BAC Information

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BAC

Clone NameB6Ng01-127H03
Chromosome12 (Build37)
Map Location 26,010,198 - 26,011,246
singlet/doubletsinglet
Overlap genenone
Upstream geneEG668711, EG668714, LOC629364, Taf1b, Grhl1, EG629383, Klf11, Cys1, Rrm2, LOC668719, Mboat2, EG629397, C330002I19Rik, Id2
Downstream geneLOC100042973, LOC100042974, LOC668726, Rnf144
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-127H03.bB6Ng01-127H03.g
ACCDH929561DH929562
length351878
definitionDH929561|Mus musculus domesticus DNA, BAC clone: B6Ng01-127H03, 5' end.DH929562|Mus musculus domesticus DNA, BAC clone: B6Ng01-127H03, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tggattgctgttaacctgcaagagcctgactaccgctttccaagtgttac
tgaagagatgaagaagtgaatccacacatacacaaaggtcttttctcaac
cctgtattgtttgaggtccaattttcttcacatgctgcaggtaaatggca
gaattctacagcctgaccttagctagaaccagctggttgctggtgagtga
gatgtttaggagctctggataagcacggggcattttttttgttctcactg
gtgctttgaagaatagttattctggaaatataaaatgtatttaggtgtgt
aatggatttagttgtggctatgatcaattaatttggggggggggtgcagg
a
gaattcagatacagtggtctgacatgacaggatgtcaaagggaaaagggc
tcaggaagccatggcccagcaaccgcagaaggtagacaagcagtagagct
ttgaaaagatgtgaagagagagaggtagggctatccagaggcaaggacca
cactgccagcatcttgggatgcagacaacctgcaagaaacccagtagaga
catgccaatgaaaaacagaagcatgaggaaaaggaaataagcagagggtt
aaggagggctacaaaagaggaagcaagggagacagagcacagcagtcact
gtgtgccctgtcagtgtgccacggagagagacagagaagagcacaggcct
ggatagtgacagagacacatacagaattggggagacggacaaagagaagc
cgagagaccagtgcagagacagagacattcacacagagggacttggagag
agagagagagagagagagagagagagagagagagagagagagaagcaagg
agtcagagactaagagatagagacacaatacgcagagacagagatgcaga
aaaacagaaagacagagaaagatggacacagaattggcacagacaaggac
catgacctacagaaaagacacagaaacagagatgctgcagagacagggag
cattaggagacctttcagaaataaaagctgttaatttacagaagcaaaat
gtaagccctgaggaaatttgacagaacaggatcaaaaaattgataggaaa
ttaaactgcaaaatgaataccaaaagccctaccattgggaaacttaaggc
cctttctcaatcacagaccggatgaaaatccagctggaattggactcaaa
tacgcaaaagtattactgaatggctctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_26010198_26011246
seq2: B6Ng01-127H03.g_69_946 (reverse)

seq1  CAGAGCCACGTCTATAATTCTCTTCCCTATTTTATCCATCTTCTGTCATC  50
                                                        
seq2  --------------------------------------------------  0

seq1  TTTCTTTTGATGAGGTATTCACATGTATGCTTCATTTATTAATGTGTGTG  100
                                                        
seq2  --------------------------------------------------  0

seq1  CTTATGGCTGTTCATTTCTTCTCTGATCTACGCTCTGAATATGAGCAATC  150
                                                        
seq2  --------------------------------------------------  0

seq1  AATTAGTTCCAGCGCAGAGCATTTCAGTTACTACTTTTGCCTATTTGTAG  200
                    ||||||  ||||| || ||||||||| |||||| ||
seq2  --------------CAGAGCCATTCAG-TAATACTTTTGCGTATTTG-AG  34

seq1  TCCAATTCCAGCTTGGATTTTTCAT-CTGTCTGTGAATTGAGAAAGGGCC  249
      |||||||||||| |||| ||||||| | ||||||| ||||||||||||||
seq2  TCCAATTCCAGC-TGGA-TTTTCATCCGGTCTGTG-ATTGAGAAAGGGCC  81

seq1  TTTAAGTTTCCCAATGGTAGGGCTTTTGGTATTCATTTTTGCAAGTTAAT  299
       |||||||||||||||||||||||||||||||||| |||||||  |||||
seq2  -TTAAGTTTCCCAATGGTAGGGCTTTTGGTATTCA-TTTTGCAGTTTAAT  129

seq1  TTCCTTATCAA-TTTCTGATCCTGTTCTGTCAAATTTCCTCAGGGCTTAC  348
      |||| |||||| ||| ||||||||||||||||||||||||||||||||||
seq2  TTCC-TATCAATTTTTTGATCCTGTTCTGTCAAATTTCCTCAGGGCTTAC  178

seq1  ATTTTGCTTCTGTAAATTAACAGCTTTTATTTCTGAAAGGTCTCCTAATG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGCTTCTGTAAATTAACAGCTTTTATTTCTGAAAGGTCTCCTAATG  228

seq1  CTCCCTGTCTCTGCAGCATCTCTGTTTCTGTGTCTTTTCTGTAGGTCATG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTGTCTCTGCAGCATCTCTGTTTCTGTGTCTTTTCTGTAGGTCATG  278

seq1  GTCCTTGTCTGTGCC-ATTCTGTGTCCATCTTTCTCTGTCTTTCTGTTTT  497
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GTCCTTGTCTGTGCCAATTCTGTGTCCATCTTTCTCTGTCTTTCTGTTTT  328

seq1  TCTGCATCTCTGTCTCTGCGTATTGTGTCTCTATCTCTTAGTCTCTGACT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCATCTCTGTCTCTGCGTATTGTGTCTCTATCTCTTAGTCTCTGACT  378

seq1  CCTTGCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  597
      |||||||  |||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGCT--TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  426

seq1  CTCTCTCCAAGTCCCTCTGTGTGAATGTCTCTGTCTCTGCACTGGTCTCT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCCAAGTCCCTCTGTGTGAATGTCTCTGTCTCTGCACTGGTCTCT  476

seq1  CGGCTTCTCTTTGTCCGTCTCCCCAATTCTGTATGTGTCTCTGTCACTAT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCTTCTCTTTGTCCGTCTCCCCAATTCTGTATGTGTCTCTGTCACTAT  526

seq1  CCAGGCCTGTGCTCTTCTCTGTCTCTCTCCGTGGCACACTGACAGGGCAC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCCTGTGCTCTTCTCTGTCTCTCTCCGTGGCACACTGACAGGGCAC  576

seq1  ACAGTGACTGCTGTGCTCTGTCTCCCTTGCTTCCTCTTTTGTAGCCCTCC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGACTGCTGTGCTCTGTCTCCCTTGCTTCCTCTTTTGTAGCCCTCC  626

seq1  TTAACCCTCTGCTTATTTCCTTTTCCTCATGCTTCTGTTTTTCATTGGCA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACCCTCTGCTTATTTCCTTTTCCTCATGCTTCTGTTTTTCATTGGCA  676

seq1  TGTCTCTACTGGGTTTCTTGCAGGTTGTCTGCATCCCAAGATGCTGGCAG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCTACTGGGTTTCTTGCAGGTTGTCTGCATCCCAAGATGCTGGCAG  726

seq1  TGTGGTCCTTGCCTCTGGATAGCCCTACCTCTCTCTCTTCACATCTTTTC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTCCTTGCCTCTGGATAGCCCTACCTCTCTCTCTTCACATCTTTTC  776

seq1  AAAGCTCTACTGCTTGTCTACCTTCTGCGGTTGCTGGGCCATGGCTTCCT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTCTACTGCTTGTCTACCTTCTGCGGTTGCTGGGCCATGGCTTCCT  826

seq1  GAGCCCTTTTCCCTTTGACATCCTGTCATGTCAGACCACTGTATCTGAAT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCCTTTTCCCTTTGACATCCTGTCATGTCAGACCACTGTATCTGAAT  876

seq1  TC  1049
      ||
seq2  TC  878