacaaaacaacaacaacaacaacaacaacaacaaaaatag
cctctaatccaattgctaatacaagccctcttcccatttgaaactccata
agaattgtctattgaggttttgtcttttactgtctgttgtgttgtcaagt
gtgggcccccaaaacccggagtctatacttagcccttgggaccctgcacc
caggttaattctaattggtgaataaagatgctgacagccaataggtgatc
agaagagacatagatggggtgtttcaggggcttggggagagacgaccacg
aggaggaaaggagcagaaagaagccgccatggaatagaagagagagccag
catgggagagctaagccgtaacagtgaaggctggccatgtaggctggcca
aacggacttaagagcagcccggatggagcataataaatagtaagtgataa
tttggggttatcaatgggaaagccggttctagcagcaccgagggtagaca
gctgccaaactattgtgctgcctaaggctatgtaaaaatataaggctgtg
tgtgtctttcatccaggaacgtaaatggtctaaggtgggaaagaggctgc
accatgatttttaacatttattactacagtagtcttttaaagtttgggtg
ttgggtcatggtgagagtacagttggctgaagaagtaagaagaggaaatc
agaccctccgggtctcgtatcaatggttacaagcaacccaaagtgggtgt
tggttgggagctgaaccccaagtctgctgcaaaaacggtacatgctccta
attgataagccatctcttccgctcagcattgtctttacatccacacttgt
aaggaaagtaagctctgctttctgcatacagcatactagggcttgtctag
cccacactttaatatctccacgtctccagaaatctataggggctaagatt
agttgatctcagaaaaagcccacttgaggtagcatttctgcattgctttt
ttctgtttctgtgaccaacttctgacagatccacccaatggaaggccatt
ttatttatttattttatcatggtacccgtctcaccatataggataccatg
ggggtgtggggctgcccttgccatacgatggacacccgcact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_36989984_36991073
seq2: B6Ng01-124P05.b_47_1123

seq1  GAATTCTTCATCCAAAAACCAAATCAACCAACCAAACAAACAGAAAACAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCATCCAAAAACCAAATCAACCAACCAAACAAACAGAAAACAA  50

seq1  AACAAAACAACCCAGTTTTGTCAGGCTTTGGTGAGGGCCTTTTTTGGGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAACAACCCAGTTTTGTCAGGCTTTGGTGAGGGCCTTTTTTGGGTT  100

seq1  TCAGAGGATGTCCTTTCTGCTTCATCCTCACAGAGCACAGAGCAAATTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGGATGTCCTTTCTGCTTCATCCTCACAGAGCACAGAGCAAATTCA  150

seq1  GCAATCTTCCTTTTTTTCTATACTCTCTTTCCTAATTTATTTATTCTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATCTTCCTTTTTTTCTATACTCTCTTTCCTAATTTATTTATTCTTCT  200

seq1  TTCTTATACTAAATCCTGACTGCAGTTTCCCCCCCGCCCTTTCCTGCTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTATACTAAATCCTGACTGCAGTTTCCCCCCCGCCCTTTCCTGCTCA  250

seq1  TCTCCCCTCCACCTTCCCATCCTCCAGATCTCCTCCTCCTCTACCTCCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCCTCCACCTTCCCATCCTCCAGATCTCCTCCTCCTCTACCTCCCT  300

seq1  TCAGAAAAGAGCAGGCCTCCAAGGGACATCAACCAAATATGGTAGTAGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAAAGAGCAGGCCTCCAAGGGACATCAACCAAATATGGTAGTAGTC  350

seq1  TTACATCAAGGATGAACAAGGCAACCCAGTAGAAGAAAAAGGGTCCCAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATCAAGGATGAACAAGGCAACCCAGTAGAAGAAAAAGGGTCCCAAA  400

seq1  GGCTCATGGATGAAATAGACATTGTCAGAATAAACCCCTGGCATAGATGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCATGGATGAAATAGACATTGTCAGAATAAACCCCTGGCATAGATGT  450

seq1  GGTCAATCTCATGTGTAATACTACAAGTGAATGGGCCTTTACCAACAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAATCTCATGTGTAATACTACAAGTGAATGGGCCTTTACCAACAAAG  500

seq1  ATGCATGTAATTATATTCTTTTCCAAACAGTATCATTTTCGAGTCATAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATGTAATTATATTCTTTTCCAAACAGTATCATTTTCGAGTCATAGA  550

seq1  AACAGACACGAAAAATGTGAGTTGGCAGGAAAACTCTCAGAACTCCACCG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGACACGAAAAATGTGAGTTGGCAGGAAAACTCTCAGAACTCCACCG  600

seq1  TGATACCAATTAGAAACATGAAAAACAAGAATTGGTTGTTCTTTTGACAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATACCAATTAGAAACATGAAAAACAAGAATTGGTTGTTCTTTTGACAG  650

seq1  ACAAATTGAAAATAGACTGTGTGCTTTTTAGAAGCTGATGCTATGGTACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATTGAAAATAGACTGTGTGCTTTTTAGAAGCTGATGCTATGGTACT  700

seq1  TCTAATATTTGATGCAACTGCACTGTTCTTGCCAGCCGAAGGCTCTCGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATATTTGATGCAACTGCACTGTTCTTGCCAGCCGAAGGCTCTCGGT  750

seq1  GTGGCAGTAC--TTTTTTTTTTTTTTTTTAAAGATTTACTTTATGTATAT  798
      ||||||||||  ||||||||||||||||||||||||||||||||||||||
seq2  GTGGCAGTACTTTTTTTTTTTTTTTTTTTAAAGATTTACTTTATGTATAT  800

seq1  GAGTACACTGTCACTGTCTTCAGACACACCAGAAGAAGGCATCAGATCCT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTACACTGTCACTGTCTTCAGACACACCAGAAGAAGGCATCAGATCCT  850

seq1  ATTATAGATGGTTGTGAGCCACCATGTGATTTCTGGGAATTGAACTCAGG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAGATGGTTGTGAGCCACCATGTGATTTCTGGGAATTGAACTCAGG  900

seq1  ACTTTTGGAAGAGCAGTTGGTGCTCTTAACCACTGAGCCACAAGGCATGC  948
      |||||||| |||||||||||||||||||||||||||| ||||||||||||
seq2  ACTTTTGG-AGAGCAGTTGGTGCTCTTAACCACTGAG-CACAAGGCATGC  948

seq1  TTCTTTTATCCTGCTTTGTCACCTACAAGATGTCCACAGTGGGTGTCATA  998
      ||||||||||||||||||||| |||| |||||| |||||||||| |||||
seq2  TTCTTTTATCCTGCTTTGTCA-CTAC-AGATGT-CACAGTGGGT-TCATA  994

seq1  GTAGTCCACTTTGCATTATTATAACAACACCGGAAGTTGGATTTTTTTTT  1048
      ||||| ||||||||| |||||| || |||| ||||||| || ||||||||
seq2  GTAGT-CACTTTGCA-TATTATTAC-ACACGGGAAGTT-GAATTTTTTTT  1040

seq1  TTTTATAAGAAAACAAGGTTTATTTTCACCCATGGTTCTGGA  1090
      |||||| ||||||||    ||| ||||| |||||||||||||
seq2  TTTTAT-AGAAAACA---GTTAATTTCA-CCATGGTTCTGGA  1077