BAC Information

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BAC

Clone NameB6Ng01-126I06
Chromosome12 (Build37)
Map Location 62,709,283 - 62,710,259
singlet/doubletsinglet
Overlap geneLrfn5
Upstream geneLOC100040300, LOC665677, Nanog-ps2, LOC665699
Downstream geneLOC665707, LOC100040403, LOC665713, LOC622746, LOC100040438
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-126I06.bB6Ng01-126I06.g
ACCDH928866DH928867
length1,169969
definitionDH928866|Mus musculus domesticus DNA, BAC clone: B6Ng01-126I06, 5' end.DH928867|Mus musculus domesticus DNA, BAC clone: B6Ng01-126I06, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaataccaaatgcctgagaagctcctaaaggaaag
ttcgacatccttagtcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcataccatttagaatggttaagatcaggtgacagtagatggtg
gtgaggatgtggaaagagaggaacactcctccattgctcatcagaatgaa
agctggtacaaccactctagaaatcagtttgttggttcctcagaaatgtg
gacaaagtactacctgaggacccaactataccagtcctgggcatgtactc
caaagatgctccaaaatattatgaggacacatgctcatagcagccttatt
tataatatccagaagctggaaagaacccagatgtccctcatcagaggaat
ggatacagaaaatgtggtacatttacacagtggaatactactcagctatt
aaaaaccatgaattcgtgaaatctttaggcaaatggatggaactagaaaa
tattatcctgagtaaggtaatcttaaaagaacatacatggtatgcactca
ctgataagtggatattagcccaaacgttcagaagacccaaggtacaattc
atagaccatgtgaagctcaagaaggaagaaaaaagcatggatgcttcagt
acttcttagaagagggaacaaaatacttaagggagaaaataaggaaacaa
aatatggagcagagactgaaggaaaggccatccagagactaccaaacctg
gggatctatcccacatacagccaccaaacccagacactattgtggttgcc
aagaagtgcttgtttataggagcctgatacagaatctgtcttctgagagg
ctctgccaaagcctgacaaatgcaaacgggaatactcttaggcaaccatt
ggactgagcacagtatccacaatggaagattagagaaaggactgacagat
agaggtgtttgcaacccataggaacacatatcaccactagaagcccagga
tctccagagctaaatcatcacaagagtactcattgaggaccatgcttcag
ctgcatatgttaacagaggtgtcttatgaaatcaatgggagaaaacctag
tctggagctcaatactacggaaggaattatgctaggttggagcaggaagc
gtggtttggctctgggttg
gaattcacaaagctcagtgcgggtcaacagggccagttgatgtttgagaa
ttaaaaaaaaaaaaaaaagccgaaagatgagaacaaactgccagagttag
gttgaagacaagcagagcaattcagtgagaagctgagagaactgggattg
aatccatctactgaagaggagtttgagccagaacatctgagttgacccaa
ccattcaaaagaaccataaagactgaatttattcagcagtaagcctctaa
gacaacaattccatcaggcaattaaatgttacttttacaaaaatggagtt
tagaaatgaacacagacgctagtaaataactgtcattcaacgaaggcacc
aaaatcaactgactgggcagaagatacttgcattaaaataaatacctgat
tcaaatggatatttattatatagtaaaaaatgtacctcaaatgataaatg
accctccacacacaatgggattcttgccatctcagaaaaaaaaaaaaaga
tttcttaaacaagatgaaaaaaaatgaaaaaagttcaatagacattgaat
aaatttgactcactgtcttcttcattctaaaactatctgacttaagaaaa
ggcaccgtagtgaaaattataactttgtcagtgtttggaagactacaata
gatagagataaatatctactaaagaatacatgaccaggttctcaagcaaa
attgtaataagttaacaataaacacatgaaccataagcagttaacattgt
tgatagaatagaaaggaatttaaagataagtgtgagaaaaatatgaacta
catttagccatacaaatagtattgtggcacaatttacaaaacatcttacc
agttttctataacttttgatatacactgtagacatgttttaatctaggta
tttatccagagaatggaaaaagtaggtatacaaaatagcttatgaaatgt
ggaacatcattttttaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_62709283_62710259
seq2: B6Ng01-126I06.g_70_1038 (reverse)

seq1  TTTTATAAAAATGGTGTTTCCACATTTTCATAAGCTATTTTGTATACCTA  50
      ||||| ||||||| || ||||||| |||||||||||||||||||||||||
seq2  TTTTA-AAAAATGATG-TTCCACA-TTTCATAAGCTATTTTGTATACCTA  47

seq1  CTTTTTCCATTCTCTGGAATAAATACCTAGGATTAAAAACATTGTCTACA  100
      ||||||||||||||||| ||||||||||| |||| |||||| ||||||||
seq2  CTTTTTCCATTCTCTGG-ATAAATACCTA-GATT-AAAACA-TGTCTACA  93

seq1  GTGTATATCAAAAGTTATAGAAAACTGGTAAGATTGTTTTGTAAATTGTG  150
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GTGTATATCAAAAGTTATAGAAAACTGGTAAGA-TGTTTTGTAAATTGTG  142

seq1  CCACAATACTATTTGTATGGCTAAATGTAGTTCATATTTTTCTCACACTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAATACTATTTGTATGGCTAAATGTAGTTCATATTTTTCTCACACTT  192

seq1  ATCTTTAAATTCCTTTCTATTCTATCAACAATGTTAACTGCTTATGGTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTAAATTCCTTTCTATTCTATCAACAATGTTAACTGCTTATGGTTC  242

seq1  ATGTGTTTATTGTTAACTTATTACAATTTTGCTTGAGAACCTGGTCATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTTTATTGTTAACTTATTACAATTTTGCTTGAGAACCTGGTCATGT  292

seq1  ATTCTTTAGTAGATATTTATCTCTATCTATTGTAGTCTTCCAAACACTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTTAGTAGATATTTATCTCTATCTATTGTAGTCTTCCAAACACTGA  342

seq1  CAAAGTTATAATTTTCACTACGGTGCCTTTTCTTAAGTCAGATAGTTTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTTATAATTTTCACTACGGTGCCTTTTCTTAAGTCAGATAGTTTTA  392

seq1  GAATGAAGAAGACAGTGAGTCAAATTTATTCAATGTCTATTGAACTTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAAGAAGACAGTGAGTCAAATTTATTCAATGTCTATTGAACTTTTT  442

seq1  TCATTTTTTTTCATCTTGTTTAAGAAATCTTTTTTTTTTTTTCTGAGATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTTTTTCATCTTGTTTAAGAAATCTTTTTTTTTTTTTCTGAGATG  492

seq1  GCAAGAATCCCATTGTGTGTGGAGGGTCATTTATCATTTGAGGTACATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGAATCCCATTGTGTGTGGAGGGTCATTTATCATTTGAGGTACATTT  542

seq1  TTTACTATATAATAAATATCCATTTGAATCAGGTATTTATTTTAATGCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTATATAATAAATATCCATTTGAATCAGGTATTTATTTTAATGCAA  592

seq1  GTATCTTCTGCCCAGTCAGTTGATTTTGGTGCCTTCGTTGAATGACAGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCTTCTGCCCAGTCAGTTGATTTTGGTGCCTTCGTTGAATGACAGTT  642

seq1  ATTTACTAGCGTCTGTGTTCATTTCTAAACTCCATTTTTGTAAAAGTAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACTAGCGTCTGTGTTCATTTCTAAACTCCATTTTTGTAAAAGTAAC  692

seq1  ATTTAATTGCCTGATGGAATTGTTGTCTTAGAGGCTTACTGCTGAATAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAATTGCCTGATGGAATTGTTGTCTTAGAGGCTTACTGCTGAATAAA  742

seq1  TTCAGTCTTTATGGTTCTTTTGAATGGTTGGGTCAACTCAGATGTTCTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTCTTTATGGTTCTTTTGAATGGTTGGGTCAACTCAGATGTTCTGG  792

seq1  CTCAAACTCCTCTTCAGTAGATGGATTCAATCCCAGTTCTCTCAGCTTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAACTCCTCTTCAGTAGATGGATTCAATCCCAGTTCTCTCAGCTTCT  842

seq1  CACTGAATTGCTCTGCTTGTCTTCAACCTAACTCTGGCAGTTTGTTCTCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAATTGCTCTGCTTGTCTTCAACCTAACTCTGGCAGTTTGTTCTCA  892

seq1  TCTTTCGGCTTTTTTTTTTTTTTTTAATTCTCAAACATCAACTGGCCCTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCGGCTTTTTTTTTTTTTTTTAATTCTCAAACATCAACTGGCCCTG  942

seq1  TTGACCCGCACTGAGCTTTGTGAATTC  977
      |||||||||||||||||||||||||||
seq2  TTGACCCGCACTGAGCTTTGTGAATTC  969